Symbol:
Otud1
Name:
OTU deubiquitinase 1
RGD ID:
1563344
Description:
Predicted to enable cysteine-type deubiquitinase activity. Predicted to be involved in protein K63-linked deubiquitination. Orthologous to human OTUD1 (OTU deubiquitinase 1); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
LOC498803; OTU domain containing 1; OTU domain-containing protein 1; RGD1563344; similar to OTU domain containing 1
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
OTUD1 (OTU deubiquitinase 1) HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):
Otud1 (OTU domain containing 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Otud1 (OTU deubiquitinase 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
OTUD1 (OTU deubiquitinase 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
OTUD1 (OTU deubiquitinase 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Otud1 (OTU deubiquitinase 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
OTUD1 (OTU deubiquitinase 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
OTUD1 (OTU deubiquitinase 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Otud1 (OTU deubiquitinase 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Homo sapiens (human):
OTUD1 (OTU deubiquitinase 1)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Otud1 (OTU domain containing 1)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Caenorhabditis elegans (roundworm):
duo-3
Alliance
DIOPT (OrthoInspector|PANTHER)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 17 87,168,248 - 87,171,098 (+) NCBI GRCr8 mRatBN7.2 17 82,259,920 - 82,262,770 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 17 82,259,840 - 82,262,995 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 17 85,724,940 - 85,727,790 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 17 89,560,362 - 89,563,213 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 17 83,577,116 - 83,579,967 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 17 86,406,643 - 86,410,670 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 17 86,408,151 - 86,409,518 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 17 88,116,903 - 88,120,492 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 17 93,707,499 - 93,710,025 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 17 81,524,969 - 81,534,067 (+) NCBI Celera Cytogenetic Map 17 q12.3 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Otud1 Rat (+)-catechin multiple interactions ISO OTUD1 (Homo sapiens) 6480464 [Catechin co-treated with Grape Seed Proanthocyanidins] results in increased expression of OTUD1 mRNA CTD PMID:24763279 Otud1 Rat (+)-schisandrin B multiple interactions EXP 6480464 schizandrin B inhibits the reaction [Carbon Tetrachloride results in increased expression of OTUD1 mRNA] CTD PMID:31150632 Otud1 Rat 1,2-dichloroethane decreases expression ISO Otud1 (Mus musculus) 6480464 ethylene dichloride results in decreased expression of OTUD1 mRNA CTD PMID:28960355 Otud1 Rat 1-chloro-2,4-dinitrobenzene increases expression ISO OTUD1 (Homo sapiens) 6480464 Dinitrochlorobenzene results in increased expression of OTUD1 mRNA CTD PMID:17374397 Otud1 Rat 17beta-estradiol multiple interactions EXP 6480464 [bisphenol A co-treated with Estradiol] results in increased expression of OTUD1 mRNA CTD PMID:26496021 Otud1 Rat 17beta-estradiol decreases expression EXP 6480464 Estradiol results in decreased expression of OTUD1 mRNA CTD PMID:32145629 Otud1 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO Otud1 (Mus musculus) 6480464 Tetrachlorodibenzodioxin results in decreased expression of OTUD1 mRNA CTD PMID:19770486 Otud1 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of OTUD1 mRNA CTD PMID:21215274 Otud1 Rat 2,3,7,8-Tetrachlorodibenzofuran decreases expression EXP 6480464 2 more ... CTD PMID:32109520 Otud1 Rat 2-hydroxypropanoic acid increases expression ISO OTUD1 (Homo sapiens) 6480464 Lactic Acid results in increased expression of OTUD1 mRNA CTD PMID:30851411 Otud1 Rat 4,4'-sulfonyldiphenol decreases expression ISO Otud1 (Mus musculus) 6480464 bisphenol S results in decreased expression of OTUD1 mRNA CTD PMID:39298647 Otud1 Rat 4,4'-sulfonyldiphenol increases expression ISO Otud1 (Mus musculus) 6480464 bisphenol S results in increased expression of OTUD1 mRNA CTD PMID:37611474 Otud1 Rat 4-(ethoxymethylene)-2-phenyloxazol-5-one increases expression ISO OTUD1 (Homo sapiens) 6480464 Oxazolone results in increased expression of OTUD1 mRNA CTD PMID:17374397 Otud1 Rat 6-propyl-2-thiouracil increases expression EXP 6480464 Propylthiouracil results in increased expression of OTUD1 mRNA CTD PMID:24780913 Otud1 Rat acrylamide decreases expression EXP 6480464 Acrylamide results in decreased expression of OTUD1 mRNA CTD PMID:28959563 Otud1 Rat acrylamide increases expression ISO OTUD1 (Homo sapiens) 6480464 Acrylamide results in increased expression of OTUD1 mRNA CTD PMID:32763439 Otud1 Rat actinomycin D multiple interactions ISO OTUD1 (Homo sapiens) 6480464 [Dactinomycin co-treated with nutlin 3] results in increased expression of OTUD1 mRNA CTD PMID:38460933 Otud1 Rat all-trans-retinoic acid decreases expression EXP 6480464 Tretinoin results in decreased expression of OTUD1 mRNA CTD PMID:20488242 Otud1 Rat all-trans-retinoic acid increases expression ISO OTUD1 (Homo sapiens) 6480464 Tretinoin results in increased expression of OTUD1 mRNA CTD PMID:23724009 Otud1 Rat avobenzone increases expression ISO OTUD1 (Homo sapiens) 6480464 avobenzone results in increased expression of OTUD1 mRNA CTD PMID:31016361 Otud1 Rat benzene-1,2,4-triol increases expression ISO OTUD1 (Homo sapiens) 6480464 hydroxyhydroquinone results in increased expression of OTUD1 mRNA CTD PMID:39245080 Otud1 Rat benzo[a]pyrene increases expression ISO OTUD1 (Homo sapiens) 6480464 Benzo(a)pyrene results in increased expression of OTUD1 mRNA CTD PMID:20064835 Otud1 Rat benzo[a]pyrene decreases methylation ISO OTUD1 (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased methylation of OTUD1 exon CTD PMID:27901495 Otud1 Rat benzo[a]pyrene decreases expression ISO Otud1 (Mus musculus) 6480464 Benzo(a)pyrene results in decreased expression of OTUD1 mRNA CTD PMID:19770486 Otud1 Rat bis(2-ethylhexyl) phthalate decreases expression ISO Otud1 (Mus musculus) 6480464 Diethylhexyl Phthalate results in decreased expression of OTUD1 mRNA CTD PMID:34319233 Otud1 Rat bisphenol A multiple interactions EXP 6480464 [bisphenol A co-treated with Estradiol] results in increased expression of OTUD1 mRNA CTD PMID:26496021 Otud1 Rat bisphenol A increases expression ISO Otud1 (Mus musculus) 6480464 bisphenol A results in increased expression of OTUD1 mRNA CTD PMID:32156529 Otud1 Rat bisphenol A increases expression ISO OTUD1 (Homo sapiens) 6480464 bisphenol A results in increased expression of OTUD1 mRNA CTD PMID:33670352 Otud1 Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of OTUD1 mRNA CTD PMID:25181051 and PMID:32145629 Otud1 Rat bisphenol F increases