Pik3cd (phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta) - Rat Genome Database

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Gene: Pik3cd (phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta) Rattus norvegicus
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Symbol: Pik3cd
Name: phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta
RGD ID: 1310990
Description: Predicted to enable 1-phosphatidylinositol-3-kinase activity and 1-phosphatidylinositol-4-phosphate 3-kinase activity. Involved in negative regulation of gene expression. Predicted to be located in cytosol. Predicted to be part of phosphatidylinositol 3-kinase complex, class IA. Predicted to be active in cytoplasm and plasma membrane. Used to study schizophrenia. Human ortholog(s) of this gene implicated in colorectal cancer; endometrial cancer; immunodeficiency 14; and schizophrenia. Orthologous to human PIK3CD (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; FasL mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: catalytic phosphatidylinositol 3-kinase delta; LOC366508; phosphatidylinositol 3-kinase catalytic delta polypeptide; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform; phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta isoform; phosphoinositide-3-kinase, catalytic, delta polypeptide
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85165,377,994 - 165,426,620 (-)NCBIGRCr8
mRatBN7.25160,094,952 - 160,142,962 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5160,094,952 - 160,120,930 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5162,811,574 - 162,837,548 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05164,630,975 - 164,656,844 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05164,587,341 - 164,613,203 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05166,602,053 - 166,628,028 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5166,602,053 - 166,628,028 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05170,248,202 - 170,274,177 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45166,735,274 - 166,761,189 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15166,747,134 - 166,774,251 (-)NCBI
Celera5158,364,393 - 158,390,431 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Object Symbol
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Original Reference(s)
Pik3cdRatCharcot-Marie-Tooth disease type 2  ISOPIK3CD (Homo sapiens)8554872ClinVar Annotator: match by term: Charcot-Marie-Tooth disease type 2ClinVarPMID:28492532
Pik3cdRatchromosome 1p36 deletion syndrome  ISOPIK3CD (Homo sapiens)8554872ClinVar Annotator: match by term: Chromosome 1p36 deletion syndromeClinVar 
Pik3cdRatgenetic disease  ISOPIK3CD (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:16984281 more ...
Pik3cdRatimmunodeficiency 14  ISOPIK3CD (Homo sapiens)8554872ClinVar more ...ClinVarPMID:16199547 more ...
Pik3cdRatNeurodevelopmental Disorders  ISOPIK3CD (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868
Pik3cdRatprimary immunodeficiency disease  ISOPIK3CD (Homo sapiens)8554872ClinVar Annotator: match by term: Inherited Immunodeficiency DiseasesClinVarPMID:16984281 more ...
Pik3cdRatRoifman-Chitayat Syndrome  ISOPIK3CD (Homo sapiens)8554872ClinVar more ...ClinVarPMID:16984281 more ...
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Original Reference(s)
Pik3cdRatdiffuse large B-cell lymphoma  ISOPIK3CD (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:21173233
Pik3cdRatmantle cell lymphoma  ISOPIK3CD (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:23676220
Pik3cdRatProstatic Neoplasms  ISOPIK3CD (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:17199135
Pik3cdRatRoifman-Chitayat Syndrome  ISOPIK3CD (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTD 
Object Symbol
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Original Reference(s)
Pik3cdRatimmunodeficiency 14  ISOPIK3CD (Homo sapiens)7240710 OMIM 
Pik3cdRatRoifman-Chitayat Syndrome  ISOPIK3CD (Homo sapiens)7240710 OMIM 

