Symbol:
Mindy4
Name:
MINDY lysine 48 deubiquitinase 4
RGD ID:
1562590
Description:
Predicted to enable K48-linked deubiquitinase activity. Predicted to be involved in protein K48-linked deubiquitination and proteolysis. Orthologous to human MINDY4 (MINDY lysine 48 deubiquitinase 4); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acrylamide.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
Fam188b; family with sequence similarity 188, member B; LOC312365; probable ubiquitin carboxyl-terminal hydrolase MINDY-4; RGD1562590; similar to hypothetical protein
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 4 85,689,049 - 85,797,553 (+) NCBI GRCr8 mRatBN7.2 4 84,358,660 - 84,469,189 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 4 84,358,902 - 84,463,395 (+) Ensembl mRatBN7.2 Ensembl Rnor_6.0 4 85,427,741 - 85,536,264 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 4 85,427,555 - 85,532,238 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 4 150,079,958 - 150,188,230 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 4 83,974,751 - 84,079,264 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 4 79,225,891 - 79,334,406 (+) NCBI Celera Cytogenetic Map 4 q24 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Mindy4 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 4 85,689,049 - 85,797,553 (+) NCBI GRCr8 mRatBN7.2 4 84,358,660 - 84,469,189 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 4 84,358,902 - 84,463,395 (+) Ensembl mRatBN7.2 Ensembl Rnor_6.0 4 85,427,741 - 85,536,264 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 4 85,427,555 - 85,532,238 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 4 150,079,958 - 150,188,230 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 4 83,974,751 - 84,079,264 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 4 79,225,891 - 79,334,406 (+) NCBI Celera Cytogenetic Map 4 q24 NCBI
MINDY4 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 7 30,771,417 - 30,892,387 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 7 30,771,417 - 30,892,387 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 7 30,811,033 - 30,932,002 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 7 30,777,558 - 30,898,527 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 7 30,800,258 - 30,921,208 (+) NCBI Celera Cytogenetic Map 7 p14.3 NCBI HuRef 7 30,693,266 - 30,814,224 (+) NCBI HuRef CHM1_1 7 30,811,313 - 30,931,937 (+) NCBI CHM1_1 T2T-CHM13v2.0 7 30,909,066 - 31,030,035 (+) NCBI T2T-CHM13v2.0 CRA_TCAGchr7v2 7 30,860,569 - 30,981,508 (+) NCBI
Mindy4 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 6 55,180,337 - 55,297,208 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 6 55,180,368 - 55,297,207 (+) Ensembl GRCm39 Ensembl GRCm38 6 55,203,350 - 55,320,223 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 6 55,203,383 - 55,320,222 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 6 55,153,377 - 55,270,216 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 6 55,132,961 - 55,208,203 (+) NCBI MGSCv36 mm8 Celera 6 55,739,391 - 55,854,058 (+) NCBI Celera Cytogenetic Map 6 B3 NCBI cM Map 6 27.38 NCBI