expression ISO Otud1 (Mus musculus) 6480464 bisphenol F results in increased expression of OTUD1 mRNA CTD PMID:38685157 Otud1 Rat cadmium dichloride decreases expression ISO OTUD1 (Homo sapiens) 6480464 Cadmium Chloride results in decreased expression of OTUD1 mRNA CTD PMID:38568856 Otud1 Rat cantharidin decreases expression ISO Otud1 (Mus musculus) 6480464 Cantharidin results in decreased expression of OTUD1 mRNA CTD PMID:36907384 Otud1 Rat carbon nanotube decreases expression ISO Otud1 (Mus musculus) 6480464 Nanotubes more ... CTD PMID:25554681 Otud1 Rat copper atom multiple interactions ISO OTUD1 (Homo sapiens) 6480464 [NSC 689534 binds to Copper] which results in increased expression of OTUD1 mRNA CTD PMID:20971185 Otud1 Rat copper(0) multiple interactions ISO OTUD1 (Homo sapiens) 6480464 [NSC 689534 binds to Copper] which results in increased expression of OTUD1 mRNA CTD PMID:20971185 Otud1 Rat coumestrol decreases expression ISO OTUD1 (Homo sapiens) 6480464 Coumestrol results in decreased expression of OTUD1 mRNA CTD PMID:19167446 Otud1 Rat coumestrol multiple interactions ISO OTUD1 (Homo sapiens) 6480464 [Coumestrol co-treated with 2 and 3-bis(3'-hydroxybenzyl)butyrolactone] results in decreased expression of OTUD1 mRNA CTD PMID:19167446 Otud1 Rat cyclosporin A increases expression ISO OTUD1 (Homo sapiens) 6480464 Cyclosporine results in increased expression of OTUD1 mRNA CTD PMID:20106945 and PMID:25562108 Otud1 Rat DDE decreases expression ISO OTUD1 (Homo sapiens) 6480464 Dichlorodiphenyl Dichloroethylene results in decreased expression of OTUD1 mRNA CTD PMID:38568856 Otud1 Rat dibutyl phthalate increases expression ISO Otud1 (Mus musculus) 6480464 Dibutyl Phthalate results in increased expression of OTUD1 mRNA CTD PMID:21266533 Otud1 Rat dorsomorphin multiple interactions ISO OTUD1 (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of OTUD1 mRNA CTD PMID:27188386 Otud1 Rat doxorubicin increases expression ISO Otud1 (Mus musculus) 6480464 Doxorubicin results in increased expression of OTUD1 mRNA CTD PMID:36227756 Otud1 Rat Enterolactone multiple interactions ISO OTUD1 (Homo sapiens) 6480464 [Coumestrol co-treated with 2 and 3-bis(3'-hydroxybenzyl)butyrolactone] results in decreased expression of OTUD1 mRNA CTD PMID:19167446 Otud1 Rat ethanol decreases expression ISO OTUD1 (Homo sapiens) 6480464 Ethanol results in decreased expression of OTUD1 mRNA CTD PMID:31059573 Otud1 Rat ethyl methanesulfonate increases expression ISO OTUD1 (Homo sapiens) 6480464 Ethyl Methanesulfonate results in increased expression of OTUD1 mRNA CTD PMID:23649840 Otud1 Rat formaldehyde increases expression ISO OTUD1 (Homo sapiens) 6480464 Formaldehyde results in increased expression of OTUD1 mRNA CTD PMID:23649840 Otud1 Rat gentamycin decreases expression EXP 6480464 Gentamicins results in decreased expression of OTUD1 mRNA CTD PMID:22061828 Otud1 Rat gentamycin increases expression EXP 6480464 Gentamicins results in increased expression of OTUD1 mRNA CTD PMID:33387578 Otud1 Rat indole-3-methanol multiple interactions EXP 6480464 [indole-3-carbinol co-treated with Diethylnitrosamine] results in increased expression of OTUD1 mRNA CTD PMID:22129741 Otud1 Rat iron dichloride increases expression ISO OTUD1 (Homo sapiens) 6480464 ferrous chloride results in increased expression of OTUD1 mRNA CTD PMID:35984750 Otud1 Rat lipopolysaccharide multiple interactions ISO OTUD1 (Homo sapiens) 6480464 S-(1 and 2-dichlorovinyl)cysteine inhibits the reaction [Lipopolysaccharides results in increased expression of OTUD1 mRNA] CTD PMID:35811015 Otud1 Rat lipopolysaccharide increases expression ISO OTUD1 (Homo sapiens) 6480464 Lipopolysaccharides results in increased expression of OTUD1 mRNA CTD PMID:35811015 Otud1 Rat metformin decreases expression EXP 6480464 Metformin results in decreased expression of OTUD1 mRNA CTD PMID:31324951 Otud1 Rat methotrexate decreases expression ISO OTUD1 (Homo sapiens) 6480464 Methotrexate results in decreased expression of OTUD1 mRNA CTD PMID:24449571 Otud1 Rat methyl methanesulfonate increases expression ISO OTUD1 (Homo sapiens) 6480464 Methyl Methanesulfonate results in increased expression of OTUD1 mRNA CTD PMID:23649840 Otud1 Rat methylmercury chloride decreases expression ISO OTUD1 (Homo sapiens) 6480464 methylmercuric chloride results in decreased expression of OTUD1 mRNA CTD PMID:28001369 Otud1 Rat methylparaben increases expression ISO OTUD1 (Homo sapiens) 6480464 methylparaben results in increased expression of OTUD1 mRNA CTD PMID:31745603 Otud1 Rat N-nitrosodiethylamine multiple interactions EXP 6480464 [indole-3-carbinol co-treated with Diethylnitrosamine] results in increased expression of OTUD1 mRNA CTD PMID:22129741 Otud1 Rat nickel sulfate increases expression ISO OTUD1 (Homo sapiens) 6480464 nickel sulfate results in increased expression of OTUD1 mRNA CTD PMID:17374397 Otud1 Rat niclosamide increases expression ISO OTUD1 (Homo sapiens) 6480464 Niclosamide results in increased expression of OTUD1 mRNA CTD PMID:36318118 Otud1 Rat nitrates multiple interactions ISO Otud1 (Mus musculus) 6480464 [Particulate Matter results in increased abundance of Nitrates] which results in increased expression of OTUD1 mRNA CTD PMID:35964746 Otud1 Rat Nutlin-3 multiple interactions ISO OTUD1 (Homo sapiens) 6480464 [Dactinomycin co-treated with nutlin 3] results in increased expression of OTUD1 mRNA CTD PMID:38460933 Otud1 Rat ozone multiple interactions ISO OTUD1 (Homo sapiens) 6480464 [Air Pollutants results in increased abundance of Ozone] which affects the expression of OTUD1 mRNA CTD PMID:35430440 Otud1 Rat paracetamol increases expression ISO OTUD1 (Homo sapiens) 6480464 Acetaminophen results in increased expression of OTUD1 mRNA CTD PMID:21420995 and PMID:29067470 Otud1 Rat paracetamol increases expression EXP 6480464 Acetaminophen results in increased expression of OTUD1 mRNA CTD PMID:33387578 Otud1 Rat phenformin decreases expression EXP 6480464 Phenformin results in decreased expression of OTUD1 mRNA CTD PMID:31324951 Otud1 Rat phenobarbital affects expression ISO Otud1 (Mus musculus) 6480464 Phenobarbital affects the expression of OTUD1 mRNA CTD PMID:23091169 Otud1 Rat phenylmercury acetate decreases expression ISO OTUD1 (Homo sapiens) 6480464 Phenylmercuric Acetate results in decreased expression of OTUD1 mRNA CTD PMID:26272509 Otud1 Rat phenylmercury acetate multiple interactions ISO OTUD1 (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of OTUD1 mRNA CTD PMID:27188386 Otud1 Rat pirinixic acid increases expression ISO Otud1 (Mus musculus) 6480464 pirinixic acid results in increased expression of OTUD1 mRNA CTD PMID:18301758 Otud1 Rat rac-lactic acid increases expression ISO OTUD1 (Homo sapiens) 6480464 Lactic Acid results in increased expression of OTUD1 mRNA CTD PMID:30851411 Otud1 Rat raloxifene multiple interactions ISO Otud1 (Mus musculus) 6480464 [SOD1 protein mutant form affects the susceptibility to Raloxifene Hydrochloride] which