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Original Reference(s)
Pik3cdRat(-)-epigallocatechin 3-gallate multiple interactionsISOPIK3CD (Homo sapiens)6480464[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of PIK3CD mRNACTDPMID:22079256
Pik3cdRat1,2-dichloroethane decreases expressionISOPik3cd (Mus musculus)6480464ethylene dichloride results in decreased expression of PIK3CD mRNACTDPMID:28960355
Pik3cdRat17beta-estradiol multiple interactionsISOPIK3CD (Homo sapiens)6480464[Estradiol co-treated with TGFB1 protein] results in increased expression of PIK3CD mRNACTDPMID:30165855
Pik3cdRat17beta-estradiol multiple interactionsEXP 6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of PIK3CD mRNACTDPMID:32741896
Pik3cdRat17beta-estradiol 3-benzoate multiple interactionsEXP 6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of PIK3CD mRNACTDPMID:32741896
Pik3cdRat2,3',4,4',5-Pentachlorobiphenyl increases expressionISOPik3cd (Mus musculus)64804642 more ...CTDPMID:31388691
Pik3cdRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOPik3cd (Mus musculus)6480464Tetrachlorodibenzodioxin promotes the reaction [AHR protein binds to PIK3CD gene]CTDPMID:20819909
Pik3cdRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of PIK3CD mRNACTDPMID:33387578
Pik3cdRat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of PIK3CD mRNACTDPMID:34747641
Pik3cdRat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of PIK3CD mRNACTDPMID:32109520
Pik3cdRat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOPik3cd (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of PIK3CD mRNACTDPMID:20819909
Pik3cdRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOPik3cd (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased expression of PIK3CD mRNACTDPMID:19465110
Pik3cdRat2-butoxyethanol decreases expressionISOPik3cd (Mus musculus)6480464n-butoxyethanol results in decreased expression of PIK3CD mRNACTDPMID:19812364
Pik3cdRat3,3',5-triiodo-L-thyronine increases expressionISOPik3cd (Mus musculus)6480464Triiodothyronine results in increased expression of PIK3CD mRNACTDPMID:25172293
Pik3cdRat3-methylcholanthrene multiple interactionsISOPik3cd (Mus musculus)6480464[Methylcholanthrene co-treated with Tetradecanoylphorbol Acetate] results in increased expression of PIK3CD mRNACTDPMID:23519560
Pik3cdRat4,4'-diaminodiphenylmethane increases expressionISOPik3cd (Mus musculus)64804644 and 4'-diaminodiphenylmethane results in increased expression of PIK3CD mRNACTDPMID:18648102
Pik3cdRat4,4'-sulfonyldiphenol decreases methylationISOPik3cd (Mus musculus)6480464bisphenol S results in decreased methylation of PIK3CD exonCTDPMID:33297965
Pik3cdRat4,4'-sulfonyldiphenol increases methylationISOPIK3CD (Homo sapiens)6480464bisphenol S results in increased methylation of PIK3CD geneCTDPMID:31601247
Pik3cdRat4-hydroxynon-2-enal decreases expressionISOPik3cd (Mus musculus)64804644-hydroxy-2-nonenal results in decreased expression of PIK3CD mRNACTDPMID:19191707
Pik3cdRat4-nitrophenol increases expressionISOPik3cd (Mus musculus)64804644-nitrophenol results in increased expression of PIK3CD mRNACTDPMID:34673133

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Biological Process
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Original Reference(s)
Pik3cdRatB cell activation acts_upstream_of_or_withinISOPik3cd (Mus musculus)1624291MGI:2388047 PMID:12235209RGDPMID:12235209
Pik3cdRatB cell homeostasis acts_upstream_of_or_withinISOPik3cd (Mus musculus)1624291MGI:2388047 PMID:12235209RGDPMID:12235209
Pik3cdRatcell migration involved_inIBAFB:FBgn0015279 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Pik3cdRatcell surface receptor signaling pathway acts_upstream_of_or_withinISOPik3cd (Mus musculus)1624291MGI:2388047 PMID:12235209RGDPMID:12235209
Pik3cdRatdefense response to fungus acts_upstream_of_or_withinISOPik3cd (Mus musculus)1624291MGI:2385596 PMID:24009720RGDPMID:24009720
Pik3cdRathomeostasis of number of cells acts_upstream_of_or_withinISOPik3cd (Mus musculus)1624291MGI:2385596 PMID:24009720RGDPMID:24009720
Pik3cdRatnegative regulation of gene expression involved_inIGIUniProtKB:A0A0G2K34413524616PMID:28947594BHF-UCL 
Pik3cdRatphosphatidylinositol 3-kinase/protein kinase B signal transduction involved_inIBAFB:FBgn0015279 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Pik3cdRatphosphatidylinositol 3-kinase/protein kinase B signal transduction involved_inIEAUniProtKB:O00329 and ensembl:ENSP000003665631600115GO_REF:0000107EnsemblGO_REF:0000107
Pik3cdRatphosphatidylinositol 3-kinase/protein kinase B signal transduction involved_inIEAInterPro:IPR0377031600115GO_REF:0000002InterProGO_REF:0000002
Pik3cdRatphosphatidylinositol 3-kinase/protein kinase B signal transduction involved_inISOPik3cd (Mus musculus)1624291 PMID:31915155RGDPMID:31915155
Pik3cdRatphosphatidylinositol 3-kinase/protein kinase B signal transduction involved_inISOPIK3CD (Homo sapiens)1624291UniProtKB:P01133 more ...RGDPMID:25339672 and PMID:31915155
Pik3cdRatphosphatidylinositol phosphate biosynthetic process involved_inIEAInterPro:IPR0154331600115GO_REF:0000002InterProGO_REF:0000002
Pik3cdRatphosphatidylinositol-3-phosphate biosynthetic process involved_inIBAMGI:1203729 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Pik3cdRatphosphatidylinositol-mediated signaling involved_inIBAPANTHER:PTN000005673 and dictyBase:DDB_G02787271600115GO_REF:0000033GO_CentralGO_REF:0000033
Pik3cdRatpositive regulation of angiogenesis involved_inISOPik3cd (Mus musculus)1624291 PMID:31915155RGDPMID:31915155
Pik3cdRatpositive regulation of cell migration involved_inISOPIK3CD (Homo sapiens)1624291 PMID:22079609RGDPMID:22079609
Pik3cdRatpositive regulation of cell migration involved_inIEAUniProtKB:O00329 and ensembl:ENSP000003665631600115GO_REF:0000107EnsemblGO_REF:0000107
Pik3cdRatpositive regulation of endothelial cell migration involved_inISOPIK3CD (Homo sapiens)1624291UniProtKB:P01133 more ...RGDPMID:31915155
Pik3cdRatpositive regulation of endothelial cell migration involved_inIEAUniProtKB:O00329 and ensembl:ENSP000003665631600115GO_REF:0000107EnsemblGO_REF:0000107
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Cellular Component

