Symbol:
Slc35a2
Name:
solute carrier family 35 member A2
RGD ID:
2293497
Description:
Predicted to enable UDP-galactose transmembrane transporter activity. Predicted to be involved in UDP-galactose transmembrane transport. Predicted to be located in Golgi apparatus; endoplasmic reticulum; and nucleoplasm. Predicted to be active in Golgi membrane. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type IIm. Orthologous to human SLC35A2 (solute carrier family 35 member A2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; Soman.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
MGC188623; solute carrier family 35 (UDP-galactose transporter), member A2; solute carrier family 35, member A2; UDP-galactose translocator
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 X 17,280,072 - 17,288,928 (-) NCBI GRCr8 mRatBN7.2 X 14,608,145 - 14,616,937 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl X 14,608,055 - 14,616,678 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx X 19,421,690 - 19,430,223 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 X 20,652,888 - 20,661,421 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 X 16,918,058 - 16,926,591 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 X 15,453,184 - 15,461,990 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl X 15,453,186 - 15,461,713 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 X 16,234,419 - 16,243,248 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 X 26,642,694 - 26,651,223 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera X 14,692,902 - 14,701,423 (-) NCBI Celera Cytogenetic Map X q12 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Slc35a2 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 X 17,280,072 - 17,288,928 (-) NCBI GRCr8 mRatBN7.2 X 14,608,145 - 14,616,937 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl X 14,608,055 - 14,616,678 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx X 19,421,690 - 19,430,223 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 X 20,652,888 - 20,661,421 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 X 16,918,058 - 16,926,591 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 X 15,453,184 - 15,461,990 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl X 15,453,186 - 15,461,713 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 X 16,234,419 - 16,243,248 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 X 26,642,694 - 26,651,223 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera X 14,692,902 - 14,701,423 (-) NCBI Celera Cytogenetic Map X q12 NCBI
SLC35A2 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 X 48,903,183 - 48,911,958 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl X 48,903,180 - 48,911,958 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 X 48,760,460 - 48,769,235 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 X 48,645,403 - 48,654,179 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 X 48,516,706 - 48,525,165 NCBI Celera X 52,894,294 - 52,903,071 (+) NCBI Celera Cytogenetic Map X p11.23 NCBI HuRef X 46,416,492 - 46,425,389 (-) NCBI HuRef CHM1_1 X 48,791,601 - 48,800,377 (-) NCBI CHM1_1 T2T-CHM13v2.0 X 48,313,659 - 48,322,434 (-) NCBI T2T-CHM13v2.0
Slc35a2 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 X 7,750,189 - 7,760,699 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl X 7,750,267 - 7,760,731 (+) Ensembl GRCm39 Ensembl GRCm38 X 7,883,921 - 7,894,492 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl X 7,884,028 - 7,894,492 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 X 7,461,370 - 7,471,618 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 X 7,041,203 - 7,051,364 (+) NCBI MGSCv36 mm8 Celera X 3,575,406 - 3,585,656 (-) NCBI Celera Cytogenetic Map X A1.1 NCBI cM Map X 3.56 NCBI
Slc35a2 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955543 434,405 - 443,508 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955543 434,265 - 443,460 (-) NCBI ChiLan1.0 ChiLan1.0
SLC35A2 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 X 50,392,307 - 50,400,854 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 X 50,395,823 - 50,405,546 (-) NCBI NHGRI_mPanPan1 PanPan1.1 Ensembl X 49,058,622 - 49,067,821 (-) Ensembl panpan1.1 panPan2
SLC35A2 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 X 42,060,568 - 42,071,330 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl X 42,052,781 - 42,071,012 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha X 16,437,676 - 16,446,449 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 X 42,196,798 - 42,207,560 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl X 42,186,311 - 42,207,558 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 X 42,184,671 - 42,193,444 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 X 42,172,953 - 42,181,735 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 X 42,267,160 - 42,275,933 (-) NCBI UU_Cfam_GSD_1.0
Slc35a2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
SLC35A2 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl X 42,981,802 - 42,992,081 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 X 42,981,801 - 42,992,091 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 X 47,820,828 - 47,831,636 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
SLC35A2 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 X 46,020,241 - 46,030,205 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl X 46,017,681 - 46,030,200 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666076 11,505,352 - 11,516,839 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Slc35a2 (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 295 Count of miRNA genes: 187 Interacting mature miRNAs: 222 Transcripts: ENSRNOT00000063952 Prediction methods: Microtar, Miranda, Pita, Rnahybrid, Targetscan Result types: miRGate_prediction
70165 Bp64 Blood pressure QTL 64 5.2 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) X 1448129 31706553 Rat 1298071 Edpm12 Estrogen-dependent pituitary mass QTL 12 3.2 pituitary gland mass (VT:0010496) pituitary gland wet weight (CMO:0000853) X 2927898 47927898 Rat 731181 Uae27 Urinary albumin excretion QTL 27 2.7 0.0059 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) X 1 43491017 Rat 10755455 Coatc13 Coat color QTL 13 0 coat/hair pigmentation trait (VT:0010463) pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) 7 4406000 49406000 Rat 631666 Iddm5 Insulin dependent diabetes mellitus QTL 5 blood glucose amount (VT:0000188) plasma glucose level (CMO:0000042) X 4494549 49494549 Rat 634325 Bw13 Body weight QTL 13 0 body mass (VT:0001259) body weight (CMO:0000012) X 1447972 20991088 Rat 631204 Gluco15 Glucose level QTL 15 0.001 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) X 1623715 22646544 Rat
RH129124
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 X 14,608,605 - 14,608,806 (+) MAPPER mRatBN7.2 Rnor_6.0 X 15,453,645 - 15,453,845 NCBI Rnor6.0 Rnor_5.0 X 16,234,880 - 16,235,080 UniSTS Rnor5.0 RGSC_v3.4 X 26,643,155 - 26,643,355 UniSTS RGSC3.4 Celera X 14,693,363 - 14,693,563 UniSTS RH 3.4 Map X 142.6 UniSTS Cytogenetic Map X q13 UniSTS
RH129463
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 18 78,340,697 - 78,340,885 (-) MAPPER mRatBN7.2 mRatBN7.2 X 14,607,753 - 14,607,946 (+) MAPPER mRatBN7.2 Rnor_6.0 X 15,452,793 - 15,452,985 NCBI Rnor6.0 Rnor_5.0 X 16,234,028 - 16,234,220 UniSTS Rnor5.0 RGSC_v3.4 X 26,642,303 - 26,642,495 UniSTS RGSC3.4 Celera X 14,692,511 - 14,692,703 UniSTS RH 3.4 Map 8 433.8 UniSTS Cytogenetic Map X q13 UniSTS
UniSTS:547084
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 X 14,609,390 - 14,610,337 (+) MAPPER mRatBN7.2 Rnor_6.0 X 15,454,430 - 15,455,376 NCBI Rnor6.0 Rnor_5.0 X 16,235,665 - 16,236,611 UniSTS Rnor5.0 Celera X 14,694,148 - 14,695,094 UniSTS Cytogenetic Map X q13 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000063952 ⟹ ENSRNOP00000061970
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl X 14,608,055 - 14,616,678 (-) Ensembl Rnor_6.0 Ensembl X 15,453,186 - 15,461,713 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000096381 ⟹ ENSRNOP00000079603
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl X 14,608,920 - 14,616,678 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000100331 ⟹ ENSRNOP00000088418
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl X 14,608,588 - 14,615,891 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000115934 ⟹ ENSRNOP00000077125
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl X 14,608,588 - 14,616,662 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000118297 ⟹ ENSRNOP00000094158
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl X 14,608,588 - 14,616,662 (-) Ensembl
RefSeq Acc Id:
NM_001127642 ⟹ NP_001121114
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 X 17,280,076 - 17,288,613 (-) NCBI mRatBN7.2 X 14,608,149 - 14,616,686 (-) NCBI Rnor_6.0 X 15,453,184 - 15,461,713 (-) NCBI Rnor_5.0 X 16,234,419 - 16,243,248 (-) NCBI RGSC_v3.4 X 26,642,694 - 26,651,223 (-) RGD Celera X 14,692,902 - 14,701,423 (-) RGD
Sequence:
CGGGCAGATGCCAACATGGCAGCGGTTGGGGTTGGCGGATCTACCGCTGCGGCCGGGGCAGGGGCTGTGTCCGCGGGCGCGTTGGAACCTGGATCTGCTACAGCGGCTCACCGGCGCCTCAAGTATAT ATCCTTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCATCCTCAGCATCCGCTATGCTCGCACACTGCCTGGGGACCGCTTCTTTGCCACCACTGCTGTGGTCATGGCTGAAGTGCTCAAAGGTCTCA CCTGTCTCCTGCTGCTCTTCGCACAAAAGAGGGGGAATGTGAAGCACCTGGTCCTCTTCCTTCACGAGGCTGTCCTGGTGCAATATGTCGACACACTGAAGCTCGCGGTGCCCTCTCTCATCTATACC TTGCAGAATAACCTCCAGTATGTTGCCATCTCCAACCTGCCAGCTGCCACTTTCCAGGTGACGTATCAGCTGAAGATCCTGACTACAGCACTGTTCTCGGTGCTTATGTTGAATCGCAGCCTCTCACG CCTGCAGTGGGCCTCTCTGCTACTGCTCTTCACTGGTGTCGCCATTGTCCAGGCACAGCAAGCTGGTGGGAGTGGCCCACGGCCACTGGATCAGAACCCGGGGGTGGGCTTAGCAGCTGTTGTGGCCT CCTGTCTCTCCTCAGGCTTTGCTGGTGTCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGTTCTGTGTGGCTGCGCAACCTCCAGCTCGGCCTCTTTGGCACAGCGCTGGGCCTGGTGGGGCTCTGG TGGGCTGAGGGCACTGCCGTGGCCAGTCAAGGCTTCTTCTTTGGGTACACACCTGCTGTCTGGGGTGTCGTACTAAACCAAGCCTTCGGTGGGCTCCTGGTGGCTGTTGTTGTCAAGTATGCTGACAA CATCCTCAAGGGCTTTGCCACCTCCCTGTCCATTGTGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCTTCCACCTGGACCCATTATTTGCCCTGGGTGCAGGGCTCGTCATTGGTGCCGTCTACC TCTACAGCCTTCCCCGAGGTGCAGTCAAAGCCATAGCCTCTGCCTCTGCCTCTGCCTCTGGGCCGTGCATTCACCAGCAGCCTCCTGGGCAGCCACCACCACCGCAGCTGTCTTCCCGAGGAGACCTC ATCACGGAGCCCTTTCTGCCAAAGTCAGTGCTGGTGAAGTGAGAGCTGGTGGTGGTTGGGGAAACAGGGCAGGGGGTTGGGTTGGAGGGGGTTGGGCTTCTGCAGGTCCTGCAGGTTGTCGCCAGGGC CTGACTCTTGTGGGGTTGGAGGTTTTTTTTCTCCCGTACTTCTAAAGGGATATGGAGCTAGGGCTGAATGTCACATGAACGCTTCCTGATAGATGGACTCCCCTCTCCTGGAGGAGCTTTTTAGAGCT GCTTCCTCTGCCTCGGGCTAACCTCTTTGGGAACAGGGGTTGGGGTACTGCTATTTCAGGCCTCTCCCTCACGACCCTCTGCTGGAGATGTCCTGTCTCACATGCCTGGGACAGTTCATCCCAGCCAT CCTGCTGACTGGACAAAAGCCCCGCAGCTCTTCAGTAACGACTAATGACTACTCGTGGGGTTCCATTTCCTATTGTATGAGGCCTTCTCTCCTGCACCATCACCCTGGATCATGACAACAGCTTGGTC TCTGATGTGGCTTTGGGCCAGTTTCCCTGGTACAGAGACCCTTGAAGATCAATCAGCCTGTTGTTGCTCACCAAGGTGAAGGGCTCGTAGCTGCTGGAATTGAAGACGCTGGCCTGCCTTCGTTCTCC CTTCTTGCCCTGGCCCAGCTGGGACTAAACTCTTATCAGTATTAGGGGTAGGGTGAGGTAGACATGGAACTAACTCCCTGTCCCCACCAACCCTGCCCCACGTAGGGCTGACATGACTGACTAACCTC TGTTAATGGGCCCACCTCAACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGCAAATAAAATGTGTTTTGCATCTTGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
hide sequence
RefSeq Acc Id:
XM_039099384 ⟹ XP_038955312
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 X 17,280,072 - 17,288,928 (-) NCBI mRatBN7.2 X 14,608,145 - 14,616,937 (-) NCBI
RefSeq Acc Id:
NP_001121114 ⟸ NM_001127642
- UniProtKB:
F7FFH4 (UniProtKB/TrEMBL), A6KP68 (UniProtKB/TrEMBL), A0A8I5Y5Y5 (UniProtKB/TrEMBL), B2RYK5 (UniProtKB/TrEMBL)
- Sequence:
MAAVGVGGSTAAAGAGAVSAGALEPGSATAAHRRLKYISLAVLVVQNASLILSIRYARTLPGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNNL QYVAISNLPAATFQVTYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGSGPRPLDQNPGVGLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLWWAEGT AVASQGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHLDPLFALGAGLVIGAVYLYSLPRGAVKAIASASASASGPCIHQQPPGQPPPPQLSSRGDLITEPF LPKSVLVK
hide sequence
Ensembl Acc Id:
ENSRNOP00000061970 ⟸ ENSRNOT00000063952
RefSeq Acc Id:
XP_038955312 ⟸ XM_039099384
- Peptide Label:
isoform X1
- UniProtKB:
A0A8I5Y5Y5 (UniProtKB/TrEMBL), B2RYK5 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSRNOP00000088418 ⟸ ENSRNOT00000100331
Ensembl Acc Id:
ENSRNOP00000079603 ⟸ ENSRNOT00000096381
Ensembl Acc Id:
ENSRNOP00000094158 ⟸ ENSRNOT00000118297
Ensembl Acc Id:
ENSRNOP00000077125 ⟸ ENSRNOT00000115934
RGD ID: 13701741
Promoter ID: EPDNEW_R12263
Type: multiple initiation site
Name: Slc35a2_1
Description: solute carrier family 35 member A2
SO ACC ID: SO:0000170
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Experiment Methods: Single-end sequencing.
Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 X 15,461,708 - 15,461,768 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2016-03-09
Slc35a2
solute carrier family 35 member A2
Slc35a2
solute carrier family 35 (UDP-galactose transporter), member A2
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2008-05-30
Slc35a2
solute carrier family 35, member A2
Symbol and Name status set to provisional
70820
PROVISIONAL