results in increased expression of OTUD1 mRNA CTD PMID:33269387 Otud1 Rat rotenone decreases expression EXP 6480464 Rotenone results in decreased expression of OTUD1 mRNA CTD PMID:28374803 Otud1 Rat S-(1,2-dichlorovinyl)-L-cysteine multiple interactions ISO OTUD1 (Homo sapiens) 6480464 S-(1 and 2-dichlorovinyl)cysteine inhibits the reaction [Lipopolysaccharides results in increased expression of OTUD1 mRNA] CTD PMID:35811015 Otud1 Rat SB 431542 multiple interactions ISO OTUD1 (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of OTUD1 mRNA CTD PMID:27188386 Otud1 Rat sodium arsenite increases expression ISO OTUD1 (Homo sapiens) 6480464 sodium arsenite results in increased expression of OTUD1 mRNA CTD PMID:38568856 Otud1 Rat Soman increases expression EXP 6480464 Soman results in increased expression of OTUD1 mRNA CTD PMID:19281266 Otud1 Rat sulindac increases expression ISO OTUD1 (Homo sapiens) 6480464 Sulindac results in increased expression of OTUD1 mRNA CTD PMID:11906190 Otud1 Rat sunitinib decreases expression ISO OTUD1 (Homo sapiens) 6480464 Sunitinib results in decreased expression of OTUD1 mRNA CTD PMID:31533062 Otud1 Rat testosterone decreases expression ISO OTUD1 (Homo sapiens) 6480464 Testosterone results in decreased expression of OTUD1 mRNA CTD PMID:33359661 Otud1 Rat tetrachloromethane increases expression ISO Otud1 (Mus musculus) 6480464 Carbon Tetrachloride results in increased expression of OTUD1 mRNA CTD PMID:27339419 Otud1 Rat tetrachloromethane multiple interactions EXP 6480464 schizandrin B inhibits the reaction [Carbon Tetrachloride results in increased expression of OTUD1 mRNA] CTD PMID:31150632 Otud1 Rat tetrachloromethane increases expression EXP 6480464 Carbon Tetrachloride results in increased expression of OTUD1 mRNA CTD PMID:31150632 Otud1 Rat thioacetamide increases expression EXP 6480464 Thioacetamide results in increased expression of OTUD1 mRNA CTD PMID:34492290 Otud1 Rat thiram increases expression ISO OTUD1 (Homo sapiens) 6480464 Thiram results in increased expression of OTUD1 mRNA CTD PMID:38568856 Otud1 Rat titanium dioxide decreases methylation ISO Otud1 (Mus musculus) 6480464 titanium dioxide results in decreased methylation of OTUD1 gene CTD PMID:35295148 Otud1 Rat trichloroethene increases expression EXP 6480464 Trichloroethylene results in increased expression of OTUD1 mRNA CTD PMID:33387578 Otud1 Rat triclosan increases expression ISO OTUD1 (Homo sapiens) 6480464 Triclosan results in increased expression of OTUD1 mRNA CTD PMID:30510588 Otud1 Rat triphenyl phosphate affects expression ISO OTUD1 (Homo sapiens) 6480464 triphenyl phosphate affects the expression of OTUD1 mRNA CTD PMID:37042841 Otud1 Rat urethane increases expression ISO OTUD1 (Homo sapiens) 6480464 Urethane results in increased expression of OTUD1 mRNA CTD PMID:28818685 Otud1 Rat valproic acid increases expression ISO OTUD1 (Homo sapiens) 6480464 Valproic Acid results in increased expression of OTUD1 mRNA CTD PMID:29154799 Otud1 Rat valproic acid increases methylation ISO OTUD1 (Homo sapiens) 6480464 Valproic Acid results in increased methylation of OTUD1 gene CTD PMID:29154799 Otud1 Rat vinclozolin decreases expression EXP 6480464 vinclozolin results in decreased expression of OTUD1 mRNA CTD PMID:23555832 Otud1 Rat zinc atom multiple interactions ISO OTUD1 (Homo sapiens) 6480464 [PCI 5002 co-treated with Zinc] results in increased expression of OTUD1 mRNA CTD PMID:18593933 Otud1 Rat zinc(0) multiple interactions ISO OTUD1 (Homo sapiens) 6480464 [PCI 5002 co-treated with Zinc] results in increased expression of OTUD1 mRNA CTD PMID:18593933
(+)-catechin (ISO) (+)-schisandrin B (EXP) 1,2-dichloroethane (ISO) 1-chloro-2,4-dinitrobenzene (ISO) 17beta-estradiol (EXP) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2,3,7,8-Tetrachlorodibenzofuran (EXP) 2-hydroxypropanoic acid (ISO) 4,4'-sulfonyldiphenol (ISO) 4-(ethoxymethylene)-2-phenyloxazol-5-one (ISO) 6-propyl-2-thiouracil (EXP) acrylamide (EXP,ISO) actinomycin D (ISO) all-trans-retinoic acid (EXP,ISO) avobenzone (ISO) benzene-1,2,4-triol (ISO) benzo[a]pyrene (ISO) bis(2-ethylhexyl) phthalate (ISO) bisphenol A (EXP,ISO) bisphenol F (ISO) cadmium dichloride (ISO) cantharidin (ISO) carbon nanotube (ISO) copper atom (ISO) copper(0) (ISO) coumestrol (ISO) cyclosporin A (ISO) DDE (ISO) dibutyl phthalate (ISO) dorsomorphin (ISO) doxorubicin (ISO) Enterolactone (ISO) ethanol (ISO) ethyl methanesulfonate (ISO) formaldehyde (ISO) gentamycin (EXP) indole-3-methanol (EXP) iron dichloride (ISO) lipopolysaccharide (ISO) metformin (EXP) methotrexate (ISO) methyl methanesulfonate (ISO) methylmercury chloride (ISO) methylparaben (ISO) N-nitrosodiethylamine (EXP) nickel sulfate (ISO) niclosamide (ISO) nitrates (ISO) Nutlin-3 (ISO) ozone (ISO) paracetamol (EXP,ISO) phenformin (EXP) phenobarbital (ISO) phenylmercury acetate (ISO) pirinixic acid (ISO) rac-lactic acid (ISO) raloxifene (ISO) rotenone (EXP) S-(1,2-dichlorovinyl)-L-cysteine (ISO) SB 431542 (ISO) sodium arsenite (ISO) Soman (EXP) sulindac (ISO) sunitinib (ISO) testosterone (ISO) tetrachloromethane (EXP,ISO) thioacetamide (EXP) thiram (ISO) titanium dioxide (ISO) trichloroethene (EXP) triclosan (ISO) triphenyl phosphate (ISO) urethane (ISO) valproic acid (ISO) vinclozolin (EXP) zinc atom (ISO) zinc(0) (ISO)
Otud1 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 17 87,168,248 - 87,171,098 (+) NCBI GRCr8 mRatBN7.2 17 82,259,920 - 82,262,770 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 17 82,259,840 - 82,262,995 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 17 85,724,940 - 85,727,790 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 17 89,560,362 - 89,563,213 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 17 83,577,116 - 83,579,967 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 17 86,406,643 - 86,410,670 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 17 86,408,151 - 86,409,518 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 17 88,116,903 - 88,120,492 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 17 93,707,499 - 93,710,025 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 17 81,524,969 - 81,534,067 (+) NCBI Celera Cytogenetic Map 17 q12.3 NCBI
OTUD1 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 10 23,439,075 - 23,442,377 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 10 23,439,075 - 23,442,377 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 10 23,728,004 - 23,731,306 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 10 23,767,592 - 23,771,316 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 10 23,416,596 - 23,419,451 (+) NCBI Celera Cytogenetic Map 10 p12.2 NCBI HuRef 10 23,388,912 - 23,392,024 (+) NCBI HuRef CHM1_1 10 23,728,577 - 23,731,689 (+) NCBI CHM1_1 T2T-CHM13v2.0 10 23,459,207 - 23,462,509 (+) NCBI T2T-CHM13v2.0
Otud1 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 2 19,662,542 - 19,666,090 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 2 19,662,563 - 19,665,394 (+) Ensembl GRCm39 Ensembl GRCm38 2 19,657,731 - 19,661,279 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 2 19,657,752 - 19,660,583 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 2 19,579,689 - 19,582,217 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 2 19,573,560 - 19,578,344 (+) NCBI MGSCv36 mm8 Celera 2 19,550,304 - 19,552,833 (+) NCBI Celera Cytogenetic Map 2 A3 NCBI cM Map 2 13.78 NCBI
Otud1 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 NW_004955429 5,588,333 - 5,590,220 (-) NCBI ChiLan1.0 ChiLan1.0
OTUD1 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 8 36,136,514 - 36,139,640 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 10 36,141,860 - 36,144,966 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 10 23,612,632 - 23,614,830 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 10 23,985,437 - 23,988,425 (+) NCBI panpan1.1 PanPan1.1 panPan2
OTUD1 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 2 9,746,652 - 9,768,868 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 2 8,439,201 - 8,529,306 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 2 7,949,157 - 8,039,598 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 2 8,037,867 - 8,039,357 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 2 7,315,556 - 7,405,754 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 2 7,398,871 - 7,489,616 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 2 7,566,596 - 7,656,887 (-) NCBI UU_Cfam_GSD_1.0
Otud1
OTUD1 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 10 51,619,680 - 51,621,116 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 10 51,618,442 - 51,621,309 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 10 57,272,982 - 57,275,557 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
OTUD1 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 9 23,203,950 - 23,206,996 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 9 23,204,327 - 23,205,766 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666051 28,968,679 - 28,971,733 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Otud1
.
Predicted Target Of
Count of predictions: 27 Count of miRNA genes: 26 Interacting mature miRNAs: 27 Transcripts: ENSRNOT00000022734 Prediction methods: Miranda, Rnahybrid Result types: miRGate_prediction
8694181 Bw151 Body weight QTL 151 4.36 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 17 48560935 86533673 Rat 1358295 Aocep1 Aortic cell protein QTL 1 6.1 7e-07 thoracic aorta cellular protein amount (VT:0010598) aortic cell percentage 17 40990005 85990005 Rat 12904736 Cm121 Cardiac mass QTL 121 0.043 heart mass (VT:0007028) heart wet weight to body weight ratio (CMO:0002408) 17 71774621 82479847 Rat 7411575 Bw140 Body weight QTL 140 30.2 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 17 48560935 86533673 Rat 2301412 Kidm40 Kidney mass QTL 40 0.001 kidney mass (VT:0002707) both kidneys wet weight to body weight ratio (CMO:0000340) 17 37479847 82479847 Rat 2317060 Aia26 Adjuvant induced arthritis QTL 26 3.22 joint integrity trait (VT:0010548) right rear ankle joint diameter (CMO:0002150) 17 38281509 83281509 Rat 1354588 Bvd4 Brain ventricular dilatation QTL 4 5.31 0.001 brain ventricle morphology trait (VT:0000822) hydrocephalus severity score (CMO:0001881) 17 53498828 82479847 Rat 7411577 Bw141 Body weight QTL 141 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 17 62619516 86533673 Rat 4889894 Eae33 Experimental allergic encephalomyelitis QTL 33 5.2 0.0001 nervous system integrity trait (VT:0010566) experimental autoimmune encephalomyelitis severity score (CMO:0001419) 17 50909099 86022412 Rat 2317038 Ginf3 Gastrointestinal inflammation QTL 3 2.89 0.005 liver integrity trait (VT:0010547) liver granuloma severity score (CMO:0002157) 17 49920154 86533673 Rat 2317045 Aia11 Adjuvant induced arthritis QTL 11 4.06 joint integrity trait (VT:0010548) left rear ankle joint diameter (CMO:0002149) 17 60781426 86533673 Rat 2317054 Aia12 Adjuvant induced arthritis QTL 12 4.24 joint integrity trait (VT:0010548) left rear ankle joint diameter (CMO:0002149) 17 38281509 83281509 Rat 2303580 Gluco49 Glucose level QTL 49 2 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 17 50040271 86533673 Rat
RH143754
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 17 82,260,910 - 82,261,171 (+) MAPPER mRatBN7.2 Rnor_6.0 17 86,408,811 - 86,409,071 NCBI Rnor6.0 Rnor_5.0 17 88,118,631 - 88,118,891 UniSTS Rnor5.0 RGSC_v3.4 17 93,708,159 - 93,708,419 UniSTS RGSC3.4 Celera 17 81,532,208 - 81,532,468 UniSTS RH 3.4 Map 17 836.5 UniSTS Cytogenetic Map 17 q12.3 UniSTS
BI294581
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 17 82,256,750 - 82,256,903 (+) MAPPER mRatBN7.2 Rnor_6.0 17 86,404,651 - 86,404,803 NCBI Rnor6.0 Rnor_5.0 17 88,114,471 - 88,114,623 UniSTS Rnor5.0 RGSC_v3.4 17 93,703,999 - 93,704,151 UniSTS RGSC3.4 Celera 17 81,528,142 - 81,528,294 UniSTS RH 3.4 Map 17 836.1 UniSTS Cytogenetic Map 17 q12.3 UniSTS
RH135024
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 17 82,262,382 - 82,262,585 (+) MAPPER mRatBN7.2 Rnor_6.0 17 86,410,283 - 86,410,485 NCBI Rnor6.0 Rnor_5.0 17 88,120,103 - 88,120,305 UniSTS Rnor5.0 RGSC_v3.4 17 93,709,631 - 93,709,833 UniSTS RGSC3.4 Celera 17 81,533,680 - 81,533,882 UniSTS RH 3.4 Map 17 836.4 UniSTS Cytogenetic Map 17 q12.3 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
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Ensembl Acc Id:
ENSRNOT00000022734 ⟹ ENSRNOP00000060310
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 17 82,259,840 - 82,262,995 (+) Ensembl Rnor_6.0 Ensembl 17 86,408,151 - 86,409,518 (+) Ensembl
RefSeq Acc Id:
NM_001400772 ⟹ NP_001387701
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 17 87,168,248 - 87,171,098 (+) NCBI mRatBN7.2 17 82,259,920 - 82,262,770 (+) NCBI
Ensembl Acc Id:
ENSRNOP00000060310 ⟸ ENSRNOT00000022734
RefSeq Acc Id:
NP_001387701 ⟸ NM_001400772
- UniProtKB:
D3ZNC0 (UniProtKB/TrEMBL)
RGD ID: 13700611 Promoter ID: EPDNEW_R11132 Type: single initiation site Name: Otud1_1 Description: OTU deubiquitinase 1 SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Experiment Methods: Single-end sequencing. Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 17 86,408,153 - 86,408,213 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2014-03-13
Otud1
OTU deubiquitinase 1
Otud1
OTU domain containing 1
Nomenclature updated to reflect human and mouse nomenclature
1299863 APPROVED
2008-03-07
Otud1
OTU domain containing 1
RGD1563344_predicted
similar to OTU domain containing 1 (predicted)
Nomenclature updated to reflect human and mouse nomenclature
1299863 APPROVED
2006-03-07
RGD1563344_predicted
similar to OTU domain containing 1 (predicted)
LOC498803
similar to OTU domain containing 1
Symbol and Name status set to approved
1299863 APPROVED
2006-02-09
LOC498803
similar to OTU domain containing 1
Symbol and Name status set to provisional
70820 PROVISIONAL
