Map2k7 (mitogen activated protein kinase kinase 7) - Rat Genome Database

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Gene: Map2k7 (mitogen activated protein kinase kinase 7) Rattus norvegicus
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Symbol: Map2k7
Name: mitogen activated protein kinase kinase 7
RGD ID: 1560043
Description: Enables several functions, including ATP binding activity; JUN kinase kinase activity; and magnesium ion binding activity. Involved in several processes, including MAPK cascade; cellular response to sorbitol; and positive regulation of JNK cascade. Predicted to be located in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in colon adenocarcinoma; lung adenocarcinoma; lung carcinoma; and lung non-small cell carcinoma. Orthologous to human MAP2K7 (mitogen-activated protein kinase kinase 7); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; adenosine signaling pathway; FasL mediated signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; cadmium atom.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: c-Jun N-terminal kinase kinase 2; dual specificity mitogen-activated protein kinase kinase 7; JNK kinase 2; JNK-activating kinase 2; JNKK; JNKK 2; Jnkk2; MAP kinase kinase 7; MAPK/ERK kinase 7; MAPKK 7; Mapkk7; MEK 7; Mek7; Mkk7
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8127,389,032 - 7,398,377 (+)NCBIGRCr8
mRatBN7.2122,591,312 - 2,600,534 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl122,591,219 - 2,604,222 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx123,239,383 - 3,248,497 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0123,862,974 - 3,872,088 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0122,626,083 - 2,635,208 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0122,546,278 - 2,555,310 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl122,548,218 - 2,555,164 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0124,698,912 - 4,708,078 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4121,545,407 - 1,552,353 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera124,407,043 - 4,413,990 (+)NCBICelera
Cytogenetic Map12p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Original Reference(s)
Map2k7Ratbreast cancer  ISORGD:1347407155230826mRNA:splice variant:exon 2: (human)RGD 
Map2k7Ratbreast cancer exacerbatesISORGD:1557151155249848 RGD 
Map2k7Ratcolon adenocarcinoma  ISORGD:1347407155630593human cell line and gene in a mouse modelRGD 
Map2k7Ratcolon cancer  ISORGD:1347407155230826mRNA:splice variant:exon 2: (human)RGD 
Map2k7Ratesophageal carcinoma exacerbatesISORGD:1347407155630592mRNA:decreased expression:espohagus (human)RGD 
Map2k7Ratlarynx cancer amelioratesISORGD:1347407155256869mRNA:increased expression:larynx (human)RGD 
Map2k7RatLiver Metastasis  ISORGD:1347407155259116associated with colon cancer;protein:increased expression:colon (human)RGD 
Map2k7Ratlung adenocarcinoma exacerbatesISORGD:1347407155230828human gene in a mouse modelRGD 
Map2k7Ratlung carcinoma exacerbatesISORGD:134740711529413DNA:missense mutation:CDS:p.E116K (human)RGD 
Map2k7Ratlung non-small cell carcinoma exacerbatesISORGD:1557151155249848 RGD 
Map2k7Ratlung non-small cell carcinoma susceptibilityISORGD:1347407155230827DNA:SNP:3' utr: (rs3679) (human)RGD 
Map2k7Ratlung squamous cell carcinoma  ISORGD:1557151155253742mRNA:decreased expression:lung (human)RGD 
Map2k7RatOvarian Neoplasms no_associationISORGD:15571512293338expression of the mouse gene has no effect on metastatic colonization of secondary sites by more ...RGD 
Map2k7Ratprostate cancer  ISORGD:1347407155230826mRNA:splice variant:exon 2: (human)RGD 
Map2k7Ratprostate carcinoma in situ disease_progressionISORGD:13474072293334 RGD 
Map2k7RatProstatic Neoplasms  ISORGD:13474072293334 RGD 
Map2k7RatProstatic Neoplasms disease_progressionISORGD:15571512293337expression of the mouse gene inhibits metastatic colonization of secondary sites by cancer cells in more ...RGD 
Map2k7Ratstomach cancer  ISORGD:1347407155230826mRNA:splice variant:exon 2: (human)RGD 
Map2k7Raturinary bladder cancer  ISORGD:1347407155230826mRNA:splice variant:exon 2: (human)RGD 
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Original Reference(s)
Map2k7Ratfamilial hemophagocytic lymphohistiocytosis 5  ISORGD:13474078554872ClinVar Annotator: match by term: Familial hemophagocytic lymphohistiocytosis 5ClinVarPMID:28492532
Map2k7Ratmucolipidosis type IV  ISORGD:13474078554872ClinVar Annotator: match by term: Mucolipidosis type IVClinVarPMID:11030752|PMID:11317355|PMID:28492532
Map2k7Ratneuroblastoma  ISORGD:13474078554872ClinVar Annotator: match by term: NeuroblastomaClinVarPMID:26822237
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Original Reference(s)
Map2k7RatBreast Neoplasms  ISORGD:134740711554173CTD Direct Evidence: marker/mechanismCTDPMID:21317887
Map2k7Ratcongestive heart failure  ISORGD:134740711554173CTD Direct Evidence: marker/mechanismCTDPMID:21284947
Map2k7RatExperimental Mammary Neoplasms  ISORGD:134740711554173CTD Direct Evidence: marker/mechanismCTDPMID:21317887
Map2k7RatFibrosis  ISORGD:134740711554173CTD Direct Evidence: marker/mechanismCTDPMID:21284947
Map2k7RatLung Neoplasms  ISORGD:134740711554173CTD Direct Evidence: marker/mechanismCTDPMID:21317887
Map2k7Ratpre-malignant neoplasm  ISORGD:134740711554173CTD Direct Evidence: marker/mechanismCTDPMID:21317887
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Map2k7Ratschizophrenia  ISSRGD:155715113592920OMIM:181500MouseDO 