Mindy4 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955410 31,943,915 - 32,046,747 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955410 31,944,140 - 32,047,112 (+) NCBI ChiLan1.0 ChiLan1.0
MINDY4 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 6 35,582,264 - 35,703,509 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 7 83,907,207 - 84,028,237 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 7 31,384,527 - 31,505,551 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 7 31,504,351 - 31,625,097 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 7 31,504,351 - 31,625,097 (+) Ensembl panpan1.1 panPan2
MINDY4 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 14 43,469,740 - 43,573,999 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 14 43,469,784 - 43,573,999 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 14 42,902,094 - 43,006,260 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 14 43,410,405 - 43,514,614 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 14 43,410,440 - 43,514,478 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 14 43,526,190 - 43,630,289 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 14 43,202,334 - 43,306,793 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 14 43,563,818 - 43,668,049 (+) NCBI UU_Cfam_GSD_1.0
Mindy4 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405118 87,801,612 - 87,915,001 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936478 7,013,274 - 7,126,749 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936478 7,013,419 - 7,126,734 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
MINDY4 (Sus scrofa - pig)
MINDY4 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 21 27,473,251 - 27,621,772 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 21 27,489,814 - 27,621,647 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666042 77,082,635 - 77,214,575 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Mindy4 (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 352 Count of miRNA genes: 217 Interacting mature miRNAs: 253 Transcripts: ENSRNOT00000015469, ENSRNOT00000064923, ENSRNOT00000065400, ENSRNOT00000074425 Prediction methods: Microtar, Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
1358352 Srcrt3 Stress Responsive Cort QTL 3 2.29 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 4 38465774 146803430 Rat 1549843 Bw53 Body weight QTL 53 0.0001 body mass (VT:0001259) body weight gain (CMO:0000420) 4 61697658 103194791 Rat 61445 Strs3 Sensitivity to stroke QTL 3 3 cerebrum integrity trait (VT:0010549) post-insult time to onset of cerebrovascular lesion (CMO:0002343) 4 40433388 85433388 Rat 6893678 Bw108 Body weight QTL 108 2.6 0.006 body mass (VT:0001259) body weight (CMO:0000012) 4 43457976 88457976 Rat 10755501 Bp390 Blood pressure QTL 390 2.5 arterial blood pressure trait (VT:2000000) diastolic blood pressure (CMO:0000005) 4 