Mindy3 (MINDY lysine 48 deubiquitinase 3) - Rat Genome Database

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Gene: Mindy3 (MINDY lysine 48 deubiquitinase 3) Rattus norvegicus
Analyze
Symbol: Mindy3
Name: MINDY lysine 48 deubiquitinase 3
RGD ID: 1309605
Description: Predicted to enable K48-linked deubiquitinase activity and cysteine-type deubiquitinase activity. Predicted to be involved in proteolysis. Predicted to be located in nuclear membrane and nucleoplasm. Orthologous to human MINDY3 (MINDY lysine 48 deubiquitinase 3); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-diaminodiphenylmethane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Fam188a; family with sequence similarity 188, member A; LOC291320; RGD1309605; similar to RIKEN cDNA 2310047O13 ; ubiquitin carboxyl-terminal hydrolase MINDY-3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81780,454,404 - 80,532,999 (-)NCBIGRCr8
mRatBN7.21775,545,286 - 75,623,884 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1775,545,286 - 75,623,854 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1779,004,991 - 79,083,646 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01782,840,328 - 82,918,988 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01776,888,261 - 76,966,923 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01779,720,534 - 79,798,470 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1779,720,535 - 79,798,435 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01781,348,947 - 81,426,343 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41786,693,496 - 86,771,915 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11786,713,857 - 86,956,893 (-)NCBI
Celera1774,921,510 - 74,998,724 (-)NCBICelera
Cytogenetic Map17q12.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
proteolysis  (IEA)