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Map2k7Rat(S)-nicotine multiple interactionsISORGD:15571516480464[Nicotine co-treated with 1-Methyl-4-phenyl-1,2,3,6-tetrahydropyridine] results in decreased expression of MAP2K7 mRNA; Nicotine inhibits the reaction more ...CTDPMID:20230807
Map2k7Rat1,2-dimethylhydrazine decreases expressionISORGD:155715164804641,2-Dimethylhydrazine results in decreased expression of MAP2K7 mRNACTDPMID:22206623
Map2k7Rat1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine multiple interactionsISORGD:15571516480464[Caffeine co-treated with 1-Methyl-4-phenyl-1,2,3,6-tetrahydropyridine] results in increased expression of MAP2K7 mRNA; [Nicotine co-treated with 1-Methyl-4-phenyl-1,2,3,6-tetrahydropyridine] more ...CTDPMID:20230807
Map2k7Rat1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine increases expressionISORGD:155715164804641-Methyl-4-phenyl-1,2,3,6-tetrahydropyridine results in increased expression of MAP2K7 mRNACTDPMID:20230807
Map2k7Rat17alpha-ethynylestradiol increases expressionISORGD:15571516480464Ethinyl Estradiol results in increased expression of MAP2K7 mRNACTDPMID:17942748
Map2k7Rat17alpha-ethynylestradiol multiple interactionsISORGD:15571516480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of MAP2K7 mRNACTDPMID:17942748
Map2k7Rat17beta-estradiol multiple interactionsISORGD:15571516480464ESR1 protein promotes the reaction [Estradiol results in decreased expression of MAP2K7 mRNA]CTDPMID:25210133
Map2k7Rat17beta-estradiol decreases expressionISORGD:15571516480464Estradiol results in decreased expression of MAP2K7 mRNACTDPMID:25210133
Map2k7Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISORGD:15571516480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of MAP2K7 mRNACTDPMID:17942748
Map2k7Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of MAP2K7 mRNACTDPMID:32109520
Map2k7Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISORGD:13474076480464Tetrachlorodibenzodioxin promotes the reaction [AHRR protein binds to MAP2K7 gene]CTDPMID:28681081
Map2k7Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISORGD:15571516480464Tetrachlorodibenzodioxin affects the expression of MAP2K7 mRNACTDPMID:21570461
Map2k7Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISORGD:15571516480464Tetrachlorodibenzodioxin results in decreased expression of MAP2K7 mRNACTDPMID:19770486
Map2k7Rat3,4-methylenedioxymethamphetamine decreases expressionISORGD:15571516480464N-Methyl-3,4-methylenedioxyamphetamine results in decreased expression of MAP2K7 mRNACTDPMID:19285098|PMID:26251327
Map2k7Rat4,4'-diaminodiphenylmethane increases expressionISORGD:155715164804644,4'-diaminodiphenylmethane results in increased expression of MAP2K7 mRNACTDPMID:18648102
Map2k7Rat5-fluorouracil decreases expression ISORGD:13474071556305955-fluorouracil decreases expression of MAP2K7 protein in tongue squamous carcinoma cellsRGD 
Map2k7Ratafimoxifene decreases response to substanceISORGD:13474076480464MAP2K7 results in decreased susceptibility to afimoxifeneCTDPMID:21233418
Map2k7Rataflatoxin B1 increases methylationISORGD:13474076480464Aflatoxin B1 results in increased methylation of MAP2K7 intronCTDPMID:30157460
Map2k7Ratalpha-Chaconine multiple interactionsISORGD:15571516480464alpha-chaconine inhibits the reaction [lipopolysaccharide, Escherichia coli O111 B4 results in increased phosphorylation of MAP2K7 more ...CTDPMID:25913072
Map2k7Ratandrographolide multiple interactionsISORGD:13474076480464andrographolide inhibits the reaction [VEGFA protein results in increased phosphorylation of MAP2K7 protein]CTDPMID:24814888

