Map2k4 (mitogen activated protein kinase kinase 4) - Rat Genome Database

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Gene: Map2k4 (mitogen activated protein kinase kinase 4) Rattus norvegicus
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Symbol: Map2k4
Name: mitogen activated protein kinase kinase 4
RGD ID: 1307040
Description: Enables JUN kinase kinase activity. Involved in several processes, including cellular response to sorbitol; positive regulation of JNK cascade; and positive regulation of macromolecule metabolic process. Located in axon; dendrite cytoplasm; and perikaryon. Used to study transient cerebral ischemia. Human ortholog(s) of this gene implicated in colorectal cancer; ovarian serous carcinoma; pancreatic cancer; respiratory system cancer (multiple); and urinary bladder cancer. Orthologous to human MAP2K4 (mitogen-activated protein kinase kinase 4); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ceramide signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acetamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: dual specificity mitogen-activated protein kinase kinase 4; LOC287398; MAP2K4delta; MKK4; SAPK/ERK kinase 1; Sek1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81050,842,348 - 50,947,063 (-)NCBIGRCr8
mRatBN7.21050,343,227 - 50,447,956 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1050,344,915 - 50,447,993 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1055,014,269 - 55,116,147 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01054,504,259 - 54,606,140 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01050,012,148 - 50,114,010 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01052,196,121 - 52,301,887 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1052,196,124 - 52,290,657 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01051,951,707 - 52,054,098 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41052,009,149 - 52,041,599 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11052,020,408 - 52,055,249 (-)NCBI
Celera1049,553,065 - 49,624,419 (-)NCBICelera
Cytogenetic Map10q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Object Symbol
Species
Term
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Source
Original Reference(s)
Map2k4RatBrain Death  IDA 7495829 RGD 
Map2k4RatBreast Neoplasms susceptibilityISOMAP2K4 (Homo sapiens)7495825DNA:SNP and haplotypeRGD 
Map2k4RatCardiac Arrhythmias  ISOMap2k4 (Mus musculus)7495828 RGD 
Map2k4Ratchronic obstructive pulmonary disease severityISOMAP2K4 (Homo sapiens)5490968 RGD 
Map2k4Ratcolorectal adenoma  ISOMAP2K4 (Homo sapiens)9068941protein:decreased expression:colorectum (human)RGDPMID:28423721 and REF_RGD_ID:150429743
Map2k4Ratcolorectal cancer amelioratesISOMAP2K4 (Homo sapiens)150429744DNA:SNPs:promoter: -1304G>G and -1304T>G (rs3826392) (human)RGD 
Map2k4Ratcolorectal cancer severityISOMAP2K4 (Homo sapiens)9068941protein:decreased expression:colorectum (human)RGDPMID:28423721 and REF_RGD_ID:150429743
Map2k4Ratgastric adenocarcinoma severityISOMAP2K4 (Homo sapiens)150429764protein:increased expression:stomach (human)RGD 
Map2k4Rathepatocellular carcinoma  ISOMAP2K4 (Homo sapiens)150429765protein:decreased expression:liver (human)RGD 
Map2k4Ratinvasive ductal carcinoma disease_progressionISOMAP2K4 (Homo sapiens)2289400 RGD 
Map2k4Ratlaryngeal squamous cell carcinoma severityISOMAP2K4 (Homo sapiens)150429781associated with Neoplasm Metastasis more ...RGD 
Map2k4Ratlung adenocarcinoma  ISOMap2k4 (Mus musculus)150429821 RGD 
Map2k4Ratlung adenocarcinoma severityISOMap2k4 (Mus musculus)150429783 RGD 
Map2k4Ratlung cancer amelioratesISOMAP2K4 (Homo sapiens)150429822DNA:SNP:promoter: -1304T>G (rs3826392) (human)RGD 
Map2k4Ratlung non-small cell carcinoma amelioratesISOMAP2K4 (Homo sapiens)11521299associated with Postoperative Complications and DNA:SNP:intron: (rs12452497)(human)RGD 
Map2k4Ratnasopharynx carcinoma amelioratesISOMAP2K4 (Homo sapiens)150429759DNA:SNP:promoter: -1304T>G and -1304G>G (human)RGD 
Map2k4Ratnasopharynx carcinoma amelioratesISOMAP2K4 (Homo sapiens)150429763associated with Epstein-Barr Virus Infections more ...RGD 
Map2k4RatNeoplasm Metastasis disease_progressionISOMAP2K4 (Homo sapiens)150429749associated with oral squamous cell carcinoma more ...RGD 
Map2k4RatOvarian Neoplasms disease_progressionISOMap2k4 (Mus musculus)2293338expression of the mouse gene inhibits metastatic colonization of secondary sites by cancer cells in the SKOV3ip.1 cell line model systemRGD 
Map2k4Ratovarian serous carcinoma  ISOMAP2K4 (Homo sapiens)2293332ovarian serous carcinomaRGD 
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Original Reference(s)
Map2k4Ratneuroblastoma  ISOMAP2K4 (Homo sapiens)8554872ClinVar Annotator: match by term: Neuroblastoma more ...ClinVarPMID:26822237
Map2k4RatNeurodevelopmental Disorders  ISOMAP2K4 (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868

