Mindy4 (MINDY lysine 48 deubiquitinase 4) - Rat Genome Database

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Gene: Mindy4 (MINDY lysine 48 deubiquitinase 4) Rattus norvegicus
Analyze
Symbol: Mindy4
Name: MINDY lysine 48 deubiquitinase 4
RGD ID: 1562590
Description: Predicted to enable K48-linked deubiquitinase activity. Predicted to be involved in protein K48-linked deubiquitination and proteolysis. Orthologous to human MINDY4 (MINDY lysine 48 deubiquitinase 4); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Fam188b; family with sequence similarity 188, member B; LOC312365; probable ubiquitin carboxyl-terminal hydrolase MINDY-4; RGD1562590; similar to hypothetical protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8485,689,049 - 85,797,553 (+)NCBIGRCr8
mRatBN7.2484,358,660 - 84,469,189 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl484,358,902 - 84,463,395 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0485,427,741 - 85,536,264 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl485,427,555 - 85,532,238 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04150,079,958 - 150,188,230 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4483,974,751 - 84,079,264 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera479,225,891 - 79,334,406 (+)NCBICelera
Cytogenetic Map4q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mindy4RatCharcot-Marie-Tooth disease type 2  ISOMINDY4 (Homo sapiens)8554872ClinVar Annotator: match by term: Charcot-Marie-Tooth disease type 2ClinVarPMID:28492532
Mindy4RatEhlers-Danlos syndrome kyphoscoliotic type 2  ISOMINDY4 (Homo sapiens)8554872ClinVar Annotator: match by term: Ehlers-Danlos syndrome more ...ClinVarPMID:28492532
Mindy4Ratpleomorphic xanthoastrocytoma  ISOMINDY4 (Homo sapiens)8554872ClinVar Annotator: match by term: Pleomorphic xanthoastrocytomaClinVarPMID:28299358

1 to 20 of 50 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mindy4Rat(1->4)-beta-D-glucan multiple interactionsISOMindy4 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of MINDY4 mRNACTDPMID:36331819
Mindy4Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of MINDY4 mRNACTDPMID:33387578
Mindy4Rat3,4-methylenedioxymethamphetamine increases expressionISOMindy4 (Mus musculus)6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of MINDY4 mRNACTDPMID:20188158
Mindy4Rat6-propyl-2-thiouracil increases expressionEXP 6480464Propylthiouracil results in increased expression of FAM188B mRNACTDPMID:30047161
Mindy4Ratacrylamide decreases expressionEXP 6480464Acrylamide results in decreased expression of MINDY4 mRNACTDPMID:28959563
Mindy4Ratacrylamide decreases expressionISOMINDY4 (Homo sapiens)6480464Acrylamide results in decreased expression of MINDY4 mRNACTDPMID:32763439
Mindy4Rataflatoxin B1 increases methylationISOMINDY4 (Homo sapiens)6480464Aflatoxin B1 results in increased methylation of MINDY4 geneCTDPMID:27153756
Mindy4Rataflatoxin B1 decreases methylationISOMINDY4 (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of MINDY4 intronCTDPMID:30157460
Mindy4RatAflatoxin B2 alpha increases methylationISOMINDY4 (Homo sapiens)6480464aflatoxin B2 results in increased methylation of MINDY4 intronCTDPMID:30157460
Mindy4Ratall-trans-retinoic acid decreases expressionISOMINDY4 (Homo sapiens)6480464Tretinoin results in decreased expression of MINDY4 mRNACTDPMID:23724009
Mindy4Ratamitrole increases expressionEXP 6480464Amitrole results in increased expression of FAM188B mRNACTDPMID:30047161
Mindy4Ratantirheumatic drug increases expressionISOMINDY4 (Homo sapiens)6480464Antirheumatic Agents results in increased expression of MINDY4 mRNACTDPMID:24449571
Mindy4Ratarsane affects methylationISOMINDY4 (Homo sapiens)6480464Arsenic affects the methylation of MINDY4 geneCTDPMID:25304211
Mindy4Ratarsenic atom affects methylationISOMINDY4 (Homo sapiens)6480464Arsenic affects the methylation of MINDY4 geneCTDPMID:25304211
Mindy4Ratbenzo[a]pyrene decreases methylationISOMINDY4 (Homo sapiens)6480464Benzo(a)pyrene results in decreased methylation of FAM188B 3' UTRCTDPMID:27901495
Mindy4Ratbenzo[a]pyrene affects methylationISOMINDY4 (Homo sapiens)6480464Benzo(a)pyrene affects the methylation of FAM188B promoter more ...CTDPMID:27901495 and PMID:30157460
Mindy4Ratbenzo[e]pyrene increases methylationISOMINDY4 (Homo sapiens)6480464benzo(e)pyrene results in increased methylation of MINDY4 intron and benzo(e)pyrene results in increased methylation of MINDY4 polyA tailCTDPMID:30157460
Mindy4Ratbisphenol A decreases expressionEXP 6480464bisphenol A results in decreased expression of MINDY4 mRNACTDPMID:25181051
Mindy4Ratbisphenol A increases expressionEXP 6480464bisphenol A results in increased expression of MINDY4 mRNACTDPMID:30816183
Mindy4Ratcadmium atom multiple interactionsISOMindy4 (Mus musculus)6480464[Cadmium Chloride results in increased abundance of Cadmium] which results in increased expression of MINDY4 mRNACTDPMID:37325564