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Biological Process
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Original Reference(s)
Map2k7Ratapoptotic process involved_inIEAUniProtKB-KW:KW-00531600115GO_REF:0000043UniProtGO_REF:0000043
Map2k7Ratcellular response to interleukin-1 involved_inIEAUniProtKB:Q8CE90|ensembl:ENSMUSP000000030271600115GO_REF:0000107EnsemblGO_REF:0000107
Map2k7Ratcellular response to interleukin-1 involved_inISORGD:15571511624291 PMID:9405446RGDPMID:9405446
Map2k7Ratcellular response to lipopolysaccharide involved_inISORGD:15571511624291 PMID:9405446RGDPMID:9405446
Map2k7Ratcellular response to lipopolysaccharide involved_inIEAUniProtKB:Q8CE90|ensembl:ENSMUSP000000030271600115GO_REF:0000107EnsemblGO_REF:0000107
Map2k7Ratcellular response to osmotic stress  IDA 2298561 RGD 
Map2k7Ratcellular response to sorbitol  IEP 7243113 RGD 
Map2k7RatJNK cascade  IDA 2298565 RGD 
Map2k7RatJNK cascade involved_inISORGD:15571511624291 PMID:11959862RGDPMID:11959862
Map2k7RatJNK cascade involved_inIEAUniProtKB:Q8CE90|ensembl:ENSMUSP000000030271600115GO_REF:0000107EnsemblGO_REF:0000107
Map2k7RatJNK cascade  IDA 2298567 RGD 
Map2k7RatJNK cascade  IDA 2298561 RGD 
Map2k7RatJNK cascade  IDA 2298577 RGD 
Map2k7RatMAPK cascade involved_inIEAGO:00047081600115GO_REF:0000108GOCGO_REF:0000108
Map2k7Ratpositive regulation of DNA-templated transcription involved_inISSUniProtKB:O147331600115GO_REF:0000024UniProtGO_REF:0000024
Map2k7Ratpositive regulation of DNA-templated transcription involved_inISORGD:13474071624291 PMID:28111074RGDPMID:28111074
Map2k7Ratpositive regulation of DNA-templated transcription involved_inIEAUniProtKB:O14733|ensembl:ENSP000003810661600115GO_REF:0000107EnsemblGO_REF:0000107
Map2k7Ratpositive regulation of ERK1 and ERK2 cascade involved_inISSUniProtKB:O147331600115GO_REF:0000024UniProtGO_REF:0000024
Map2k7Ratpositive regulation of ERK1 and ERK2 cascade involved_inIEAUniProtKB:O14733|ensembl:ENSP000003810661600115GO_REF:0000107EnsemblGO_REF:0000107
Map2k7Ratpositive regulation of ERK1 and ERK2 cascade involved_inISORGD:13474071624291 PMID:28111074RGDPMID:28111074
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Cellular Component
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Map2k7Ratcytoplasm located_inIEAUniProtKB:Q8CE90|ensembl:ENSMUSP000000030271600115GO_REF:0000107EnsemblGO_REF:0000107
Map2k7Ratcytoplasm located_inIEAUniProtKB-SubCell:SL-00861600115GO_REF:0000044UniProtGO_REF:0000044
Map2k7Ratcytoplasm located_inISORGD:15571511624291 PMID:9891090RGDPMID:9891090
Map2k7Ratcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