  
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Original Reference(s)
Pik3cdRatcytoplasm is_active_inIBAFB:FBgn0004373 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Pik3cdRatcytosol located_inIEAARBA:ARBA000292431600115GO_REF:0000117UniProtGO_REF:0000117
Pik3cdRatcytosol located_inTAS 1600115Reactome:R-RNO-912619ReactomeReactome:R-RNO-912619
Pik3cdRatphosphatidylinositol 3-kinase complex part_ofIBAFB:FBgn0015279 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Pik3cdRatphosphatidylinositol 3-kinase complex, class IA part_ofISOPIK3CD (Homo sapiens)1624291 PMID:28108251RGDPMID:28108251
Pik3cdRatphosphatidylinositol 3-kinase complex, class IA part_ofIEAUniProtKB:O00329 and ensembl:ENSP000003665631600115GO_REF:0000107EnsemblGO_REF:0000107
Pik3cdRatplasma membrane is_active_inIBAPANTHER:PTN000005674 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033

Molecular Function
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Original Reference(s)
Pik3cdRat1-phosphatidylinositol-3-kinase activity enablesIBAFB:FBgn0015278 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Pik3cdRat1-phosphatidylinositol-3-kinase activity enablesIEAInterPro:IPR0377031600115GO_REF:0000002InterProGO_REF:0000002
Pik3cdRat1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity enablesIEAEC:2.7.1.1531600115GO_REF:0000003UniProtGO_REF:0000003
Pik3cdRat1-phosphatidylinositol-4-phosphate 3-kinase activity enablesIBAFB:FBgn0015278 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Pik3cdRatATP binding enablesIEAUniProtKB-KW:KW-00671600115GO_REF:0000043UniProtGO_REF:0000043
Pik3cdRatkinase activity enablesIEAInterPro:IPR0189361600115GO_REF:0000002InterProGO_REF:0000002
Pik3cdRatkinase activity enablesIEAUniProtKB-KW:KW-04181600115GO_REF:0000043UniProtGO_REF:0000043
Pik3cdRatphosphatidylinositol kinase activity enablesIEAARBA:ARBA000334941600115GO_REF:0000117UniProtGO_REF:0000117
Pik3cdRatprotein binding enablesISOPIK3CD (Homo sapiens)1624291UniProtKB:P27986 more ...RGDPMID:21827948 more ...
Pik3cdRatprotein binding enablesISOPik3cd (Mus musculus) and PR:O35904-21624291UniProtKB:P26450 and PMID:22020336RGDPMID:22020336
Pik3cdRatprotein binding enablesISOPIK3CD (Homo sapiens) and UniProtKB:O00329-21624291UniProtKB:P01112 and PMID:22020336RGDPMID:22020336
Pik3cdRattransferase activity enablesIEAUniProtKB-KW:KW-08081600115GO_REF:0000043UniProtGO_REF:0000043
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RGD Manual Annotations


  

Imported Annotations - SMPDB

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Pik3cdRatphosphoinositide metabolic pathway  ISOPIK3CD (Homo sapiens)10402751 SMPDBSMP:00463

Imported Annotations - KEGG (archival)

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Pik3cdRatacute myeloid leukemia pathway  IEA 6907045 KEGGrno:05221
Pik3cdRataldosterone signaling pathway   IEA 6907045 KEGGrno:04960
Pik3cdRatapoptotic cell death pathway  IEA 6907045 KEGGrno:04210
Pik3cdRatB cell receptor signaling pathway  IEA 6907045 KEGGrno:04662
Pik3cdRatceramide signaling pathway  IEA 6907045 KEGGrno:05212
Pik3cdRatChagas disease pathway  IEA 6907045 KEGGrno:05142
Pik3cdRatchemokine mediated signaling pathway  IEA 6907045 KEGGrno:04062
Pik3cdRatchronic myeloid leukemia pathway  IEA 6907045 KEGGrno:05220
Pik3cdRatcolorectal cancer pathway   IEA 6907045 KEGGrno:05210
Pik3cdRatendometrial cancer pathway   IEA 6907045 KEGGrno:05213
Pik3cdRatEntamoebiasis pathway  IEA 6907045 KEGGrno:05146
Pik3cdRatepidermal growth factor/neuregulin signaling pathway   IEA 6907045 KEGGrno:04012
Pik3cdRatFc epsilon receptor mediated signaling pathway  IEA 6907045 KEGGrno:04664
Pik3cdRatFc gamma receptor mediated signaling pathway  IEA 6907045 KEGGrno:04666
Pik3cdRatglioma pathway  IEA 6907045 KEGGrno:05214
Pik3cdRathepatitis C pathway  IEA 6907045 KEGGrno:05160
Pik3cdRatinfluenza A pathway  IEA 6907045 KEGGrno:05164
Pik3cdRatinositol phosphate metabolic pathway  IEA 6907045 KEGGrno:00562
Pik3cdRatinsulin signaling pathway   IEA 6907045 KEGGrno:04910
Pik3cdRatJak-Stat signaling pathway   IEA 6907045 KEGGrno:04630
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Imported Annotations - PID (archival)


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#
Reference Title
Reference Citation
1. MiR-339 inhibits proliferation of pulmonary artery smooth muscle cell by targeting FGF signaling. Chen J, etal., Physiol Rep. 2017 Sep;5(18). pii: 5/18/e13441. doi: 10.14814/phy2.13441.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
4. Phosphoinositide 3-kinases as a common platform for multi-hormone signaling. Hirsch E, etal., J Endocrinol. 2007 Aug;194(2):243-56.
5. Pharmacological inhibition of p110δ subunit of PI3K confers protection against experimental leishmaniasis. Khadem F, etal., J Antimicrob Chemother. 2017 Feb;72(2):467-477. doi: 10.1093/jac/dkw448. Epub 2016 Dec 20.
6. Neuregulin 1-ErbB4-PI3K signaling in schizophrenia and phosphoinositide 3-kinase-p110δ inhibition as a potential therapeutic strategy. Law AJ, etal., Proc Natl Acad Sci U S A. 2012 Jul 24;109(30):12165-70. doi: 10.1073/pnas.1206118109. Epub 2012 Jun 11.
7. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
8. Deficiency of Phosphatidylinositol 3-Kinase δ Signaling Leads to Diminished Numbers of Regulatory T Cells and Increased Neutrophil Activity Resulting in Mortality Due to Endotoxic Shock. Okeke EB, etal., J Immunol. 2017 Aug 1;199(3):1086-1095. doi: 10.4049/jimmunol.1600954. Epub 2017 Jun 28.
9. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
10. PI3Kδ Regulates the Magnitude of CD8+ T Cell Responses after Challenge with Listeria monocytogenes. Pearce VQ, etal., J Immunol. 2015 Oct 1;195(7):3206-17. doi: 10.4049/jimmunol.1501227. Epub 2015 Aug 26.
11. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
12. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
13. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
14. The p110δ isoforme of phosphatidylinositol 3-kinase plays an important role in host defense against chlamydial lung infection through influencing CD4+ T-cell function. Qiao S, etal., Pathog Dis. 2018 Aug 1;76(6). pii: 5035814. doi: 10.1093/femspd/fty053.
15. Role of PI3Kdelta and PI3Kgamma in inflammatory arthritis and tissue localization of neutrophils. Randis TM, etal., Eur J Immunol. 2008 May;38(5):1215-24.
16. GOA pipeline RGD automated data pipeline
17. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
18. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
19. Primate-specific miR-663 functions as a tumor suppressor by targeting PIK3CD and predicts the prognosis of human glioblastoma. Shi Y, etal., Clin Cancer Res. 2014 Apr 1;20(7):1803-13. doi: 10.1158/1078-0432.CCR-13-2284. Epub 2014 Feb 12.
20. PI3Kδ hyper-activation promotes development of B cells that exacerbate Streptococcus pneumoniae infection in an antibody-independent manner. Stark AK, etal., Nat Commun. 2018 Aug 9;9(1):3174. doi: 10.1038/s41467-018-05674-8.
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PMID:12235209   PMID:12477932   PMID:22079609   PMID:22391142   PMID:24009720   PMID:25327288   PMID:25339672   PMID:35130772   PMID:37277581  