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:27292798  


Genomics

Comparative Map Data
Mindy3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81780,454,404 - 80,532,999 (-)NCBIGRCr8
mRatBN7.21775,545,286 - 75,623,884 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1775,545,286 - 75,623,854 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1779,004,991 - 79,083,646 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01782,840,328 - 82,918,988 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01776,888,261 - 76,966,923 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01779,720,534 - 79,798,470 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1779,720,535 - 79,798,435 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01781,348,947 - 81,426,343 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41786,693,496 - 86,771,915 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11786,713,857 - 86,956,893 (-)NCBI
Celera1774,921,510 - 74,998,724 (-)NCBICelera
Cytogenetic Map17q12.3NCBI
MINDY3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381015,778,174 - 15,860,507 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1015,778,170 - 15,860,507 (-)EnsemblGRCh38hg38GRCh38
GRCh371015,820,173 - 15,902,506 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361015,860,181 - 15,942,525 (-)NCBINCBI36Build 36hg18NCBI36
Build 341015,860,180 - 15,942,525NCBI
Celera1015,753,418 - 15,835,764 (-)NCBICelera
Cytogenetic Map10p13NCBI
HuRef1015,732,561 - 15,814,922 (-)NCBIHuRef
CHM1_11015,820,225 - 15,902,566 (-)NCBICHM1_1
T2T-CHM13v2.01015,796,178 - 15,878,518 (-)NCBIT2T-CHM13v2.0
Mindy3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39212,352,074 - 12,424,298 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl212,352,074 - 12,424,281 (-)EnsemblGRCm39 Ensembl
GRCm38212,347,263 - 12,419,489 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl212,347,263 - 12,419,470 (-)EnsemblGRCm38mm10GRCm38
MGSCv37212,268,891 - 12,341,087 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36212,265,117 - 12,337,313 (-)NCBIMGSCv36mm8
Celera212,260,745 - 12,332,603 (-)NCBICelera
Cytogenetic Map2A1NCBI
cM Map29.27NCBI
Mindy3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542911,805,080 - 11,890,103 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542911,805,205 - 11,890,103 (+)NCBIChiLan1.0ChiLan1.0
MINDY3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2828,627,068 - 28,709,225 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11028,632,395 - 28,714,551 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01016,101,605 - 16,183,746 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11016,377,064 - 16,459,134 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1016,377,064 - 16,459,135 (-)Ensemblpanpan1.1panPan2
MINDY3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1220,948,946 - 21,014,938 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl220,865,946 - 21,014,429 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha218,041,164 - 18,125,213 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0221,223,797 - 21,307,880 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl221,223,812 - 21,307,880 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1218,430,539 - 18,514,602 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0219,264,996 - 19,349,027 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0219,890,285 - 19,974,351 (+)NCBIUU_Cfam_GSD_1.0
Mindy3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934416,705,922 - 16,796,909 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365746,205,442 - 6,296,345 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365746,205,419 - 6,296,385 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MINDY3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1045,980,111 - 46,062,700 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11045,980,088 - 46,062,700 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21050,676,092 - 50,758,110 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MINDY3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1915,738,104 - 15,820,935 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl915,737,625 - 15,820,266 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605121,328,221 - 21,410,447 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mindy3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479611,778,201 - 11,863,318 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479611,778,932 - 11,862,882 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mindy3
549 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:270
Count of miRNA genes:180
Interacting mature miRNAs:207
Transcripts:ENSRNOT00000022986
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724549Niddm56Non-insulin dependent diabetes mellitus QTL 560.03blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)173199078476990784Rat
1354663Bvd5Brain ventricular dilatation QTL 53.510.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)173199078481292925Rat
2301412Kidm40Kidney mass QTL 400.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)173747984782479847Rat
2317054Aia12Adjuvant induced arthritis QTL 124.24joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)173828150983281509Rat
2317060Aia26Adjuvant induced arthritis QTL 263.22joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)173828150983281509Rat
1598871Memor5Memory QTL 55.3exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)174054004180387013Rat
1358295Aocep1Aortic cell protein QTL 16.10.00000071thoracic aorta cellular protein amount (VT:0010598)aortic cell percentage174099000585990005Rat
7411575Bw140Body weight QTL 14030.20.001body mass (VT:0001259)body weight gain (CMO:0000420)174856093586533673Rat
8694181Bw151Body weight QTL 1514.360.001body mass (VT:0001259)body weight gain (CMO:0000420)174856093586533673Rat
2317038Ginf3Gastrointestinal inflammation QTL 32.890.005liver integrity trait (VT:0010547)liver granuloma severity score (CMO:0002157)174992015486533673Rat
2303580Gluco49Glucose level QTL 492blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)175004027186533673Rat
4889894Eae33Experimental allergic encephalomyelitis QTL 335.20.0001nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)175090909986022412Rat
1354588Bvd4Brain ventricular dilatation QTL 45.310.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)175349882882479847Rat
2302365Gluco40Glucose level QTL 404.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)175724684382046127Rat
7488963Bp369Blood pressure QTL 3690.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)175900564977910000Rat
2317045Aia11Adjuvant induced arthritis QTL 114.06joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)176078142686533673Rat
7411577Bw141Body weight QTL 1410.001body mass (VT:0001259)body weight gain (CMO:0000420)176261951686533673Rat
631502Cm26Cardiac mass QTL 263.71heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)176570358081153923Rat
1300129Rf25Renal function QTL 253.03blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)177100332581153923Rat
12904736Cm121Cardiac mass QTL 1210.043heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)177177462182479847Rat