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Original Reference(s)
Map2k4Rat1,2-dimethylhydrazine decreases expressionISOMap2k4 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of MAP2K4 mRNACTDPMID:22206623
Map2k4Rat17beta-estradiol increases expressionISOMAP2K4 (Homo sapiens)6480464Estradiol results in increased expression of MAP2K4 mRNACTDPMID:23094148
Map2k4Rat17beta-estradiol increases expressionISOMap2k4 (Mus musculus)6480464Estradiol results in increased expression of MAP2K4 mRNACTDPMID:39298647
Map2k4Rat17beta-estradiol multiple interactionsISOMAP2K4 (Homo sapiens)6480464IGF1R mutant form inhibits the reaction [Estradiol results in increased expression of MAP2K4 mRNA]CTDPMID:23094148
Map2k4Rat17beta-hydroxy-5alpha-androstan-3-one increases expressionISOMAP2K4 (Homo sapiens)6480464Dihydrotestosterone results in increased expression of MAP2K4 mRNACTDPMID:29581250
Map2k4Rat2,2',4,4'-Tetrabromodiphenyl ether decreases expressionISOMAP2K4 (Homo sapiens)64804642 more ...CTDPMID:31675489
Map2k4Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOMap2k4 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of MAP2K4 mRNACTDPMID:21570461
Map2k4Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of MAP2K4 mRNACTDPMID:32109520
Map2k4Rat2,4,6-tribromophenol decreases expressionISOMAP2K4 (Homo sapiens)64804642 more ...CTDPMID:31675489
Map2k4Rat3,3',5,5'-tetrabromobisphenol A decreases expressionISOMAP2K4 (Homo sapiens)6480464tetrabromobisphenol A results in decreased expression of MAP2K4 proteinCTDPMID:31675489
Map2k4Rat4,4'-sulfonyldiphenol increases expressionISOMap2k4 (Mus musculus)6480464bisphenol S results in increased expression of MAP2K4 mRNACTDPMID:39298647
Map2k4Rat4,4'-sulfonyldiphenol multiple interactionsISOMAP2K4 (Homo sapiens)6480464[bisphenol S co-treated with Fulvestrant] results in increased methylation of MAP2K4 geneCTDPMID:31601247
Map2k4Rat4-hydroxyphenyl retinamide multiple interactionsISOMAP2K4 (Homo sapiens)6480464Butylated Hydroxyanisole inhibits the reaction [Fenretinide results in increased phosphorylation of MAP2K4 protein]CTDPMID:16407847
Map2k4Rat4-hydroxyphenyl retinamide increases phosphorylationISOMAP2K4 (Homo sapiens)6480464Fenretinide results in increased phosphorylation of MAP2K4 proteinCTDPMID:16407847
Map2k4Rat6-propyl-2-thiouracil decreases expressionEXP 6480464Propylthiouracil results in decreased expression of MAP2K4 mRNACTDPMID:24780913
Map2k4Ratacetamide decreases expressionEXP 6480464acetamide results in decreased expression of MAP2K4 mRNACTDPMID:31881176
Map2k4RatAciculatin multiple interactionsISOMap2k4 (Mus musculus)6480464aciculatin inhibits the reaction [Lipopolysaccharides results in increased phosphorylation of MAP2K4 protein]CTDPMID:21548916
Map2k4Ratacrylamide increases expressionISOMAP2K4 (Homo sapiens)6480464Acrylamide results in increased expression of MAP2K4 mRNACTDPMID:32763439
Map2k4Ratactinomycin D decreases expressionISOMAP2K4 (Homo sapiens)6480464Dactinomycin results in decreased expression of MAP2K4 mRNACTDPMID:16001973
Map2k4Ratafimoxifene decreases response to substanceISOMAP2K4 (Homo sapiens)6480464MAP2K4 results in decreased susceptibility to afimoxifeneCTDPMID:21233418