Pik3cd
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85165,377,994 - 165,426,620 (-)NCBIGRCr8
mRatBN7.25160,094,952 - 160,142,962 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5160,094,952 - 160,120,930 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5162,811,574 - 162,837,548 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05164,630,975 - 164,656,844 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05164,587,341 - 164,613,203 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05166,602,053 - 166,628,028 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5166,602,053 - 166,628,028 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05170,248,202 - 170,274,177 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45166,735,274 - 166,761,189 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15166,747,134 - 166,774,251 (-)NCBI
Celera5158,364,393 - 158,390,431 (-)NCBICelera
Cytogenetic Map5q36NCBI
PIK3CD
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3819,627,258 - 9,729,114 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl19,629,889 - 9,729,114 (+)EnsemblGRCh38hg38GRCh38
GRCh3719,711,789 - 9,789,172 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3619,634,377 - 9,711,759 (+)NCBINCBI36Build 36hg18NCBI36
Build 3419,646,068 - 9,723,240NCBI
Celera18,862,699 - 8,900,443 (+)NCBICelera
Cytogenetic Map1p36.22NCBI
HuRef18,867,937 - 8,945,277 (+)NCBIHuRef
CHM1_119,700,330 - 9,777,708 (+)NCBICHM1_1
T2T-CHM13v2.019,170,040 - 9,271,897 (+)NCBIT2T-CHM13v2.0
Pik3cd
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394149,733,625 - 149,787,023 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4149,733,625 - 149,787,028 (-)EnsemblGRCm39 Ensembl
GRCm384149,649,168 - 149,702,566 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4149,649,168 - 149,702,571 (-)EnsemblGRCm38mm10GRCm38
MGSCv374149,023,277 - 149,075,738 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364148,492,968 - 148,542,489 (-)NCBIMGSCv36mm8
Celera4151,915,787 - 151,968,568 (-)NCBICelera
Cytogenetic Map4E2NCBI
cM Map480.15NCBI
Pik3cd
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554863,813,923 - 3,838,119 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554863,813,923 - 3,837,563 (-)NCBIChiLan1.0ChiLan1.0
PIK3CD
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21218,491,653 - 218,569,742 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11217,137,299 - 217,214,394 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v018,418,570 - 8,495,435 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.119,683,626 - 9,724,641 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl19,686,208 - 9,724,633 (+)Ensemblpanpan1.1panPan2
PIK3CD
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1562,884,596 - 62,936,882 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl562,909,009 - 62,935,971 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha562,900,181 - 62,953,014 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0563,111,143 - 63,163,978 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl563,093,394 - 63,164,766 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1563,132,926 - 63,185,725 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0562,972,335 - 63,025,149 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0563,376,064 - 63,428,899 (+)NCBIUU_Cfam_GSD_1.0
Pik3cd
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505833,167,388 - 33,211,355 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366233,672,201 - 3,696,959 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PIK3CD
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl670,026,373 - 70,084,742 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1670,026,254 - 70,086,950 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2664,031,598 - 64,091,037 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PIK3CD
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120122,040,131 - 122,111,397 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20122,041,963 - 122,078,504 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605426,005,112 - 26,077,450 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pik3cd
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248182,751,724 - 2,779,999 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248182,751,724 - 2,789,145 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

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Variants in Pik3cd
192 total Variants

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
Mir384rno-miR-384-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR//Western blotFunctional MTI23315007

Predicted Target Of
Summary Value
Count of predictions:387
Count of miRNA genes:230
Interacting mature miRNAs:270
Transcripts:ENSRNOT00000066179
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 24 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5124965598166875058Rat
631272Lanf1Left ventricular atrial natriuretic factor QTL 112heart left ventricle natriuretic peptide A amount (VT:0010596)heart left ventricle natriuretic peptide A level (CMO:0002165)5151113452166875058Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
2302369Scl60Serum cholesterol level QTL 603.13blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)5143608201161165651Rat
631562Apr2Acute phase response QTL 23.7blood murinoglobulin 1 amount (VT:0010597)plasma murinoglobulin 1 level (CMO:0001931)5135927956166875058Rat
634349Bp139Blood pressure QTL 1390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5128924607166875058Rat
61444Strs2Sensitivity to stroke QTL 24.7cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)5135929696166875058Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5126424772166875058Rat
1549904Neuinf1Neuroinflammation QTL 130nervous system integrity trait (VT:0010566)blood T lymphocyte count (CMO:0000110)5154828214166875058Rat
738018Anxrr4Anxiety related response QTL 45.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)5130130159166875058Rat

1 to 10 of 24 rows
RH133425  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25160,095,082 - 160,095,287 (+)MAPPERmRatBN7.2
Rnor_6.05166,602,184 - 166,602,388NCBIRnor6.0
Rnor_5.05170,248,333 - 170,248,537UniSTSRnor5.0
RGSC_v3.45166,735,405 - 166,735,609UniSTSRGSC3.4
Celera5158,364,524 - 158,364,728UniSTS
RH 3.4 Map51115.8UniSTS
Cytogenetic Map5q36UniSTS
RH142729  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25160,112,028 - 160,112,136 (+)MAPPERmRatBN7.2
Rnor_6.05166,619,130 - 166,619,237NCBIRnor6.0
Rnor_5.05170,265,279 - 170,265,386UniSTSRnor5.0
RGSC_v3.45166,752,291 - 166,752,398UniSTSRGSC3.4
Celera5158,381,533 - 158,381,640UniSTS
RH 3.4 Map51115.5UniSTS
Cytogenetic Map5q36UniSTS
BE109926  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25160,097,539 - 160,097,715 (+)MAPPERmRatBN7.2
Rnor_6.05166,604,641 - 166,604,816NCBIRnor6.0
Rnor_5.05170,250,790 - 170,250,965UniSTSRnor5.0
RGSC_v3.45166,737,862 - 166,738,037UniSTSRGSC3.4
Celera5158,366,981 - 158,367,156UniSTS
RH 3.4 Map51114.6UniSTS
Cytogenetic Map5q36UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31


1 to 28 of 28 rows
RefSeq Transcripts NM_001108978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039110494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039110495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039110496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039110497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039110498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039110499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039110500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039110501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039110502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039110503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039110504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039110505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063288133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063288134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063288135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063288136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063288137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063288138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063288139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063288140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063288141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063288142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC099153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ225708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ231411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 28 of 28 rows