Markers in Region
RH129970  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21775,545,368 - 75,545,550 (+)MAPPERmRatBN7.2
Rnor_6.01779,720,617 - 79,720,798NCBIRnor6.0
Rnor_5.01781,349,030 - 81,349,211UniSTSRnor5.0
RGSC_v3.41786,693,578 - 86,693,759UniSTSRGSC3.4
Celera1774,921,592 - 74,921,773UniSTS
RH 3.4 Map17766.0UniSTS
Cytogenetic Map17q12.3UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 28 56 41 19 41 74 35 41 11
Low 15 1 8 11 8
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001106122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039095545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039095549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063276246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063276247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063276248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010058840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010058841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010058842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH473990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000022986   ⟹   ENSRNOP00000022986
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1775,545,286 - 75,623,854 (-)Ensembl
Rnor_6.0 Ensembl1779,720,535 - 79,798,435 (-)Ensembl
RefSeq Acc Id: NM_001106122   ⟹   NP_001099592
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81780,454,405 - 80,532,960 (-)NCBI
mRatBN7.21775,545,287 - 75,623,846 (-)NCBI
Rnor_6.01779,720,535 - 79,798,435 (-)NCBI
Rnor_5.01781,348,947 - 81,426,343 (-)NCBI
RGSC_v3.41786,693,496 - 86,771,915 (-)RGD
Celera1774,921,510 - 74,998,724 (-)RGD
Sequence:
RefSeq Acc Id: XM_017600495   ⟹   XP_017455984
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81780,454,404 - 80,532,997 (-)NCBI
mRatBN7.21775,545,286 - 75,623,883 (-)NCBI
Rnor_6.01779,720,534 - 79,798,470 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017600496   ⟹   XP_017455985
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81780,454,404 - 80,532,997 (-)NCBI
mRatBN7.21775,545,286 - 75,623,883 (-)NCBI
Rnor_6.01779,720,534 - 79,798,469 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039095545   ⟹   XP_038951473
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81780,454,404 - 80,518,353 (-)NCBI
mRatBN7.21775,545,286 - 75,609,235 (-)NCBI
RefSeq Acc Id: XM_039095549   ⟹   XP_038951477
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81780,454,404 - 80,532,996 (-)NCBI
mRatBN7.21775,545,286 - 75,623,882 (-)NCBI
RefSeq Acc Id: XM_063276246   ⟹   XP_063132316
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81780,454,404 - 80,532,998 (-)NCBI
RefSeq Acc Id: XM_063276247   ⟹   XP_063132317
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81780,454,404 - 80,532,997 (-)NCBI
RefSeq Acc Id: XM_063276248   ⟹   XP_063132318
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81780,454,404 - 80,524,009 (-)NCBI
RefSeq Acc Id: XR_010058840
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81780,455,258 - 80,532,999 (-)NCBI
RefSeq Acc Id: XR_010058841
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81780,455,258 - 80,532,997 (-)NCBI
RefSeq Acc Id: XR_010058842
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81780,464,148 - 80,532,999 (-)NCBI
RefSeq Acc Id: NP_001099592   ⟸   NM_001106122
- UniProtKB: D3Z916 (UniProtKB/TrEMBL),   A6JM32 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017455984   ⟸   XM_017600495
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017455985   ⟸   XM_017600496
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: ENSRNOP00000022986   ⟸   ENSRNOT00000022986
RefSeq Acc Id: XP_038951477   ⟸   XM_039095549
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038951473   ⟸   XM_039095545
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063132316   ⟸   XM_063276246
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063132317   ⟸   XM_063276247
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063132318   ⟸   XM_063276248
- Peptide Label: isoform X6
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3Z916-F1-model_v2 AlphaFold D3Z916 1-444 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700590
Promoter ID:EPDNEW_R11114
Type:initiation region
Name:Fam188a_1
Description:family with sequence similarity 188, member A
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01779,798,407 - 79,798,467EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309605 AgrOrtholog
BioCyc Gene G2FUF-8626 BioCyc
Ensembl Genes ENSRNOG00000016955 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000022986 ENTREZGENE
  ENSRNOT00000022986.6 UniProtKB/TrEMBL
Gene3D-CATH EF-hand UniProtKB/TrEMBL
InterPro DUF4205 UniProtKB/TrEMBL
  EF-hand-like_dom UniProtKB/TrEMBL
  MINY3/4 UniProtKB/TrEMBL
KEGG Report rno:291320 UniProtKB/TrEMBL
NCBI Gene 291320 ENTREZGENE
PANTHER PTHR12473 UniProtKB/TrEMBL
  UBIQUITIN CARBOXYL-TERMINAL HYDROLASE MINDY-3 UniProtKB/TrEMBL
Pfam DUF4205 UniProtKB/TrEMBL
PhenoGen Mindy3 PhenoGen
RatGTEx ENSRNOG00000016955 RatGTEx
SMART DUF4205 UniProtKB/TrEMBL
Superfamily-SCOP SSF47473 UniProtKB/TrEMBL
UniProt A6JM32 ENTREZGENE, UniProtKB/TrEMBL
  D3Z916 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-02-12 Mindy3  MINDY lysine 48 deubiquitinase 3  Fam188a  family with sequence similarity 188, member A  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-02-12 Fam188a  family with sequence similarity 188, member A  RGD1309605  similar to RIKEN cDNA 2310047O13   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1309605  similar to RIKEN cDNA 2310047O13   RGD1309605_predicted  similar to RIKEN cDNA 2310047O13 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-20 RGD1309605_predicted  similar to RIKEN cDNA 2310047O13 (predicted)  LOC291320_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC291320_predicted  similar to RIKEN cDNA 2310047O13 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL