Mpnd (MPN domain containing) - Rat Genome Database

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Gene: Mpnd (MPN domain containing) Rattus norvegicus
Analyze
Symbol: Mpnd
Name: MPN domain containing
RGD ID: 1589335
Description: Predicted to enable metallopeptidase activity and polyubiquitin modification-dependent protein binding activity. Predicted to be involved in double-strand break repair. Predicted to be part of BRCA1-A complex and BRISC complex. Orthologous to human MPND (MPN domain containing); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; cobalt dichloride.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC681944; similar to CG4751-PA
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr89926,714 - 933,620 (+)NCBIGRCr8
mRatBN7.29839,473 - 846,446 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl9840,143 - 846,439 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx91,287,342 - 1,293,596 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.096,633,888 - 6,640,137 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.095,592,377 - 5,598,632 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0911,055,370 - 11,061,611 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl911,055,371 - 11,061,611 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0910,040,659 - 10,047,589 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera97,660,577 - 7,666,824 (-)NCBICelera
Cytogenetic Map9q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MpndRatCOVID-19  ISOMPND (Homo sapiens)9068941mRNA:increased expression:peripheral blood mononuclear cell (human)RGDPMID:32228226 and REF_RGD_ID:28912744
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MpndRatamenorrhea  ISOMPND (Homo sapiens)8554872ClinVar Annotator: match by term: Primary amenorrheaClinVarPMID:21681106

1 to 20 of 44 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MpndRat(1->4)-beta-D-glucan multiple interactionsISOMpnd (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of MPND mRNACTDPMID:36331819
MpndRat1,2-dimethylhydrazine multiple interactionsISOMpnd (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of MPND mRNACTDPMID:22206623
MpndRat17alpha-ethynylestradiol affects expressionISOMpnd (Mus musculus)6480464Ethinyl Estradiol affects the expression of MPND mRNACTDPMID:17555576
MpndRat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOMpnd (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of MPND mRNACTDPMID:21570461 and PMID:24680724
MpndRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of MPND mRNACTDPMID:33387578
MpndRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOMpnd (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased expression of MPND mRNACTDPMID:26290441
MpndRat2-hydroxypropanoic acid decreases expressionISOMPND (Homo sapiens)6480464Lactic Acid results in decreased expression of MPND mRNACTDPMID:30851411
MpndRatacrylamide decreases expressionISOMPND (Homo sapiens)6480464Acrylamide results in decreased expression of MPND mRNACTDPMID:32763439
MpndRataflatoxin B1 affects expressionISOMPND (Homo sapiens)6480464Aflatoxin B1 affects the expression of MPND proteinCTDPMID:20106945
MpndRataflatoxin B1 decreases expressionISOMPND (Homo sapiens)6480464Aflatoxin B1 results in decreased expression of MPND mRNACTDPMID:27153756
MpndRataristolochic acid A decreases expressionISOMPND (Homo sapiens)6480464aristolochic acid I results in decreased expression of MPND mRNACTDPMID:33212167
MpndRatatrazine decreases expressionISOMPND (Homo sapiens)6480464Atrazine results in decreased expression of MPND mRNACTDPMID:22378314
MpndRatbenzo[a]pyrene decreases expressionISOMPND (Homo sapiens)6480464Benzo(a)pyrene results in decreased expression of MPND mRNACTDPMID:20106945 and PMID:32234424
MpndRatbenzo[e]pyrene decreases methylationISOMPND (Homo sapiens)6480464benzo(e)pyrene results in decreased methylation of MPND intronCTDPMID:30157460
MpndRatbeta-lapachone decreases expressionISOMPND (Homo sapiens)6480464beta-lapachone results in decreased expression of MPND mRNACTDPMID:38218311
MpndRatbis(2-ethylhexyl) phthalate increases expressionISOMpnd (Mus musculus)6480464Diethylhexyl Phthalate results in increased expression of MPND mRNACTDPMID:33754040
MpndRatbisphenol A affects expressionEXP 6480464bisphenol A affects the expression of MPND mRNACTDPMID:25181051
MpndRatbisphenol A increases expressionISOMpnd (Mus musculus)6480464bisphenol A results in increased expression of MPND mRNACTDPMID:32156529 and PMID:33221593
MpndRatbisphenol A increases methylationEXP 6480464bisphenol A results in increased methylation of MPND geneCTDPMID:28505145
MpndRatclofibrate decreases expressionISOMpnd (Mus musculus)6480464Clofibrate results in decreased expression of MPND mRNACTDPMID:23811191

1 to 20 of 44 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MpndRatdouble-strand break repair involved_inIBAPANTHER:PTN000045567 and UniProtKB:P467361600115GO_REF:0000033GO_CentralGO_REF:0000033
MpndRatproteolysis involved_inIEAUniProtKB-KW:KW-06451600115GO_REF:0000043UniProtGO_REF:0000043

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MpndRatBRCA1-A complex part_ofIBAPANTHER:PTN000045567 and UniProtKB:P467361600115GO_REF:0000033GO_CentralGO_REF:0000033
MpndRatBRISC complex part_ofIBAPANTHER:PTN000045567 and UniProtKB:P467361600115GO_REF:0000033GO_CentralGO_REF:0000033

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MpndRatmetal ion binding enablesIEAUniProtKB-KW:KW-04791600115GO_REF:0000043UniProtGO_REF:0000043
MpndRatmetallopeptidase activity enablesIBAFB:FBgn0027053 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
MpndRatpolyubiquitin modification-dependent protein binding enablesIBAPANTHER:PTN000045567 and UniProtKB:P467361600115GO_REF:0000033GO_CentralGO_REF:0000033
MpndRatprotein binding enablesISOMPND (Homo sapiens)1624291UniProtKB:G5E9A7 more ...RGDPMID:32814053


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:12477932  



Mpnd
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr89926,714 - 933,620 (+)NCBIGRCr8
mRatBN7.29839,473 - 846,446 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl9840,143 - 846,439 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx91,287,342 - 1,293,596 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.096,633,888 - 6,640,137 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.095,592,377 - 5,598,632 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0911,055,370 - 11,061,611 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl911,055,371 - 11,061,611 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0910,040,659 - 10,047,589 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera97,660,577 - 7,666,824 (-)NCBICelera
Cytogenetic Map9q11NCBI
MPND
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38194,343,562 - 4,360,078 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl194,343,527 - 4,360,086 (+)EnsemblGRCh38hg38GRCh38
GRCh37194,343,559 - 4,360,075 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36194,294,570 - 4,311,075 (+)NCBINCBI36Build 36hg18NCBI36
Celera194,281,776 - 4,298,329 (+)NCBICelera
Cytogenetic Map19p13.3NCBI
HuRef194,105,998 - 4,122,602 (+)NCBIHuRef
CHM1_1194,343,227 - 4,359,729 (+)NCBICHM1_1
T2T-CHM13v2.0194,327,019 - 4,343,527 (+)NCBIT2T-CHM13v2.0
Mpnd
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391756,316,201 - 56,323,790 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1756,312,711 - 56,323,790 (+)EnsemblGRCm39 Ensembl
GRCm381756,009,201 - 56,016,790 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1756,005,711 - 56,016,790 (+)EnsemblGRCm38mm10GRCm38
MGSCv371756,148,624 - 56,156,213 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361755,602,619 - 55,609,955 (+)NCBIMGSCv36mm8
Celera1759,427,863 - 59,435,452 (+)NCBICelera
Cytogenetic Map17DNCBI
cM Map1729.11NCBI
Mpnd
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554954,531,895 - 4,538,030 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554954,531,895 - 4,538,030 (-)NCBIChiLan1.0ChiLan1.0
MPND
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2208,727,140 - 8,757,998 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1197,956,543 - 7,987,160 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0193,362,867 - 3,382,984 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1194,312,351 - 4,329,465 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl194,313,178 - 4,329,382 (+)Ensemblpanpan1.1panPan2
MPND
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12055,311,890 - 55,320,226 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2055,304,529 - 55,320,196 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2055,032,429 - 55,048,360 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02055,963,333 - 55,979,259 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2055,970,987 - 55,979,247 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12055,031,495 - 55,039,433 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02055,504,806 - 55,520,722 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02055,703,487 - 55,719,409 (-)NCBIUU_Cfam_GSD_1.0
Mpnd
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118215,330,707 - 215,338,277 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365882,496,506 - 2,503,959 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365882,491,059 - 2,504,076 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MPND
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl274,445,662 - 74,455,881 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1274,445,660 - 74,455,928 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2274,938,611 - 74,948,868 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MPND
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.164,072,007 - 4,090,524 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660814,112,744 - 4,132,173 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mpnd
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248285,328,783 - 5,337,946 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248285,330,536 - 5,337,973 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

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Variants in Mpnd
22 total Variants

Predicted Target Of
Summary Value
Count of predictions:53
Count of miRNA genes:53
Interacting mature miRNAs:53
Transcripts:ENSRNOT00000074075
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
631533Iresp3Immunoglobin response QTL316.2blood immunoglobulin E amount (VT:0002492)serum immunoglobulin E level (CMO:0002101)916094576Rat
10054141Gmadr4Adrenal mass QTL 42.450.0074adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)9121707400Rat
9589158Gluco65Glucose level QTL 656.820.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)949664545496645Rat
7411592Foco8Food consumption QTL 87.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)949664545496645Rat
7207814Bmd91Bone mineral density QTL 913.5femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)9131250552Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)949664545496645Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9141763315Rat

RH137013  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.29846,570 - 846,720 (-)MAPPERmRatBN7.2
Rnor_6.0911,055,096 - 11,055,245NCBIRnor6.0
Rnor_5.0910,040,385 - 10,040,534UniSTSRnor5.0
Celera97,660,303 - 7,660,452UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31


1 to 19 of 19 rows
RefSeq Transcripts NM_001085406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039084206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039084207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039084208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063267727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063267728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063267729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063267730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005488964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005488965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005488966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010054630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010054631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC101893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC158552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB768016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ226713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 19 of 19 rows

Ensembl Acc Id: ENSRNOT00000074075   ⟹   ENSRNOP00000064107
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl9840,143 - 846,439 (+)Ensembl
Rnor_6.0 Ensembl911,055,371 - 11,061,611 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000097565   ⟹   ENSRNOP00000084060
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl9840,143 - 846,439 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000118936   ⟹   ENSRNOP00000086608
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl9840,143 - 846,439 (+)Ensembl
RefSeq Acc Id: NM_001085406   ⟹   NP_001078875
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89927,374 - 933,620 (+)NCBI
mRatBN7.29840,198 - 846,446 (+)NCBI
Rnor_6.0911,055,370 - 11,061,611 (-)NCBI
Rnor_5.0910,040,659 - 10,047,589 (-)NCBI
Celera97,660,577 - 7,666,824 (-)RGD
Sequence:
RefSeq Acc Id: XM_039084206   ⟹   XP_038940134
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89927,319 - 932,963 (+)NCBI
mRatBN7.29839,474 - 845,785 (+)NCBI
RefSeq Acc Id: XM_039084207   ⟹   XP_038940135
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89927,319 - 932,960 (+)NCBI
mRatBN7.29839,476 - 845,782 (+)NCBI
RefSeq Acc Id: XM_039084208   ⟹   XP_038940136
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89927,319 - 932,015 (+)NCBI
mRatBN7.29839,473 - 844,597 (+)NCBI
RefSeq Acc Id: XM_063267727   ⟹   XP_063123797
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89926,714 - 933,617 (+)NCBI
RefSeq Acc Id: XM_063267728   ⟹   XP_063123798
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89926,731 - 933,617 (+)NCBI
RefSeq Acc Id: XM_063267729   ⟹   XP_063123799
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89928,746 - 933,617 (+)NCBI
RefSeq Acc Id: XM_063267730   ⟹   XP_063123800
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89927,319 - 932,015 (+)NCBI
RefSeq Acc Id: XR_005488964
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89927,319 - 932,940 (+)NCBI
mRatBN7.29839,475 - 846,443 (+)NCBI
RefSeq Acc Id: XR_005488965
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89927,319 - 932,854 (+)NCBI
mRatBN7.29839,475 - 845,678 (+)NCBI
RefSeq Acc Id: XR_005488966
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89927,319 - 932,914 (+)NCBI
mRatBN7.29839,474 - 845,752 (+)NCBI
RefSeq Acc Id: XR_010054630
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89927,319 - 931,983 (+)NCBI
RefSeq Acc Id: XR_010054631
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89927,319 - 932,049 (+)NCBI
1 to 5 of 11 rows
1 to 5 of 11 rows
RefSeq Acc Id: NP_001078875   ⟸   NM_001085406
- UniProtKB: B0BMT2 (UniProtKB/TrEMBL),   M0R430 (UniProtKB/TrEMBL),   A0A8I5ZX75 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000064107   ⟸   ENSRNOT00000074075
RefSeq Acc Id: XP_038940136   ⟸   XM_039084208
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038940134   ⟸   XM_039084206
- Peptide Label: isoform X3
- UniProtKB: A0A8I5ZX75 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038940135   ⟸   XM_039084207
- Peptide Label: isoform X4
- UniProtKB: A0A8I5ZX75 (UniProtKB/TrEMBL)
MPN