1 to 20 of 50 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mindy4Ratprotein K48-linked deubiquitination involved_inIEAInterPro:IPR0397851600115GO_REF:0000002InterProGO_REF:0000002
Mindy4Ratproteolysis involved_inIEAUniProtKB-KW:KW-06451600115GO_REF:0000043UniProtGO_REF:0000043

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mindy4Ratcysteine-type deubiquitinase activity enablesIEAEC:3.4.19.121600115GO_REF:0000003UniProtGO_REF:0000003
Mindy4Ratcysteine-type deubiquitinase activity enablesIEAUniRule:UR0014197551600115GO_REF:0000104UniProtGO_REF:0000104
Mindy4RatK48-linked deubiquitinase activity enablesIBAPANTHER:PTN000279908 and UniProtKB:Q9H8M71600115GO_REF:0000033GO_CentralGO_REF:0000033


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions


Mindy4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8485,689,049 - 85,797,553 (+)NCBIGRCr8
mRatBN7.2484,358,660 - 84,469,189 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl484,358,902 - 84,463,395 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0485,427,741 - 85,536,264 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl485,427,555 - 85,532,238 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04150,079,958 - 150,188,230 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4483,974,751 - 84,079,264 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera479,225,891 - 79,334,406 (+)NCBICelera
Cytogenetic Map4q24NCBI
MINDY4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38730,771,417 - 30,892,387 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl730,771,417 - 30,892,387 (+)EnsemblGRCh38hg38GRCh38
GRCh37730,811,033 - 30,932,002 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36730,777,558 - 30,898,527 (+)NCBINCBI36Build 36hg18NCBI36
Celera730,800,258 - 30,921,208 (+)NCBICelera
Cytogenetic Map7p14.3NCBI
HuRef730,693,266 - 30,814,224 (+)NCBIHuRef
CHM1_1730,811,313 - 30,931,937 (+)NCBICHM1_1
T2T-CHM13v2.0730,909,066 - 31,030,035 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2730,860,569 - 30,981,508 (+)NCBI
Mindy4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39655,180,337 - 55,297,208 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl655,180,368 - 55,297,207 (+)EnsemblGRCm39 Ensembl
GRCm38655,203,350 - 55,320,223 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl655,203,383 - 55,320,222 (+)EnsemblGRCm38mm10GRCm38
MGSCv37655,153,377 - 55,270,216 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36655,132,961 - 55,208,203 (+)NCBIMGSCv36mm8
Celera655,739,391 - 55,854,058 (+)NCBICelera
Cytogenetic Map6B3NCBI
cM Map627.38NCBI
Mindy4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541031,943,915 - 32,046,747 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541031,944,140 - 32,047,112 (+)NCBIChiLan1.0ChiLan1.0
MINDY4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2635,582,264 - 35,703,509 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1783,907,207 - 84,028,237 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0731,384,527 - 31,505,551 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1731,504,351 - 31,625,097 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl731,504,351 - 31,625,097 (+)Ensemblpanpan1.1panPan2
MINDY4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11443,469,740 - 43,573,999 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1443,469,784 - 43,573,999 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1442,902,094 - 43,006,260 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01443,410,405 - 43,514,614 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1443,410,440 - 43,514,478 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11443,526,190 - 43,630,289 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01443,202,334 - 43,306,793 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01443,563,818 - 43,668,049 (+)NCBIUU_Cfam_GSD_1.0
Mindy4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511887,801,612 - 87,915,001 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364787,013,274 - 7,126,749 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364787,013,419 - 7,126,734 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MINDY4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1842,096,353 - 42,200,694 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11842,096,351 - 42,202,511 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
MINDY4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12127,473,251 - 27,621,772 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2127,489,814 - 27,621,647 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604277,082,635 - 77,214,575 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mindy4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478330,277 - 146,184 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478330,259 - 146,524 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Mindy4
858 total Variants

Predicted Target Of
Summary Value
Count of predictions:352
Count of miRNA genes:217
Interacting mature miRNAs:253
Transcripts:ENSRNOT00000015469, ENSRNOT00000064923, ENSRNOT00000065400, ENSRNOT00000074425
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 54 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1549843Bw53Body weight QTL 530.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658103194791Rat
61445Strs3Sensitivity to stroke QTL 33cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)44043338885433388Rat
6893678Bw108Body weight QTL 1082.60.006body mass (VT:0001259)body weight (CMO:0000012)44345797688457976Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
1357342Bw40Body weight QTL 400.001body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
631556Bp135Blood pressure QTL 1350.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)478881294117676292Rat
1358363Sradr3Stress Responsive Adrenal Weight QTL 36.19adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)457486946102486946Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)470362013132642728Rat
70167Bw22Body weight QTL 223.1body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat

1 to 10 of 54 rows
RH135394  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2484,457,372 - 84,458,689 (+)MAPPERmRatBN7.2
mRatBN7.2484,458,475 - 84,458,689 (+)MAPPERmRatBN7.2
Rnor_6.0485,527,460 - 85,527,673NCBIRnor6.0
Rnor_6.0485,526,336 - 85,527,673NCBIRnor6.0
Rnor_5.04150,179,426 - 150,179,639UniSTSRnor5.0
Rnor_5.04150,178,512 - 150,179,639UniSTSRnor5.0
RGSC_v3.4484,073,187 - 84,074,524UniSTSRGSC3.4
RGSC_v3.4484,074,311 - 84,074,524UniSTSRGSC3.4
Celera479,325,602 - 79,325,815UniSTS
Celera479,324,492 - 79,325,815UniSTS
RH 3.4 Map4527.8UniSTS
Cytogenetic Map4q24UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000015469   ⟹   ENSRNOP00000015469
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl484,358,902 - 84,463,395 (+)Ensembl
Rnor_6.0 Ensembl485,427,555 - 85,532,238 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000109254   ⟹   ENSRNOP00000082940
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl484,358,902 - 84,425,237 (+)Ensembl
RefSeq Acc Id: XM_039108680   ⟹   XP_038964608
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8485,689,050 - 85,797,553 (+)NCBI
mRatBN7.2484,358,787 - 84,469,189 (+)NCBI
RefSeq Acc Id: XM_039108681   ⟹   XP_038964609
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8485,726,358 - 85,797,553 (+)NCBI
mRatBN7.2484,397,041 - 84,469,189 (+)NCBI
RefSeq Acc Id: XM_063286962   ⟹   XP_063143032
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8485,689,050 - 85,724,198 (+)NCBI
RefSeq Acc Id: XM_231787   ⟹   XP_231787
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8485,689,049 - 85,797,553 (+)NCBI
mRatBN7.2484,358,792 - 84,469,189 (+)NCBI
Rnor_6.0485,427,741 - 85,536,264 (+)NCBI
Rnor_5.04150,079,958 - 150,188,230 (+)NCBI
RGSC_v3.4483,974,751 - 84,079,264 (+)RGD
Sequence:
RefSeq Acc Id: XR_005503604
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8485,689,050 - 85,774,462 (+)NCBI
mRatBN7.2484,358,660 - 84,444,208 (+)NCBI
RefSeq Acc Id: XR_005503605
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8485,689,050 - 85,745,051 (+)NCBI
mRatBN7.2484,358,675 - 84,414,870 (+)NCBI
1 to 9 of 9 rows
Protein RefSeqs NP_001418650 (Get FASTA)   NCBI Sequence Viewer  
  XP_038964608 (Get FASTA)   NCBI Sequence Viewer  
  XP_038964609 (Get FASTA)   NCBI Sequence Viewer  
  XP_063143032 (Get FASTA)   NCBI Sequence Viewer  
  XP_231787 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL88092 (Get FASTA)   NCBI Sequence Viewer  
  EDL88093 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000015469.6
  ENSRNOP00000082940.1
1 to 9 of 9 rows
RefSeq Acc Id: XP_231787   ⟸   XM_231787
- Peptide Label: isoform X2
- Sequence:
Ensembl Acc Id: ENSRNOP00000015469   ⟸   ENSRNOT00000015469
RefSeq Acc Id: XP_038964608   ⟸   XM_039108680
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038964609   ⟸   XM_039108681
- Peptide Label: isoform X3
Ensembl Acc Id: ENSRNOP00000082940   ⟸   ENSRNOT00000109254
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZJJ0-F1-model_v2 AlphaFold D3ZJJ0 1-756 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 15 of 15 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-44734 BioCyc
Ensembl Genes ENSRNOG00000011530 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000015469.9 UniProtKB/TrEMBL
  ENSRNOT00000109254.1 UniProtKB/TrEMBL
InterPro DUF4205 UniProtKB/TrEMBL
  MINY3/4 UniProtKB/TrEMBL
NCBI Gene 312365 ENTREZGENE
PANTHER PTHR12473 UniProtKB/TrEMBL
  UBIQUITIN CARBOXYL-TERMINAL HYDROLASE MINDY-4-RELATED UniProtKB/TrEMBL
Pfam DUF4205 UniProtKB/TrEMBL
PhenoGen Mindy4 PhenoGen
RatGTEx ENSRNOG00000011530 RatGTEx
SMART DUF4205 UniProtKB/TrEMBL
UniProt A0A8I5ZUV8_RAT UniProtKB/TrEMBL
  D3ZJJ0 ENTREZGENE, UniProtKB/TrEMBL
1 to 15 of 15 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-02-12 Mindy4  MINDY lysine 48 deubiquitinase 4  Fam188b  family with sequence similarity 188, member B  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-05-05 Fam188b  family with sequence similarity 188, member B  RGD1562590  similar to hypothetical protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1562590  similar to hypothetical protein   RGD1562590_predicted  similar to hypothetical protein (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1562590_predicted  similar to hypothetical protein (predicted)  LOC312365  similar to hypothetical protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC312365  similar to hypothetical protein      Symbol and Name status set to provisional 70820 PROVISIONAL