Map2k7Ratcytoplasm located_inISSUniProtKB:Q8CE901600115GO_REF:0000024UniProtGO_REF:0000024
Map2k7Ratnucleus located_inISORGD:15571511624291 PMID:9891090RGDPMID:9891090
Map2k7Ratnucleus located_inIEAUniProtKB-SubCell:SL-01911600115GO_REF:0000044UniProtGO_REF:0000044
Map2k7Ratnucleus located_inISSUniProtKB:Q8CE901600115GO_REF:0000024UniProtGO_REF:0000024
Map2k7Ratnucleus located_inIEAUniProtKB-KW:KW-05391600115GO_REF:0000043UniProtGO_REF:0000043
Map2k7Ratnucleus located_inIEAUniProtKB:Q8CE90|ensembl:ENSMUSP000000030271600115GO_REF:0000107EnsemblGO_REF:0000107
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Molecular Function
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Map2k7RatATP binding  IDA 2298561 RGD 
Map2k7RatATP binding enablesIEAInterPro:IPR0007191600115GO_REF:0000002InterProGO_REF:0000002
Map2k7RatATP binding enablesIEAUniProtKB-KW:KW-00671600115GO_REF:0000043UniProtGO_REF:0000043
Map2k7Ratenzyme binding enablesISORGD:13474071624291UniProtKB:P12821 PMID:14615289RGDPMID:14615289
Map2k7Ratenzyme binding enablesIEAUniProtKB:O14733|ensembl:ENSP000003810661600115GO_REF:0000107EnsemblGO_REF:0000107
Map2k7RatJUN kinase kinase activity  IDA 2298577 RGD 
Map2k7RatJUN kinase kinase activity enablesIBAMGI:1346871|PANTHER:PTN001220492|RGD:15600431600115GO_REF:0000033GO_CentralGO_REF:0000033
Map2k7RatJUN kinase kinase activity enablesISORGD:15571511624291 PMID:11959862, PMID:9405446RGDPMID:11959862|PMID:9405446
Map2k7RatJUN kinase kinase activity enablesIEAUniProtKB:Q8CE90|ensembl:ENSMUSP000000030271600115GO_REF:0000107EnsemblGO_REF:0000107
Map2k7RatJUN kinase kinase activity  IDA 2298561 RGD 
Map2k7RatJUN kinase kinase activity  IDA 2298565 RGD 
Map2k7Ratkinase activity enablesIEAUniProtKB-KW:KW-04181600115GO_REF:0000043UniProtGO_REF:0000043
Map2k7Ratmagnesium ion binding enablesIEAUniProtKB:O14733|ensembl:ENSP000003810661600115GO_REF:0000107EnsemblGO_REF:0000107
Map2k7Ratmagnesium ion binding enablesISORGD:13474071624291 PMID:9535930RGDPMID:9535930
Map2k7Ratmagnesium ion binding enablesIEAUniProtKB:Q8CE90|ensembl:ENSMUSP000000030271600115GO_REF:0000107EnsemblGO_REF:0000107
Map2k7Ratmagnesium ion binding enablesIDA 2298561PMID:10051439UniProt 
Map2k7Ratmagnesium ion binding enablesISORGD:15571511624291 PMID:9405446RGDPMID:9405446
Map2k7RatMAP kinase activity enablesIEAUniProtKB:Q8CE90|ensembl:ENSMUSP000000030271600115GO_REF:0000107EnsemblGO_REF:0000107
Map2k7RatMAP kinase activity enablesISORGD:15571511624291 PMID:9405446RGDPMID:9405446
Map2k7RatMAP kinase kinase activity  IDA 7243113 RGD 
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RGD Manual Annotations


  

Imported Annotations - SMPDB

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Map2k7Ratadenosine signaling pathway  ISORGD:134740710402751 SMPDBSMP:00320
Map2k7Ratadenosine signaling pathway  ISORGD:134740710402751 SMPDBSMP:00321
Map2k7RatFc epsilon receptor mediated signaling pathway  ISORGD:134740710402751 SMPDBSMP:00358

Imported Annotations - KEGG (archival)

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Imported Annotations - PID (archival)

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Map2k7RatFasL mediated signaling pathway   ISORGD:13474076484113 PIDPID:200080
Map2k7Ratplatelet-derived growth factor signaling pathway  ISORGD:13474076484113 PIDPID:200149
Map2k7RatReelin signaling pathway   ISORGD:13474076484113 PIDPID:200062
Map2k7Rattumor necrosis factor mediated signaling pathway   ISORGD:13474076484113 PIDPID:200102

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#
Reference Title
Reference Citation
1. Stress- and cell type-dependent regulation of transfected c-Jun N-terminal kinase and mitogen-activated protein kinase kinase isoforms. Butterfield L, etal., Biochem J. 1999 Mar 15;338 ( Pt 3):681-6.
2. Combined high energy of extracorporeal shock wave and 5-FU effectively suppressed the proliferation and growth of tongue squamous cell carcinoma. Chang CL, etal., Biomed Pharmacother. 2021 Oct;142:112036. doi: 10.1016/j.biopha.2021.112036. Epub 2021 Aug 16.
3. Prognostic significance of autophagy-related genes within esophageal carcinoma. Chen C, etal., BMC Cancer. 2020 Aug 24;20(1):797. doi: 10.1186/s12885-020-07303-4.
4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5. Activation of ASK1, downstream MAPKK and MAPK isoforms during cardiac ischaemia. Harding SJ, etal., Biochim Biophys Acta. 2010 Sep;1802(9):733-40. doi: 10.1016/j.bbadis.2010.06.005. Epub 2010 Jun 13.
6. The p38 kinases MKK4 and MKK6 suppress metastatic colonization in human ovarian carcinoma. Hickson JA, etal., Cancer Res. 2006 Feb 15;66(4):2264-70.
7. Genetic variants of JNK and p38α pathways and risk of non-small cell lung cancer in an Eastern Chinese population. Jia M, etal., Int J Cancer. 2017 Feb 15;140(4):807-817. doi: 10.1002/ijc.30508. Epub 2016 Nov 16.
8. The c-jun kinase/stress-activated pathway: regulation, function and role in human disease. Johnson GL and Nakamura K, Biochim Biophys Acta. 2007 Aug;1773(8):1341-8. Epub 2007 Jan 4.
9. Activated mitogen-activated protein kinase kinase 7 redistributes to the cytosol and binds to Jun N-terminal kinase-interacting protein 1 involving oxidative stress during early reperfusion in rat hippocampal CA1 region. Li CH, etal., J Neurochem. 2005 Apr;93(2):290-8.
10. JNK1/2 represses Lkb1-deficiency-induced lung squamous cell carcinoma progression. Liu J, etal., Nat Commun. 2019 May 14;10(1):2148. doi: 10.1038/s41467-019-09843-1.
11. Up-regulation of MKK4, MKK6 and MKK7 during prostate cancer progression: an important role for SAPK signalling in prostatic neoplasia. Lotan TL, etal., J Pathol. 2007 Aug;212(4):386-94.
12. An autophagy-related model of 4 key genes for predicting prognosis of patients with laryngeal cancer. Luo MS, etal., Medicine (Baltimore). 2020 Jul 24;99(30):e21163. doi: 10.1097/MD.0000000000021163.
13. The neuroprotective effects of K252a through inhibiting MLK3/MKK7/JNK3 signaling pathway on ischemic brain injury in rat hippocampal CA1 region. Pan J, etal., Neuroscience. 2005;131(1):147-59.
14. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
15. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
16. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
17. The MKK7 p.Glu116Lys Rare Variant Serves as a Predictor for Lung Cancer Risk and Prognosis in Chinese. Qiu F, etal., PLoS Genet. 2016 Mar 30;12(3):e1005955. doi: 10.1371/journal.pgen.1005955. eCollection 2016 Mar.
18. A tumor-associated splice-isoform of MAP2K7 drives dedifferentiation in MBNL1-low cancers via JNK activation. Ray D, etal., Proc Natl Acad Sci U S A. 2020 Jul 14;117(28):16391-16400. doi: 10.1073/pnas.2002499117. Epub 2020 Jun 29.
19. GOA pipeline RGD automated data pipeline
20. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
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PMID:9405446   PMID:9535930   PMID:9891090   PMID:11959862   PMID:14615289   PMID:14697235   PMID:20633641   PMID:21406225   PMID:21531765   PMID:22088537   PMID:25100604   PMID:26270349  
PMID:28111074  



Map2k7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8127,389,032 - 7,398,377 (+)NCBIGRCr8
mRatBN7.2122,591,312 - 2,600,534 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl122,591,219 - 2,604,222 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx123,239,383 - 3,248,497 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0123,862,974 - 3,872,088 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0122,626,083 - 2,635,208 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0122,546,278 - 2,555,310 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl122,548,218 - 2,555,164 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0124,698,912 - 4,708,078 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4121,545,407 - 1,552,353 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera124,407,043 - 4,413,990 (+)NCBICelera
Cytogenetic Map12p12NCBI
MAP2K7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38197,903,877 - 7,914,478 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl197,903,843 - 7,914,478 (+)EnsemblGRCh38hg38GRCh38
GRCh37197,968,762 - 7,979,363 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36197,874,765 - 7,885,363 (+)NCBINCBI36Build 36hg18NCBI36
Build 34197,874,764 - 7,885,362NCBI
Celera197,839,967 - 7,850,565 (+)NCBICelera
Cytogenetic Map19p13.2NCBI
HuRef197,639,009 - 7,649,623 (+)NCBIHuRef
CHM1_1197,968,237 - 7,978,836 (+)NCBICHM1_1
T2T-CHM13v2.0197,904,832 - 7,915,433 (+)NCBIT2T-CHM13v2.0
Map2k7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3984,288,740 - 4,297,897 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl84,288,865 - 4,301,423 (+)EnsemblGRCm39 Ensembl
GRCm39 Ensembl84,288,740 - 4,297,897 (+)EnsemblGRCm39 Ensembl
GRCm3884,238,740 - 4,247,897 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl84,238,865 - 4,251,423 (+)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl84,238,740 - 4,247,897 (+)EnsemblGRCm38mm10GRCm38
MGSCv3784,238,740 - 4,247,897 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3684,238,990 - 4,246,173 (+)NCBIMGSCv36mm8
Celera84,439,329 - 4,448,486 (+)NCBICelera
Cytogenetic Map8A1.1NCBI
cM Map81.99NCBI
Map2k7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555631,352,638 - 1,361,598 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555631,352,638 - 1,361,598 (-)NCBIChiLan1.0ChiLan1.0
MAP2K7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22012,586,639 - 12,597,308 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11911,702,668 - 11,714,508 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0197,205,124 - 7,215,776 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1198,058,431 - 8,068,555 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl198,057,598 - 8,066,512 (+)Ensemblpanpan1.1panPan2
MAP2K7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12052,594,450 - 52,604,236 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2052,594,536 - 52,602,150 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2052,396,989 - 52,406,782 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02053,122,659 - 53,132,453 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2053,122,690 - 53,132,448 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12052,325,934 - 52,335,725 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02052,770,533 - 52,780,328 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02053,001,904 - 53,011,707 (+)NCBIUU_Cfam_GSD_1.0
Map2k7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118212,942,983 - 212,952,496 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365884,882,184 - 4,892,071 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365884,882,191 - 4,891,807 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAP2K7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl271,298,325 - 71,308,124 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1271,299,010 - 71,308,432 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2271,699,410 - 71,708,529 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MAP2K7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.167,355,387 - 7,365,944 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl67,355,434 - 7,364,398 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666081448,367 - 458,990 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Map2k7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624828869,425 - 878,231 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624828869,424 - 878,358 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Map2k7
44 total Variants

Predicted Target Of
Summary Value
Count of predictions:83
Count of miRNA genes:75
Interacting mature miRNAs:82
Transcripts:ENSRNOT00000061821
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 20 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12119611090Rat
10755457Coatc14Coat color QTL 140.01759coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)12122591684Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12144503507Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12117200546172005Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7387292Kidm42Kidney mass QTL 423.030.0004kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)12136247923Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12144465750Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat

1 to 10 of 20 rows



alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000061821   ⟹   ENSRNOP00000058535
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl122,591,219 - 2,600,396 (+)Ensembl
Rnor_6.0 Ensembl122,548,218 - 2,555,164 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000084460   ⟹   ENSRNOP00000072160
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl122,591,478 - 2,604,222 (+)Ensembl
Rnor_6.0 Ensembl122,548,218 - 2,555,164 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000104881   ⟹   ENSRNOP00000086269
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl122,591,219 - 2,604,222 (+)Ensembl
RefSeq Acc Id: NM_001025425   ⟹   NP_001020596
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8127,389,267 - 7,398,377 (+)NCBI
mRatBN7.2122,591,424 - 2,600,534 (+)NCBI
Rnor_6.0122,548,218 - 2,555,164 (-)NCBI
Rnor_5.0124,698,912 - 4,708,078 (-)NCBI
RGSC_v3.4121,545,407 - 1,552,353 (-)RGD
Celera124,407,043 - 4,413,990 (+)RGD
Sequence:
RefSeq Acc Id: NM_001401207   ⟹   NP_001388136
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8127,389,267 - 7,398,377 (+)NCBI
mRatBN7.2122,591,424 - 2,600,534 (+)NCBI
RefSeq Acc Id: XM_006248769   ⟹   XP_006248831
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8127,389,032 - 7,398,377 (+)NCBI
mRatBN7.2122,591,312 - 2,600,534 (+)NCBI
Rnor_6.0122,546,278 - 2,555,310 (-)NCBI
Rnor_5.0124,698,912 - 4,708,078 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008768985   ⟹   XP_008767207
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8127,389,032 - 7,398,377 (+)NCBI
mRatBN7.2122,591,313 - 2,600,534 (+)NCBI
Rnor_6.0122,546,278 - 2,555,308 (-)NCBI
Sequence:
RefSeq Acc Id: NP_001020596   ⟸   NM_001025425
- Peptide Label: isoform 1
- UniProtKB: Q4KSH7 (UniProtKB/Swiss-Prot),   A6KQ65 (UniProtKB/TrEMBL),   A6KQ61 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006248831   ⟸   XM_006248769
- Peptide Label: isoform X1
- UniProtKB: A6KQ62 (UniProtKB/TrEMBL),   A6KQ61 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008767207   ⟸   XM_008768985
- Peptide Label: isoform X2
- UniProtKB: A0A8L2UMW0 (UniProtKB/TrEMBL),   A6KQ63 (UniProtKB/TrEMBL),   A6KQ61 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000072160   ⟸   ENSRNOT00000084460
Ensembl Acc Id: ENSRNOP00000058535   ⟸   ENSRNOT00000061821
Protein kinase

Name Modeler Protein Id AA Range Protein Structure
AF-Q4KSH7-F1-model_v2 AlphaFold Q4KSH7 1-419 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13698383
Promoter ID:EPDNEW_R8907
Type:initiation region
Name:Map2k7_1
Description:mitogen activated protein kinase kinase 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0122,555,234 - 2,555,294EPDNEW


1 to 35 of 35 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-20352 BioCyc
Ensembl Genes ENSRNOG00000001047 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000061821 ENTREZGENE
  ENSRNOT00000084460 ENTREZGENE
  ENSRNOT00000104881 ENTREZGENE
  ENSRNOT00000104881.1 UniProtKB/Swiss-Prot
Gene3D-CATH Phosphorylase Kinase, domain 1 UniProtKB/Swiss-Prot
  Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot
InterPro Dual_spec_MAPK_kinase UniProtKB/Swiss-Prot
  Kinase-like_dom_sf UniProtKB/Swiss-Prot
  Prot_kinase_dom UniProtKB/Swiss-Prot
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot
KEGG Report rno:363855 UniProtKB/Swiss-Prot
NCBI Gene 363855 ENTREZGENE
PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5 UniProtKB/Swiss-Prot
  PROTEIN KINASE DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot
Pfam Pkinase UniProtKB/Swiss-Prot
PharmGKB MAP2K7 RGD
PhenoGen Map2k7 PhenoGen
PROSITE PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000001047 RatGTEx
SMART S_TKc UniProtKB/Swiss-Prot
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot
UniProt A0A0G2K2A1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8L2UMW0 ENTREZGENE, UniProtKB/TrEMBL
  A6KQ61 ENTREZGENE, UniProtKB/TrEMBL
  A6KQ62 ENTREZGENE, UniProtKB/TrEMBL
  A6KQ63 ENTREZGENE, UniProtKB/TrEMBL
  A6KQ64 ENTREZGENE, UniProtKB/TrEMBL
  A6KQ65 ENTREZGENE, UniProtKB/TrEMBL
  A6KQ66_RAT UniProtKB/TrEMBL
  A6KQ67_RAT UniProtKB/TrEMBL
  D3XAM6 ENTREZGENE
  MP2K7_RAT UniProtKB/Swiss-Prot, ENTREZGENE
1 to 35 of 35 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-02-09 Map2k7  mitogen activated protein kinase kinase 7      Symbol and Name status set to provisional 70820 PROVISIONAL