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Biological Process
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Original Reference(s)
Map2k4Ratcell growth involved in cardiac muscle cell development  IMP 7495831 RGD 
Map2k4Ratcellular response to mechanical stimulus involved_inISOMAP2K4 (Homo sapiens)1624291 PMID:19593445RGDPMID:19593445
Map2k4Ratcellular response to sorbitol  IEP 7243113 RGD 
Map2k4Ratintrinsic apoptotic signaling pathway in response to hydrogen peroxide involved_inISOMap2k4 (Mus musculus)1624291 PMID:24705900RGDPMID:24705900
Map2k4RatJNK cascade  IDA 2298577 RGD 
Map2k4RatMAPK cascade involved_inIEAARBA:ARBA000292211600115GO_REF:0000117UniProtGO_REF:0000117
Map2k4RatMAPK cascade acts_upstream_of_or_withinISOMap2k4 (Mus musculus)1624291PR:Q62073 PMID:12556533RGDPMID:12556533
Map2k4Ratnegative regulation of motor neuron apoptotic process acts_upstream_of_or_withinISOMap2k4 (Mus musculus)1624291MGI:3769117 PMID:25100604RGDPMID:25100604
Map2k4Ratpositive regulation of apoptotic process  IMP 2293345TGF-beta1 treated FaO hepatoma cellsRGD 
Map2k4Ratpositive regulation of DNA replication  IMP 2293350 RGD 
Map2k4Ratpositive regulation of JNK cascade  IDA 2298577 RGD 
Map2k4Ratpositive regulation of neuron apoptotic process  IMP 2293340 RGD 
Map2k4Ratpositive regulation of protein phosphorylation  IDA 2293351 RGD 
Map2k4Ratprotein phosphorylation  IDA 2293351 RGD 
Map2k4Ratprotein phosphorylation  IDA 2298577 RGD 
Map2k4Ratresponse to wounding acts_upstream_of_or_withinISOMap2k4 (Mus musculus)1624291MGI:3769117 PMID:25100604RGDPMID:25100604
Map2k4Ratsmooth muscle cell apoptotic process involved_inISOMap2k4 (Mus musculus)1624291 PMID:24705900RGDPMID:24705900
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Cellular Component

  
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Original Reference(s)
Map2k4Rataxon  IDA 2293331axon cytoplasmRGD 
Map2k4Ratdendrite cytoplasm  IDA 2293331 RGD 
Map2k4Ratperikaryon  IDA 2293331 RGD 

Molecular Function
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Original Reference(s)
Map2k4RatATP binding enablesIEAUniRule:UR0015033411600115GO_REF:0000104UniProtGO_REF:0000104
Map2k4RatATP binding enablesIEAUniProtKB-KW:KW-00671600115GO_REF:0000043UniProtGO_REF:0000043
Map2k4RatATP binding enablesIEAInterPro:IPR000719 and InterPro:IPR0174411600115GO_REF:0000002InterProGO_REF:0000002
Map2k4RatJUN kinase kinase activity  IDA 2293351 RGD 
Map2k4RatJUN kinase kinase activity  IDA 2298577 RGD 
Map2k4Ratkinase activity enablesIEAUniProtKB-KW:KW-04181600115GO_REF:0000043UniProtGO_REF:0000043
Map2k4RatMAP kinase kinase activity  IDA 2293351 RGD 
Map2k4Ratmolecular adaptor activity enablesISOMAP2K4 (Homo sapiens)1624291 PMID:34439869RGDPMID:34439869
Map2k4Ratnucleotide binding enablesIEAUniRule:UR0015033411600115GO_REF:0000104UniProtGO_REF:0000104
Map2k4Ratnucleotide binding enablesIEAUniProtKB-KW:KW-05471600115GO_REF:0000043UniProtGO_REF:0000043
Map2k4Ratprotein binding  IPIMapk8ip3 (Rattus norvegicus)2293339 RGD 
Map2k4Ratprotein binding enablesISOMAP2K4 (Homo sapiens)1624291UniProtKB:P45983 more ...RGDPMID:15299019 more ...
Map2k4Ratprotein binding enablesISOMap2k4 (Mus musculus)1624291UniProtKB:P53349 more ...RGDPMID:10523642 and PMID:14500727
Map2k4Ratprotein kinase activity enablesIEAInterPro:IPR000719 and InterPro:IPR0082711600115GO_REF:0000002InterProGO_REF:0000002
Map2k4Ratprotein serine/threonine kinase activity enablesIEAUniProtKB-KW:KW-07231600115GO_REF:0000043UniProtGO_REF:0000043
Map2k4Rattransferase activity enablesIEAUniProtKB-KW:KW-08081600115GO_REF:0000043UniProtGO_REF:0000043
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RGD Manual Annotations


  

Imported Annotations - SMPDB

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Original Reference(s)
Map2k4RatFc epsilon receptor mediated signaling pathway  ISOMAP2K4 (Homo sapiens)10402751 SMPDBSMP:00358

Imported Annotations - KEGG (archival)

Imported Annotations - PID (archival)


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#
Reference Title
Reference Citation
1. Map2k4 functions as a tumor suppressor in lung adenocarcinoma and inhibits tumor cell invasion by decreasing peroxisome proliferator-activated receptor γ2 expression. Ahn YH, etal., Mol Cell Biol. 2011 Nov;31(21):4270-85. doi: 10.1128/MCB.05562-11. Epub 2011 Sep 6.
2. The Ras/Rac1/Cdc42/SEK/JNK/c-Jun cascade is a key pathway by which agonists stimulate DNA synthesis in primary cultures of rat hepatocytes. Auer KL, etal., Mol Biol Cell. 1998 Mar;9(3):561-73.
3. Stress- and cell type-dependent regulation of transfected c-Jun N-terminal kinase and mitogen-activated protein kinase kinase isoforms. Butterfield L, etal., Biochem J. 1999 Mar 15;338 ( Pt 3):681-6.
4. Pro-life role for c-Jun N-terminal kinase and p38 mitogen-activated protein kinase at rostral ventrolateral medulla in experimental brain stem death. Chang AY J Biomed Sci. 2012 Nov 17;19:96. doi: 10.1186/1423-0127-19-96.
5. Influence of sleep deprivation on expression of MKK4 and c-fos in the mandibular condylar cartilage of rats. Chen J, etal., Br J Oral Maxillofac Surg. 2013 Dec;51(8):e250-5. doi: 10.1016/j.bjoms.2013.06.010. Epub 2013 Jul 13.
6. Role of the stress-activated protein kinases in endothelin-induced cardiomyocyte hypertrophy. Choukroun G, etal., J Clin Invest. 1998 Oct 1;102(7):1311-20.
7. Toll-like receptor 2-mediated sequential activation of MyD88 and MAPKs contributes to lipopolysaccharide-induced sp-a gene expression in human alveolar epithelial cells. Chuang CY, etal., Immunobiology. 2011 Jun;216(6):707-14. doi: 10.1016/j.imbio.2010.10.009. Epub 2010 Nov 4.
8. The mitogen-activated protein kinase kinase 4 has a pro-oncogenic role in skin cancer. Finegan KG and Tournier C, Cancer Res. 2010 Jul 15;70(14):5797-806. doi: 10.1158/0008-5472.CAN-09-3669. Epub 2010 Jul 7.
9. Immunolocalization of the mitogen-activated protein kinases p42MAPK and JNK1, and their regulatory kinases MEK1 and MEK4, in adult rat central nervous system. Flood DG, etal., J Comp Neurol. 1998 Aug 31;398(3):373-92.
10. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
11. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
12. Both p38alpha(MAPK) and JNK/SAPK pathways are important for induction of nitric-oxide synthase by interleukin-1beta in rat glomerular mesangial cells. Guan Z, etal., J Biol Chem. 1999 Dec 17;274(51):36200-6.
13. Activation of ASK1, downstream MAPKK and MAPK isoforms during cardiac ischaemia. Harding SJ, etal., Biochim Biophys Acta. 2010 Sep;1802(9):733-40. doi: 10.1016/j.bbadis.2010.06.005. Epub 2010 Jun 13.
14. Increased expression of IRE1alpha and stress-related signal transduction proteins in ischemia-reperfusion injured retina. Hata N, etal., Clin Ophthalmol. 2008 Dec;2(4):743-52.
15. The p38 kinases MKK4 and MKK6 suppress metastatic colonization in human ovarian carcinoma. Hickson JA, etal., Cancer Res. 2006 Feb 15;66(4):2264-70.
16. Genetic variation in the TNF/TRAF2/ASK1/p38 kinase signaling pathway as markers for postoperative pulmonary complications in lung cancer patients. Hildebrandt MA, etal., Sci Rep. 2015 Jul 13;5:12068. doi: 10.1038/srep12068.
17. Overexpression of mitogen-activated protein kinase kinase 4 and nuclear factor-kappaB in laryngeal squamous cell carcinoma: a potential indicator for poor prognosis. Huang C, etal., Oncol Rep. 2009 Jul;22(1):89-95.
18. [The relationship between expression of mitogen-activated protein kinase kinase 4 and metastasis in oral squamous cell carcinoma]. Jiang N, etal., Hua Xi Kou Qiang Yi Xue Za Zhi. 2011 Oct;29(5):555-8.
19. The c-jun kinase/stress-activated pathway: regulation, function and role in human disease. Johnson GL and Nakamura K, Biochim Biophys Acta. 2007 Aug;1773(8):1341-8. Epub 2007 Jan 4.
20. Core signaling pathways in human pancreatic cancers revealed by global genomic analyses. Jones S, etal., Science. 2008 Sep 26;321(5897):1801-6. Epub 2008 Sep 4.
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PMID:12556533   PMID:17559804   PMID:17568772   PMID:19248828   PMID:19593445   PMID:21351092   PMID:24487067   PMID:24705900   PMID:24721794   PMID:25100604   PMID:29072705   PMID:31710596  
PMID:36164393  



Map2k4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81050,842,348 - 50,947,063 (-)NCBIGRCr8
mRatBN7.21050,343,227 - 50,447,956 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1050,344,915 - 50,447,993 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1055,014,269 - 55,116,147 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01054,504,259 - 54,606,140 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01050,012,148 - 50,114,010 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01052,196,121 - 52,301,887 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1052,196,124 - 52,290,657 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01051,951,707 - 52,054,098 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41052,009,149 - 52,041,599 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11052,020,408 - 52,055,249 (-)NCBI
Celera1049,553,065 - 49,624,419 (-)NCBICelera
Cytogenetic Map10q24NCBI
MAP2K4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381712,020,877 - 12,143,828 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1712,020,829 - 12,143,830 (+)EnsemblGRCh38hg38GRCh38
GRCh371711,924,194 - 12,047,145 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361711,864,860 - 11,987,776 (+)NCBINCBI36Build 36hg18NCBI36
Build 341711,864,859 - 11,987,775NCBI
Celera1711,954,698 - 12,077,624 (+)NCBICelera
Cytogenetic Map17p12ENTREZGENE
HuRef1711,825,033 - 11,947,931 (+)NCBIHuRef
CHM1_11711,933,251 - 12,056,267 (+)NCBICHM1_1
T2T-CHM13v2.01711,928,859 - 12,051,837 (+)NCBIT2T-CHM13v2.0
Map2k4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391165,579,070 - 65,679,185 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1165,579,069 - 65,679,123 (-)EnsemblGRCm39 Ensembl
GRCm381165,688,244 - 65,788,359 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1165,688,243 - 65,788,297 (-)EnsemblGRCm38mm10GRCm38
MGSCv371165,501,746 - 65,601,799 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361165,504,439 - 65,604,492 (-)NCBIMGSCv36mm8
Celera1172,623,125 - 72,726,188 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1140.53NCBI
Map2k4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554675,187,356 - 5,307,692 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554675,188,036 - 5,295,570 (-)NCBIChiLan1.0ChiLan1.0
MAP2K4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21961,596,659 - 61,721,974 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11766,403,318 - 66,528,369 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01739,497,105 - 39,622,331 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11744,246,301 - 44,359,906 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1744,248,857 - 44,359,909 (-)Ensemblpanpan1.1panPan2
MAP2K4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1536,142,610 - 36,243,673 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl536,118,388 - 36,241,296 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha536,246,628 - 36,382,182 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0536,216,260 - 36,351,866 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl536,216,250 - 36,351,818 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1536,183,407 - 36,318,935 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0536,137,113 - 36,272,679 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0536,321,228 - 36,456,796 (+)NCBIUU_Cfam_GSD_1.0
Map2k4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560251,288,135 - 51,356,168 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365954,727,108 - 4,830,662 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365954,762,327 - 4,828,433 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAP2K4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1256,402,075 - 56,516,238 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11256,402,029 - 56,516,217 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21259,330,511 - 59,409,571 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MAP2K4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11611,366,610 - 11,485,411 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1611,366,751 - 11,486,125 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660599,768,762 - 9,889,281 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Map2k4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478614,457,452 - 14,597,027 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478614,457,382 - 14,597,027 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Map2k4
425 total Variants

Predicted Target Of
Summary Value
Count of predictions:37
Count of miRNA genes:34
Interacting mature miRNAs:37
Transcripts:ENSRNOT00000005293
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 73 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
61441Btemp1Thermal response to stress QTL 14body temperature trait (VT:0005535)core body temperature (CMO:0001036)103539245763642539Rat
9589136Insul27Insulin level QTL 2710.460.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)101147401056474010Rat
152025229Scl83Serum cholesterol level QTL 834.33blood cholesterol amount (VT:0000180)103571058068663659Rat
1578779Tcas10Tongue tumor susceptibility QTL 103.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)103129743976297439Rat
152025227Bw195Body weight QTL 1955.73body mass (VT:0001259)104698969968663659Rat
631564Apr3Acute phase response QTL 33.9blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)101527595560275955Rat
1298069Bp168Blood pressure QTL 1685.5blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)102652195798003205Rat
2293669Bmd33Bone mineral density QTL 334.50.0001femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)104944455181709989Rat
631552Vetf2Vascular elastic tissue fragility QTL 24.50.0002aorta elastic tissue integrity trait (VT:0010556)artery internal elastic lamina non-tumorous lesion count (CMO:0001913)104114263386142633Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1074336463851208Rat