Name Modeler Protein Id AA Range Protein Structure
AF-B0BMT2-F1-model_v2 AlphaFold B0BMT2 1-487 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13696473
Promoter ID:EPDNEW_R6998
Type:multiple initiation site
Name:Mpnd_1
Description:MPN domain containing
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0911,061,623 - 11,061,683EPDNEW


1 to 32 of 32 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-28568 BioCyc
Ensembl Genes ENSRNOG00000048282 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000074075.3 UniProtKB/TrEMBL
  ENSRNOT00000097565.1 UniProtKB/TrEMBL
  ENSRNOT00000118936.1 UniProtKB/TrEMBL
Gene3D-CATH Cytidine Deaminase, domain 2 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7930963 IMAGE-MGC_LOAD
  IMAGE:9098910 IMAGE-MGC_LOAD
InterPro JAB1_Mov34_MPN_PAD1 UniProtKB/TrEMBL
  JAB_dom_prok UniProtKB/TrEMBL
  JAMM_MPN+_peptidase_M67A UniProtKB/TrEMBL
  MPN UniProtKB/TrEMBL
  RAMA UniProtKB/TrEMBL
KEGG Report rno:681944 UniProtKB/TrEMBL
MGC_CLONE MGC:124795 IMAGE-MGC_LOAD
  MGC:187214 IMAGE-MGC_LOAD
NCBI Gene 681944 ENTREZGENE
PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED UniProtKB/TrEMBL
Pfam JAB UniProtKB/TrEMBL
  Prok-JAB UniProtKB/TrEMBL
  RAMA UniProtKB/TrEMBL
PhenoGen Mpnd PhenoGen
PROSITE MPN UniProtKB/TrEMBL
RatGTEx ENSRNOG00000048282 RatGTEx
Superfamily-SCOP JAB1/MPN domain UniProtKB/TrEMBL
UniProt A0A8I5ZX75 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GF50_RAT UniProtKB/TrEMBL
  A0A8J8XFB8 ENTREZGENE, UniProtKB/TrEMBL
  B0BMT2 ENTREZGENE, UniProtKB/TrEMBL
  M0R430 ENTREZGENE
  Q3MIE1_RAT UniProtKB/TrEMBL
UniProt Secondary M0R430 UniProtKB/TrEMBL
1 to 32 of 32 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-09-05 Mpnd  MPN domain containing  LOC681944  similar to CG4751-PA  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-19 LOC681944  similar to CG4751-PA      Symbol and Name status set to provisional 70820 PROVISIONAL