Ensembl Acc Id: ENSRNOT00000066179   ⟹   ENSRNOP00000061674
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5160,094,952 - 160,120,930 (-)Ensembl
Rnor_6.0 Ensembl5166,602,053 - 166,628,028 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000095643   ⟹   ENSRNOP00000076811
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5160,095,016 - 160,120,930 (-)Ensembl
RefSeq Acc Id: NM_001108978   ⟹   NP_001102448
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,377,994 - 165,403,968 (-)NCBI
mRatBN7.25160,094,952 - 160,120,930 (-)NCBI
Rnor_6.05166,602,053 - 166,628,028 (-)NCBI
Rnor_5.05170,248,202 - 170,274,177 (-)NCBI
RGSC_v3.45166,735,274 - 166,761,189 (-)RGD
Celera5158,364,393 - 158,390,431 (-)RGD
Sequence:
RefSeq Acc Id: XM_039110494   ⟹   XP_038966422
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,426,620 (-)NCBI
mRatBN7.25160,095,015 - 160,142,961 (-)NCBI
RefSeq Acc Id: XM_039110495   ⟹   XP_038966423
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,426,620 (-)NCBI
mRatBN7.25160,095,015 - 160,142,962 (-)NCBI
RefSeq Acc Id: XM_039110496   ⟹   XP_038966424
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,425,942 (-)NCBI
mRatBN7.25160,095,015 - 160,126,805 (-)NCBI
RefSeq Acc Id: XM_039110497   ⟹   XP_038966425
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,406,179 (-)NCBI
mRatBN7.25160,095,015 - 160,123,156 (-)NCBI
RefSeq Acc Id: XM_039110498   ⟹   XP_038966426
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,425,870 (-)NCBI
mRatBN7.25160,095,015 - 160,142,835 (-)NCBI
RefSeq Acc Id: XM_039110499   ⟹   XP_038966427
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,426,620 (-)NCBI
mRatBN7.25160,095,015 - 160,142,961 (-)NCBI
RefSeq Acc Id: XM_039110500   ⟹   XP_038966428
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,426,620 (-)NCBI
mRatBN7.25160,095,015 - 160,142,961 (-)NCBI
RefSeq Acc Id: XM_039110501   ⟹   XP_038966429
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,426,620 (-)NCBI
mRatBN7.25160,095,015 - 160,142,961 (-)NCBI
RefSeq Acc Id: XM_039110502   ⟹   XP_038966430
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,426,620 (-)NCBI
mRatBN7.25160,095,015 - 160,142,961 (-)NCBI
RefSeq Acc Id: XM_039110503   ⟹   XP_038966431
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,426,620 (-)NCBI
mRatBN7.25160,095,015 - 160,142,961 (-)NCBI
RefSeq Acc Id: XM_039110504   ⟹   XP_038966432
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,426,620 (-)NCBI
mRatBN7.25160,095,015 - 160,142,961 (-)NCBI
RefSeq Acc Id: XM_039110505   ⟹   XP_038966433
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,426,620 (-)NCBI
mRatBN7.25160,095,015 - 160,142,961 (-)NCBI
RefSeq Acc Id: XM_063288133   ⟹   XP_063144203
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,426,620 (-)NCBI
RefSeq Acc Id: XM_063288134   ⟹   XP_063144204
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,406,174 (-)NCBI
RefSeq Acc Id: XM_063288135   ⟹   XP_063144205
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,405,561 (-)NCBI
RefSeq Acc Id: XM_063288136   ⟹   XP_063144206
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,425,933 (-)NCBI
RefSeq Acc Id: XM_063288137   ⟹   XP_063144207
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,426,620 (-)NCBI
RefSeq Acc Id: XM_063288138   ⟹   XP_063144208
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,425,990 (-)NCBI
RefSeq Acc Id: XM_063288139   ⟹   XP_063144209
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,406,167 (-)NCBI
RefSeq Acc Id: XM_063288140   ⟹   XP_063144210
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,425,917 (-)NCBI
RefSeq Acc Id: XM_063288141   ⟹   XP_063144211
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,426,620 (-)NCBI
RefSeq Acc Id: XM_063288142   ⟹   XP_063144212
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85165,378,057 - 165,406,177 (-)NCBI
1 to 28 of 28 rows
Protein RefSeqs NP_001102448 (Get FASTA)   NCBI Sequence Viewer  
  XP_038966422 (Get FASTA)   NCBI Sequence Viewer  
  XP_038966423 (Get FASTA)   NCBI Sequence Viewer  
  XP_038966424 (Get FASTA)   NCBI Sequence Viewer  
  XP_038966425 (Get FASTA)   NCBI Sequence Viewer  
  XP_038966426 (Get FASTA)   NCBI Sequence Viewer  
  XP_038966427 (Get FASTA)   NCBI Sequence Viewer  
  XP_038966428 (Get FASTA)   NCBI Sequence Viewer  
  XP_038966429 (Get FASTA)   NCBI Sequence Viewer  
  XP_038966430 (Get FASTA)   NCBI Sequence Viewer  
  XP_038966431 (Get FASTA)   NCBI Sequence Viewer  
  XP_038966432 (Get FASTA)   NCBI Sequence Viewer  
  XP_038966433 (Get FASTA)   NCBI Sequence Viewer  
  XP_063144203 (Get FASTA)   NCBI Sequence Viewer  
  XP_063144204 (Get FASTA)   NCBI Sequence Viewer  
  XP_063144205 (Get FASTA)   NCBI Sequence Viewer  
  XP_063144206 (Get FASTA)   NCBI Sequence Viewer  
  XP_063144207 (Get FASTA)   NCBI Sequence Viewer  
  XP_063144208 (Get FASTA)   NCBI Sequence Viewer  
  XP_063144209 (Get FASTA)   NCBI Sequence Viewer  
  XP_063144210 (Get FASTA)   NCBI Sequence Viewer  
  XP_063144211 (Get FASTA)   NCBI Sequence Viewer  
  XP_063144212 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL81170 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000061674
  ENSRNOP00000061674.2
  ENSRNOP00000076811
  ENSRNOP00000076811.1
1 to 28 of 28 rows
1 to 5 of 25 rows
1 to 5 of 25 rows
RefSeq Acc Id: NP_001102448   ⟸   NM_001108978
- UniProtKB: D4A5Q1 (UniProtKB/TrEMBL),   A6IUB9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000061674   ⟸   ENSRNOT00000066179
RefSeq Acc Id: XP_038966423   ⟸   XM_039110495
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038966433   ⟸   XM_039110505
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038966432   ⟸   XM_039110504
- Peptide Label: isoform X7
Name Modeler Protein Id AA Range Protein Structure
AF-D4A5Q1-F1-model_v2 AlphaFold D4A5Q1 1-944 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 40 of 57 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-39122 BioCyc
BioCyc Pathway PWY-6352 [3-phosphoinositide biosynthesis] BioCyc
BioCyc Pathway Image PWY-6352 BioCyc
Ensembl Genes ENSRNOG00000016846 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000066179 ENTREZGENE
  ENSRNOT00000066179.3 UniProtKB/TrEMBL
  ENSRNOT00000095643 ENTREZGENE
  ENSRNOT00000095643.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1070.11 UniProtKB/TrEMBL
  1.25.40.70 UniProtKB/TrEMBL
  2.60.40.150 UniProtKB/TrEMBL
  3.10.20.770 UniProtKB/TrEMBL
  Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 4 UniProtKB/TrEMBL
InterPro ARM-type_fold UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/TrEMBL
  Kinase-like_dom UniProtKB/TrEMBL
  PI3/4_kinase_cat_dom UniProtKB/TrEMBL
  PI3/4_kinase_cat_sf UniProtKB/TrEMBL
  PI3/4_kinase_CS UniProtKB/TrEMBL
  PI3K_accessory_sf UniProtKB/TrEMBL
  PI3K_C2_dom UniProtKB/TrEMBL
  PI3K_p85-bd UniProtKB/TrEMBL
  PI3K_Ras-bd_dom UniProtKB/TrEMBL
  PI3Kdelta_dom UniProtKB/TrEMBL
  PI_Kinase UniProtKB/TrEMBL
  PInositide-3_kin_accessory_dom UniProtKB/TrEMBL
  Ubiquitin-rel_dom UniProtKB/TrEMBL
KEGG Report rno:366508 UniProtKB/TrEMBL
NCBI Gene 366508 ENTREZGENE
PANTHER PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE 3-KINASE CATALYTIC SUBUNIT DELTA ISOFORM UniProtKB/TrEMBL
  PI_Kinase UniProtKB/TrEMBL
Pfam PI3_PI4_kinase UniProtKB/TrEMBL
  PI3K_C2 UniProtKB/TrEMBL
  PI3K_p85B UniProtKB/TrEMBL
  PI3K_rbd UniProtKB/TrEMBL
  PI3Ka UniProtKB/TrEMBL
PhenoGen Pik3cd PhenoGen
PROSITE PI3_4_KINASE_1 UniProtKB/TrEMBL
  PI3_4_KINASE_2 UniProtKB/TrEMBL
  PI3_4_KINASE_3 UniProtKB/TrEMBL
1 to 40 of 57 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-10-10 Pik3cd  phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta  Pik3cd  phosphoinositide-3-kinase, catalytic, delta polypeptide  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-04-23 Pik3cd  phosphoinositide-3-kinase, catalytic, delta polypeptide  Pik3cd  phosphatidylinositol 3-kinase catalytic delta polypeptide  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Pik3cd  phosphatidylinositol 3-kinase catalytic delta polypeptide   Pik3cd_predicted  phosphatidylinositol 3-kinase catalytic delta polypeptide (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Pik3cd_predicted  phosphatidylinositol 3-kinase catalytic delta polypeptide (predicted)      Symbol and Name status set to approved 70820 APPROVED