1 to 10 of 73 rows
U18310  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81050,844,455 - 50,844,632 (+)Marker Load Pipeline
mRatBN7.21050,345,335 - 50,345,513 (+)MAPPERmRatBN7.2
Rnor_6.01052,195,865 - 52,196,042NCBIRnor6.0
Rnor_5.01051,951,451 - 51,951,628UniSTSRnor5.0
RGSC_v3.41052,008,893 - 52,009,070UniSTSRGSC3.4
Celera1049,552,809 - 49,552,986UniSTS
Cytogenetic Map10q24UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000005293   ⟹   ENSRNOP00000005293
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1050,344,915 - 50,417,289 (-)Ensembl
Rnor_6.0 Ensembl1052,196,124 - 52,290,657 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000109134   ⟹   ENSRNOP00000081371
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1050,344,915 - 50,447,932 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000112493   ⟹   ENSRNOP00000095727
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1050,344,915 - 50,447,993 (-)Ensembl
RefSeq Acc Id: NM_001030023   ⟹   NP_001025194
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81050,844,034 - 50,947,039 (-)NCBI
mRatBN7.21050,344,915 - 50,447,932 (-)NCBI
Rnor_6.01052,196,121 - 52,301,887 (-)NCBI
Rnor_5.01051,951,707 - 52,054,098 (-)NCBI
RGSC_v3.41052,009,149 - 52,041,599 (-)RGD
Celera1049,553,065 - 49,624,419 (-)RGD
Sequence:
RefSeq Acc Id: XM_039085426   ⟹   XP_038941354
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81050,842,348 - 50,947,063 (-)NCBI
mRatBN7.21050,343,227 - 50,447,956 (-)NCBI
RefSeq Acc Id: XM_063268626   ⟹   XP_063124696
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81050,842,348 - 50,947,061 (-)NCBI
RefSeq Acc Id: XM_063268627   ⟹   XP_063124697
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81050,842,348 - 50,947,060 (-)NCBI
RefSeq Acc Id: XM_063268628   ⟹   XP_063124698
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81050,842,348 - 50,916,010 (-)NCBI
RefSeq Acc Id: XM_063268629   ⟹   XP_063124699
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81050,842,348 - 50,916,174 (-)NCBI
RefSeq Acc Id: NP_001025194   ⟸   NM_001030023
- UniProtKB: Q4KSH6 (UniProtKB/TrEMBL),   F1LP57 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000005293   ⟸   ENSRNOT00000005293
RefSeq Acc Id: XP_038941354   ⟸   XM_039085426
- Peptide Label: isoform X3
- UniProtKB: S4VP54 (UniProtKB/TrEMBL),   F1LP57 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000081371   ⟸   ENSRNOT00000109134
Ensembl Acc Id: ENSRNOP00000095727   ⟸   ENSRNOT00000112493
Protein kinase

Name Modeler Protein Id AA Range Protein Structure
AF-F1LP57-F1-model_v2 AlphaFold F1LP57 1-372 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 31 of 31 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-24703 BioCyc
Ensembl Genes ENSRNOG00000003834 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000005293.8 UniProtKB/TrEMBL
  ENSRNOT00000109134 ENTREZGENE
  ENSRNOT00000109134.1 UniProtKB/TrEMBL
  ENSRNOT00000112493 ENTREZGENE
  ENSRNOT00000112493.1 UniProtKB/TrEMBL
  ENSRNOT00000141706 ENTREZGENE
Gene3D-CATH Phosphorylase Kinase, domain 1 UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro Kinase-like_dom UniProtKB/TrEMBL
  Prot_kinase_cat_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser/Thr_prot_kinase_AS UniProtKB/TrEMBL
KEGG Report rno:287398 UniProtKB/TrEMBL
NCBI Gene 287398 ENTREZGENE
PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 UniProtKB/TrEMBL
  DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/TrEMBL
PhenoGen Map2k4 PhenoGen
PIRSF Integrin-linked_kinase UniProtKB/TrEMBL
PROSITE PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
RatGTEx ENSRNOG00000003834 RatGTEx
SMART S_TKc UniProtKB/TrEMBL
Superfamily-SCOP Kinase_like UniProtKB/TrEMBL
UniProt A6HFF9_RAT UniProtKB/TrEMBL
  F1LP57 ENTREZGENE, UniProtKB/TrEMBL
  Q4KSH6 ENTREZGENE, UniProtKB/TrEMBL
  S4VP54 ENTREZGENE, UniProtKB/TrEMBL
1 to 31 of 31 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Map2k4  mitogen activated protein kinase kinase 4  Map2k4_predicted  mitogen activated protein kinase kinase 4 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Map2k4_predicted  mitogen activated protein kinase kinase 4 (predicted)      Symbol and Name status set to approved 70820 APPROVED