26775591 168368347 Rat 1357342 Bw40 Body weight QTL 40 0.001 body mass (VT:0001259) body weight (CMO:0000012) 4 76647384 117676292 Rat 631556 Bp135 Blood pressure QTL 135 0.017 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 4 78881294 117676292 Rat 1358363 Sradr3 Stress Responsive Adrenal Weight QTL 3 6.19 adrenal gland mass (VT:0010420) both adrenal glands wet weight (CMO:0000164) 4 57486946 102486946 Rat 61330 Eau1 Experimental allergic uveoretinitis QTL 1 0.0003 uvea integrity trait (VT:0010551) experimental autoimmune uveitis score (CMO:0001504) 4 70362013 132642728 Rat 70167 Bw22 Body weight QTL 22 3.1 body mass (VT:0001259) body weight (CMO:0000012) 4 76647384 117676292 Rat 1549839 Bw52 Body weight QTL 52 0.0001 body mass (VT:0001259) body weight gain (CMO:0000420) 4 61697658 115089733 Rat 70177 Xhs1 X-ray hypersensitivity QTL 1 25.1 intestine integrity trait (VT:0010554) post-insult time to onset of moribundity (CMO:0001896) 4 82798864 152731274 Rat 724522 Bp146 Blood pressure QTL 146 2.2 0.0021 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 4 73630210 118630210 Rat 8694439 Bw168 Body weight QTL 168 9.57 0.001 retroperitoneal fat pad mass (VT:0010430) retroperitoneal fat pad weight to body weight ratio (CMO:0000635) 4 40433414 85433414 Rat 1641919 Alc22 Alcohol consumption QTL 22 0.0005 drinking behavior trait (VT:0001422) ethanol drink intake rate (CMO:0001407) 4 81192555 126192555 Rat 2300179 Bmd50 Bone mineral density QTL 50 5.9 0.0001 femur mineral mass (VT:0010011) volumetric bone mineral density (CMO:0001553) 4 60928534 105928534 Rat 1354660 Salc1 Saline consumption QTL 1 11.26 drinking behavior trait (VT:0001422) saline drink intake rate (CMO:0001627) 4 44463908 148090542 Rat 70192 BpQTLcluster5 Blood pressure QTL cluster 5 4.183 arterial blood pressure trait (VT:2000000) absolute change in mean arterial blood pressure (CMO:0000533) 4 62933508 114921294 Rat 1298082 Stresp4 Stress response QTL 4 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 4 50119848 146803430 Rat 61364 Iddm2 Insulin dependent diabetes mellitus QTL 2 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 4 78885890 102684881 Rat 1300139 Hrtrt6 Heart rate QTL 6 2.85 heart pumping trait (VT:2000009) heart rate (CMO:0000002) 4 39524264 116179656 Rat 70200 Alc18 Alcohol consumption QTL 18 9.2 drinking behavior trait (VT:0001422) ethanol intake volume to total fluid intake volume ratio (CMO:0001591) 4 56647873 149491524 Rat 1578657 Bss12 Bone structure and strength QTL 12 8.9 femur morphology trait (VT:0000559) femoral neck cross-sectional area (CMO:0001697) 4 60220938 105220938 Rat 1578658 Bss13 Bone structure and strength QTL 13 8 femur strength trait (VT:0010010) femoral neck polar moment of inertia (CMO:0001670) 4 60220938 105220938 Rat 2316958 Gluco58 Glucose level QTL 58 10 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 4 11320076 180699135 Rat 6478684 Anxrr30 Anxiety related response QTL 30 0.00087 defecation behavior trait (VT:0010462) defecation rate (CMO:0000998) 4 62753847 107753847 Rat 2302051 Pia28 Pristane induced arthritis QTL 28 5.3 0.001 blood autoantibody amount (VT:0003725) serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112) 4 73630210 118630210 Rat 2306794 Ean2 Experimental allergic neuritis QTL 2 6.4 nervous system integrity trait (VT:0010566) IFNG-secreting splenocyte count (CMO:0002122) 4 83428419 95853334 Rat 738009 Sach4 Saccharine consumption QTL 4 4.9 0.000016 consumption behavior trait (VT:0002069) saccharin intake volume to total fluid intake volume ratio (CMO:0001601) 4 59948935 154902892 Rat 631261 Tcas3 Tongue tumor susceptibility QTL 3 6.88 tongue integrity trait (VT:0010553) number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950) 4 10814170 91360527 Rat 738015 Pia9 Pristane induced arthritis QTL 9 4.5 0.048 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 4 80694870 125694870 Rat 2312567 Glom19 Glomerulus QTL 19 1.9 0.006 kidney glomerulus morphology trait (VT:0005325) index of glomerular damage (CMO:0001135) 4 45456990 146803430 Rat 6478772 Anxrr49 Anxiety related response QTL 49 0.15488 defecation behavior trait (VT:0010462) defecation rate (CMO:0000998) 4 62753847 107753847 Rat 631646 Stl4 Serum triglyceride level QTL 4 6.5 0.0001 blood triglyceride amount (VT:0002644) plasma triglyceride level (CMO:0000548) 4 73169846 132642728 Rat 2312569 Pur19 Proteinuria QTL 19 3.4 0.001 urine total protein amount (VT:0000032) urine total protein excretion rate (CMO:0000756) 4 65882107 96130297 Rat 8655961 Kidm43 Kidney mass QTL 43 18 kidney mass (VT:0002707) both kidneys wet weight (CMO:0000085) 4 36303261 103194984 Rat 1354612 Foco1 Food consumption QTL 1 8.87 eating behavior trait (VT:0001431) food intake rate (CMO:0000427) 4 44463908 148090542 Rat 634344 Hcar7 Hepatocarcinoma resistance QTL 7 7.8 liver integrity trait (VT:0010547) liver tumorous lesion number (CMO:0001068) 4 70808386 115808386 Rat 2303168 Bp330 Blood pressure QTL 330 4.25 0.017 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 4 5214602 146446691 Rat 738031 Alc14 Alcohol consumption QTL 14 7.6 0.00003 consumption behavior trait (VT:0002069) ethanol drink intake rate to body weight ratio (CMO:0001616) 4 59948935 154902892 Rat 1576316 Ept5 Estrogen-induced pituitary tumorigenesis QTL 5 3.8 pituitary gland mass (VT:0010496) pituitary gland wet weight (CMO:0000853) 4 83428419 177635233 Rat 631662 Hcar2 Hepatocarcinoma resistance QTL 2 3.1 0.0003 liver integrity trait (VT:0010547) volume of individual liver tumorous lesion (CMO:0001078) 4 78878504 123878504 Rat 1576305 Emca6 Estrogen-induced mammary cancer QTL 6 5.8 mammary gland integrity trait (VT:0010552) mammary tumor number (CMO:0000343) 4 44463720 155883716 Rat 631651 Bp124 Blood pressure QTL 124 3 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 4 62879517 107879517 Rat 61418 Pia5 Pristane induced arthritis QTL 5 4.5 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 4 62277855 128289560 Rat 738016 Alc16 Alcohol consumption QTL 16 3.6 0.00015 consumption behavior trait (VT:0002069) ethanol drink intake rate to body weight ratio (CMO:0001616) 4 59948935 154902892 Rat 1558651 Swd3 Spike wave discharge measurement QTL 3 4.62 0.000024 brain electrophysiology trait (VT:0010557) brain spike-and-wave discharge frequency (CMO:0001742) 4 58432133 92991462 Rat 1641833 Alc21 Alcohol consumption QTL 21 8.6 0.0001 drinking behavior trait (VT:0001422) ethanol drink intake rate (CMO:0001407) 4 56698790 126192555 Rat 2306899 Bp338 Blood pressure QTL 338 0.071 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 4 81006124 120102625 Rat 631674 Iddm14 Insulin dependent diabetes mellitus QTL 14 blood glucose amount (VT:0000188) plasma glucose level (CMO:0000042) 4 64528739 157573521 Rat 631546 Bp86 Blood pressure QTL 86 3.2 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 4 57114432 91360801 Rat 6478743 Anxrr40 Anxiety related response QTL 40 0.83076 defecation behavior trait (VT:0010462) defecation rate (CMO:0000998) 4 62753847 107753847 Rat 7394826 Bw126 Body weight QTL 126 0.002 body mass (VT:0001259) body weight gain (CMO:0000420) 4 62933269 87483707 Rat 12798520 Anxrr55 Anxiety related response QTL 55 4.45 0.01 locomotor behavior trait (VT:0001392) number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715) 4 32583980 114627242 Rat
RH135394
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 4 84,457,372 - 84,458,689 (+) MAPPER mRatBN7.2 mRatBN7.2 4 84,458,475 - 84,458,689 (+) MAPPER mRatBN7.2 Rnor_6.0 4 85,527,460 - 85,527,673 NCBI Rnor6.0 Rnor_6.0 4 85,526,336 - 85,527,673 NCBI Rnor6.0 Rnor_5.0 4 150,179,426 - 150,179,639 UniSTS Rnor5.0 Rnor_5.0 4 150,178,512 - 150,179,639 UniSTS Rnor5.0 RGSC_v3.4 4 84,073,187 - 84,074,524 UniSTS RGSC3.4 RGSC_v3.4 4 84,074,311 - 84,074,524 UniSTS RGSC3.4 Celera 4 79,325,602 - 79,325,815 UniSTS Celera 4 79,324,492 - 79,325,815 UniSTS RH 3.4 Map 4 527.8 UniSTS Cytogenetic Map 4 q24 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000015469 ⟹ ENSRNOP00000015469
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 4 84,358,902 - 84,463,395 (+) Ensembl Rnor_6.0 Ensembl 4 85,427,555 - 85,532,238 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000109254 ⟹ ENSRNOP00000082940
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 4 84,358,902 - 84,425,237 (+) Ensembl
RefSeq Acc Id:
XM_039108680 ⟹ XP_038964608
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 4 85,689,050 - 85,797,553 (+) NCBI mRatBN7.2 4 84,358,787 - 84,469,189 (+) NCBI
RefSeq Acc Id:
XM_039108681 ⟹ XP_038964609
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 4 85,726,358 - 85,797,553 (+) NCBI mRatBN7.2 4 84,397,041 - 84,469,189 (+) NCBI
RefSeq Acc Id:
XM_063286962 ⟹ XP_063143032
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 4 85,689,050 - 85,724,198 (+) NCBI
RefSeq Acc Id:
XM_231787 ⟹ XP_231787
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 4 85,689,049 - 85,797,553 (+) NCBI mRatBN7.2 4 84,358,792 - 84,469,189 (+) NCBI Rnor_6.0 4 85,427,741 - 85,536,264 (+) NCBI Rnor_5.0 4 150,079,958 - 150,188,230 (+) NCBI RGSC_v3.4 4 83,974,751 - 84,079,264 (+) RGD
Sequence:
TTCTCTCCCTCCCCCCCTAGATCGCTGGTTTCCCAGGAAGGGGAGGAGTTCTTCCTGGCGCGGATGCCACCGTCGCTAGGGCAACGCCGCTTTACTGGGCCCAACGGATTACGCGGCCTGGGGGTGCA GGCAGCCGCGTGGCCTCGTGGGCAGCGCTAGCAGCATGGACAGTCTGTACGTGGAGGAGGTGGCCGCCTCCCTGGTCAGGGAGTTTCTTAGCAGAAAGGGTTTGAACAAGACGTTCATGACCATGGAT CAGGAGCGCCCCCGCTGTGAGCTGAGCATCAACAGCAGGAATGACCTCCGCAGAGTTCTACATCTGGAGTTTCTCTACAAGGAGAACAAGACAAAAGAAAAGCCTCTGAAAACAAACCTGGAACTCAT TACCAGATACTTTCTGGATCATTTTGGAAATACAGACAGCACTGAAAGTCAGGAAGCCCCGATCCCTGCAATCCCTATTCCAAAGAAAAACAGCAAATTGCCTTTGCGATACCCAGAGGCCACACTGG TGAATATATATGACCTTTCAGATGAAGACACAGGAAGACGGACATCATGGTCAGAGACAGGCAAAGCCAGGCATGACAATCTGGATGGGGACATATTTGGTAATTTCATGTCTTCAAAAAAAAACCCA TACAAAAGTAAGCCTGCGCACATGGTCCTGGGTGACAGCCTCCCTTTGGTTCCTGCGTGGGAGAAGGTGGACCAGCTTCACTCATCAGAGCCTGGCATAGATATGAAGAGGACAGTGGAGAGGACCAG GCCGAAGTCTGGCCTGATTGTCCGAGGCATGATGGCTGGGCCTGTCGCCAGCTCCTCGCAGGACTCTTTCCGCAAACGCTCTCTGCGACGGTCCTCGACTTTGAGCAGGAAGCTCCAAGCCCCAGAGG AGAGCCAGCAGCAGTCCGAGCCATTTGTTCACACCCCAGTCTGTCCAGGACCACAGGAGGTCTCTGCTTCTAGCAGTGACTCCTTCTCCAGGAGTCCTCTGGGTCAGCTGAATGAACTGTCTATAGAG AAGCCAAATGCTACTCCTAGCAGCCAAGGGCCGTGCCAGAGGGACAGGCCCAGGCTAAGAAGTATTTCAGAGGACAGCCCACTGGGGTACAGCCACACAGAAATCATCACGACACCTTTGAGGCTGGA CTTGCCTGACGGGAATTCCAGGATGCCCCAGGAACGGCTAGAAAGAGCATTCAAGCGGCAAGGCGGCCAGCCCCCGTCTCTCAGGAAAAGTCAGTTGGTGTCTGACAGGACGGGTGATAAGCCAGACG CCCTGCAGCTGGAGGATGTTGAAGATGAACTGATAAAGGAAGACATTGTCCTGTTCCCACCTCCGTCAATGCTCAAGCTTCTAACTGTGTCCAAGCCAATTGACCTCTCTCTGGCTAAGGAGATAAAG ACCCTTCTGTTCGGCTCTACCTTTTGCTGCTTCAGTGAAGAATGGAAACTCCAGAACTTTTCCTTCAATGACATTGCCTCGTTAAAATACGGCATTGTGCAGAACAAGGGTGGTCCCTGTGGGGTTCT GGCAGCAGTTCAAGGCTGTGTGCTTCAGAAACTCCTGTTTGAAGGAGATAACAGAATCAACTCTAATCTCCAGCTGCAGCCCTCAGATGCCCAGAGGACTCGCTGCCTTGCCCTGGCCATTGCAGACA TCCTGTGGCGAGCTGGAGGCAAAGAGCAAGCCGTGGTTGCACTGGCTTCAGGAACACCGCACTTCAGTCCAACAGGGAAATACAAAGCAGACGGAGTCTTAGAAACACTCACACTGTATAGTTTGACC AGCTCTGAGGACCTGGTGACTTTTCTCCAGCAGAGCGTTCATCAGTTCGAAGCGGGACCCTACGGTTGCATCCTGCTCACCTTGTCTGCCATCTTGTCCAGATCCCTAGAGCTTGTCCGCCAGGACTT TGATGTCCCCACCAGCCATCTCATTGGAGCTCACGGATACTGCACACAGGAACTTGTCAATCTTCTCCTGACCGGGAGAGCCGTGTCTAATGTTTTCAATGATGTAGTGGAGCTGGACTCGGGCGATG GGAACATCACGCTTCTCCGAGGCATTGAGGCACGCAGTGACATCGGTTTCTTATCTCTCTTTGAACACTACAATGTGTGCCAGGTTGGCTGCTTCCTGAAGACCCCAAGGTTCCCCATCTGGGTGGTC TGCAGTGAGAGCCACTTCAGCATCCTCTTCAGCCTACAGCCAGAGCTCTTGTGCGACTGGAAGTCTGAGCGGCTCTTTGACCTGTATTATTATGATGGCTTGGCCAACCAGCAGGAGGAGATACGGCT GACTGTTGATACCACCAAGACTGCCCCAGAGGACAACTGCAGTGACCTTGTCCCTCCTCTTGAGCTCTGTATCAGAACCAAGTGGAAGGGGGCATCTGTGAACTGGAATGGCTCAGACCCCATCCTGT GACCCTTGGATGCATGGAGTTCTATGGCTTCAGCACTCATCACTGGGATGACCCCTGGACCCCAGGTTTTAGGGTCATGTCTCTTAGAGGAGTCACCCTGCCAGAGTTTGCATGGCCACAGAGGCATG TGGAGTCTTCCAGTTCCTTCCATAAAGGGCTGTGGTAGGGTCCTGTGCACTGTTGATGTCCCTCCTGGCCCACCTGTGACTGCCAAAGACAGGAAGGAGGCCACCAGAGACTCTGCTGCCTTTCGTTT GCATCCTTCTTGGATAGCCCTCTCTCTAAGGCTTCTGGTGTCACTGGCCTTGGGGACTCTGGAGCCTTGTTACTGCAGCTTCCATAAAGCAACAGTCAAGCCTATGACTAGGGCCAAGACTTTGTGGT TCATTGGTGTGAGTGGAACACAGGTCTGCTCTCAGCATGGCTAAGATGGGACAGACGGGTGGAGACCCAGGACCCCGACTGGCAAAGCATCTCCTAGCCAAGATCTGAGGACAAACCCTGCCCTTTGT CCCAGAGTTGTCCTCGACTGGGTCCCCAGGTCTCTCAGTTTTCCACAGGAGCAGCATAGTCCAAGATACAAGCTACCAAGAGCAGCCAAAGGTCTGGAGAGCCCAATTCAGGGAAGACCTGGCTGTCT TGTGAAGCCACATGAGGATGGGGTGGGCAAGGGTAGAACGCTACCCAGGAAGTGACTTCTTGCCCAGACAAGCAAAAATGATGGAGACAAGCAGAGGGATCAGGTGTCAACTTCCCTGTGGCTATGGG GAGAACTGGCTGCTGTGGGAGTGGGCAGGGCTTTAGATGAACTCACATTGCAGAATAAGAGAGGTTGGATGGGAAGATGGTATGTCACCACATGTTGTACATCCTCTGGCTTTTGTCATGAAGGGTGA TAAAACAGCAATGGGTAGCTAGGGAAGGTGCTGGCTGGTTCAGAGCCAGAGTCCAGGGCTGCTTGCAGCAGTTACAAGAGGTACCCTAGGGGTAAAGCTCCAGACCTCAGAGTCCCCGCCACATGACT ATCCAACTAGGATACCTCCTCCCCTAGCCTGGCAGCCCATGGAGTTTAGGAGCCTAGCTGCTCTAGGCTGTGTCCTCTGTAGTAAGAGGTCTCCTCGCTGTAAGAAGAAACCCCCTCCTTTAAGGAGT TAGGGATGTAGTGGGGGACAACTACAGAGCTTGTCTTGTGTTCCTAGGGCACATGCCGTGTCCCAACTGCAGATTTTTGCAGAGGCAGGGAGGAGCCAACTATGCCATAGGAGAAGCAGAGGGCGGGA AGGGCTGTGTCCTGCCCCAGGCTCCCTGGGGGCTTACTGTGTAAACTTTAGTGGCCATTCACAGCAGGTTCCCAGTAGAAATGCTTCCTATATCTCCTTGAAATGTTTATGCATTTGTTTTCCTTGGC CAGAGATGGACAGCTGCAGAGTGCCTGGCTGAGGAAGTTGGTTTCCCTGCAATGACCTTGTTTATCGGCCTGGGGAGGAAAAGTATCTTTTCAATGAAACCCACTTAGTCTCCTTGCCAGGGGCTCTT TGGCAGGGCTAGAGAAAACAAACAATTCCCAGCATTACTGCAGAAGGTTGACCCAACAAAGCACAGAGCTTGCTCTTCTCGGAGCCCTGATGCAGATACACAAGTACTACGCTGTGGAGAGGAAGGTA GGCAGAGATGGGTATAACTGCTCCCAGGCTTTGAAGCCTTTTCAGTAACACTCTTAGGGCTGTAGGACCGAAACCCCTCCTCACAAGGGGACAGTGTTCTCTGTGGGTGCAGTGGTAGGCGTCACAGC CCTCTCCCGAACTGCATTAAAAACATTAATGCTCACATACATATGTGCTAAGGGCCTGTACTTTTCTGTCTCTGTTACTCTAAGTGGAGACAAATTCCTACTCTTTTTCTGTTGACTTTGCTTTCTCT TTAGCATTTGCTTCTTGATCTAGAGAGGGACACACAGGCCGTGACTGTTGATTTTTGACATTATGCAGCGTGTGTGGAACCTGTGTAATGGCCACTTAACTCCAAACTCTCCTGAGGAAAGTCCTCCC TTCCCCTGAGATGTTCATCTGAACAGGTGCCGGGGCAGCCTGTTTTCACTTCCCAGCCTTGCTCCAGGAGACCTCCAGACCCAGAACCACCCCTGGCTCTTTCAGAGAAGAGGGTCAGCCAGACAGTT GTTTGCTGTTTTGACTTTGTATTGATTCTTTTCGAGTTTCCCATCATGCACCTCAGTCCTGCTCATCTCCTCATAGCCATCCTTTGCCCTTGCAACCTCCCCAGCCAAACAAAAAACAAAACAGCCCC CTCCCCCCCAAGCAAAGCAGAGAAAACATCTCATTGTAGAAGCTGTATCATGTCACTGTGTGTCCCCTTTGGTCCACGCACCTTCACTGGTAAATGTTCATTGCAATGAGTCATTGGTCTGGTTTGAG GTCTCTGGCTTCTGTGACACCATTAATATTGAATCCTCACTGGTACTTCTTCCAGTTATCCTGTTGTTGCCCTGTGTCATGGAGATCCTGCAGCTTTGACAGCAGAACCGACCCTTTTACTTGTCCCA GCTGCTCACAGATGATGTAGATTTTGGGGTGGGCCAACTCAGAGCCCTGGATCTGGGCCTGTGAGGTAGCTGAGTTGGTCAGCCCTTGGCTGTCTCTTATCAGCACCACCAGGGTGAGCTCTCCAGCA CTGCCTTGTCTAGGCCACCCCATGCCTCCATTGCAGGAAGCAATGTTAACTCTCTTGCTCTCATGCCCATGCTCTCACCTGCACCCACACCTCCAGAGCCAGCTCCACTGTGCTGCCCAGTCAAGGTT CAGGACCCACTCTCCCAAGTGCTGCAGCCTGAAAGGGGCAAGGACAGCTCTTTTGCTCTCATGACACCCCTCCCCCCTCAACCGGGGTCAGTTCCTCCTACTGCCACAGGTGGTGGGGGATGAGAGGG CTAAGGGCACCCCTGCACCCACGCCACCTTAATGCAGACCAATGGCAGGCCAACTATGCCTCTCTCACAGCTCACACTCTTGGGGTGAGCTCACCCACACCCCTGTACTGCCCAGTGAAGATGCAGGA CCTACTCTCCTGAGTGCTGAGTGCTGGGCTAGCTCCACTGGGCTCAGTCTTCCCAATTGCTGGAGGTGGCAAGAGGTGTGGGGATCACCTCTCCCAAACCACCACTACCAGGGCCCACTCCATGGTGC TGCCTGGGTGAGGTACAGGGCCCCTTTCACTGTCAGTGAGATGAAACCAGCTCTCCAGAGTACCACAGCCAGTGAGGGATGGAGCCAGCTCTGTACAGCCCCTGGACGTCCACATGGTCCCCAGTAGC TGCCCCTACCACAGATGGGTCCCCATGTTCTCTAGTGGTAATATGAGCCATAGACATCAACACTGACCCCTGCAGCTGCATAGCTACAGATGCAGACATGGCCCATGGCTCCGGGTGGCAGGGCTGGT CACTCGCAATAGGATACTCCTCTCTACCCCCCAGTCCTCAGTTCCATCTCTCTTCATGATGCACACTGTGGTGGCTTTGACATCTGACCACCACATATTTGCACCTTGTGGTGACTCCTGCTGCTGTC TGACCACACACCTGACAAGCTCCCAGGTGACAGTCTCCATCAGCGTTATGTGGTGTGGTAGCAAAGAGGTGCCTATGCCGTGCTCCAGAGGGCAGGAGCTAGACAATCCTGACCTGTATGCTGCGGCC GTTCTAGAGGCTGCTCTTTGCCACCAGTAGGCACACAGAGAGTTCTGGCTCCTTCGTTTCTCAGGATGTTTTATGTGGGGGAGTCCTCCCTCATCTACTTAGGGCAGGCCAGCTCTTCAGTGGGGACA GCCTCTCTCCCATTCCTTGTGTGGAACACCAAGTCTTTCCTCCATGGAATCCATTTGCGAGCCATGTGAAGCCCGTGTGTCCTTCCGTGCACACAGGATTAGCACACACAGGATCAGCTCTGAGTGCT CTGTGCCTTGGCTTTTGCCATAACTTTACCCAGGAGACCCAGCCACCATTCCTTCCATCAGGAGTGGGCGGGTTGTCCACTTGGGCACATTAGTTTTTTCTGTCTTGCTTTTCAAGACAGTTTCTCTG CTTAGATAGAGTTTCTCTCTTTAGCCCTGGCTGTCCTGGAACTCGCTCTGTAGATCTGGCTTACCTTGGACTCGGAGATCCACCTGCCTCTGCCTCCTGAGTGCTGAGATTAAAGGTGTGTGCTGTCA
hide sequence
RefSeq Acc Id:
XR_005503604
Type:
NON-CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 4 85,689,050 - 85,774,462 (+) NCBI mRatBN7.2 4 84,358,660 - 84,444,208 (+) NCBI
RefSeq Acc Id:
XR_005503605
Type:
NON-CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 4 85,689,050 - 85,745,051 (+) NCBI mRatBN7.2 4 84,358,675 - 84,414,870 (+) NCBI
RefSeq Acc Id:
XP_231787 ⟸ XM_231787
- Peptide Label:
isoform X2
- Sequence:
MDSLYVEEVAASLVREFLSRKGLNKTFMTMDQERPRCELSINSRNDLRRVLHLEFLYKENKTKEKPLKTNLELITRYFLDHFGNTDSTESQEAPIPAIPIPKKNSKLPLRYPEATLVNIYDLSDEDTG RRTSWSETGKARHDNLDGDIFGNFMSSKKNPYKSKPAHMVLGDSLPLVPAWEKVDQLHSSEPGIDMKRTVERTRPKSGLIVRGMMAGPVASSSQDSFRKRSLRRSSTLSRKLQAPEESQQQSEPFVHT PVCPGPQEVSASSSDSFSRSPLGQLNELSIEKPNATPSSQGPCQRDRPRLRSISEDSPLGYSHTEIITTPLRLDLPDGNSRMPQERLERAFKRQGGQPPSLRKSQLVSDRTGDKPDALQLEDVEDELI KEDIVLFPPPSMLKLLTVSKPIDLSLAKEIKTLLFGSTFCCFSEEWKLQNFSFNDIASLKYGIVQNKGGPCGVLAAVQGCVLQKLLFEGDNRINSNLQLQPSDAQRTRCLALAIADILWRAGGKEQAV VALASGTPHFSPTGKYKADGVLETLTLYSLTSSEDLVTFLQQSVHQFEAGPYGCILLTLSAILSRSLELVRQDFDVPTSHLIGAHGYCTQELVNLLLTGRAVSNVFNDVVELDSGDGNITLLRGIEAR SDIGFLSLFEHYNVCQVGCFLKTPRFPIWVVCSESHFSILFSLQPELLCDWKSERLFDLYYYDGLANQQEEIRLTVDTTKTAPEDNCSDLVPPLELCIRTKWKGASVNWNGSDPIL
hide sequence
Ensembl Acc Id:
ENSRNOP00000015469 ⟸ ENSRNOT00000015469
RefSeq Acc Id:
XP_038964608 ⟸ XM_039108680
- Peptide Label:
isoform X1
RefSeq Acc Id:
XP_038964609 ⟸ XM_039108681
- Peptide Label:
isoform X3
Ensembl Acc Id:
ENSRNOP00000082940 ⟸ ENSRNOT00000109254
RefSeq Acc Id:
XP_063143032 ⟸ XM_063286962
- Peptide Label:
isoform X4
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2018-02-12
Mindy4
MINDY lysine 48 deubiquitinase 4
Fam188b
family with sequence similarity 188, member B
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2010-05-05
Fam188b
family with sequence similarity 188, member B
RGD1562590
similar to hypothetical protein
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2008-04-30
RGD1562590
similar to hypothetical protein
RGD1562590_predicted
similar to hypothetical protein (predicted)
'predicted' is removed
2292626
APPROVED
2006-03-07
RGD1562590_predicted
similar to hypothetical protein (predicted)
LOC312365
similar to hypothetical protein
Symbol and Name status set to approved
1299863
APPROVED
2006-02-09
LOC312365
similar to hypothetical protein
Symbol and Name status set to provisional
70820
PROVISIONAL