Psmd7 (proteasome 26S subunit, non-ATPase 7) - Rat Genome Database

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Gene: Psmd7 (proteasome 26S subunit, non-ATPase 7) Rattus norvegicus
Analyze
Symbol: Psmd7
Name: proteasome 26S subunit, non-ATPase 7
RGD ID: 1306902
Description: Predicted to enable protein homodimerization activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be part of proteasome regulatory particle. Orthologous to human PSMD7 (proteasome 26S subunit, non-ATPase 7); PARTICIPATES IN ubiquitin/proteasome degradation pathway; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dibromophenyl 2,4,5-tribromophenyl ether.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 26S proteasome non-ATPase regulatory subunit 7; LOC307821; proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81952,404,032 - 52,411,316 (-)NCBIGRCr8
mRatBN7.21935,494,317 - 35,501,605 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1935,494,316 - 35,501,588 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1942,309,741 - 42,317,031 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01942,963,101 - 42,970,391 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01945,267,767 - 45,275,065 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01939,639,432 - 39,646,718 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1939,639,431 - 39,646,693 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01950,501,208 - 50,508,494 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41937,452,152 - 37,459,440 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11937,457,032 - 37,466,979 (-)NCBI
Celera1934,916,441 - 34,923,729 (-)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 107 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Psmd7Rat(+)-schisandrin B multiple interactionsEXP 6480464schizandrin B inhibits the reaction [Carbon Tetrachloride results in increased expression of PSMD7 mRNA]CTDPMID:31150632
Psmd7Rat1,2-dimethylhydrazine increases expressionISOPsmd7 (Mus musculus)64804641 and 2-Dimethylhydrazine results in increased expression of PSMD7 mRNACTDPMID:22206623
Psmd7Rat1,2-dimethylhydrazine multiple interactionsISOPsmd7 (Mus musculus)6480464Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in increased expression of PSMD7 mRNA]CTDPMID:22206623
Psmd7Rat17alpha-ethynylestradiol increases expressionISOPsmd7 (Mus musculus)6480464Ethinyl Estradiol results in increased expression of PSMD7 mRNACTDPMID:17942748
Psmd7Rat17alpha-ethynylestradiol multiple interactionsISOPsmd7 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of PSMD7 mRNACTDPMID:17942748
Psmd7Rat17alpha-ethynylestradiol affects expressionISOPsmd7 (Mus musculus)6480464Ethinyl Estradiol affects the expression of PSMD7 mRNACTDPMID:17555576
Psmd7Rat17beta-estradiol increases expressionISOPsmd7 (Mus musculus)6480464Estradiol results in increased expression of PSMD7 mRNACTDPMID:39298647
Psmd7Rat1H-pyrazole increases expressionISOPsmd7 (Mus musculus)6480464pyrazole results in increased expression of PSMD7 mRNACTDPMID:17945193
Psmd7Rat2,2',4,4'-Tetrabromodiphenyl ether affects expressionISOPsmd7 (Mus musculus)64804642 more ...CTDPMID:30294300
Psmd7Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOPsmd7 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of PSMD7 mRNACTDPMID:17942748
Psmd7Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of PSMD7 mRNACTDPMID:34747641
Psmd7Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOPsmd7 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of PSMD7 mRNACTDPMID:21570461
Psmd7Rat2,4,6-tribromophenol decreases expressionISOPSMD7 (Homo sapiens)64804642 more ...CTDPMID:31675489
Psmd7Rat2,4-dibromophenyl 2,4,5-tribromophenyl ether increases expressionEXP 64804642 more ...CTDPMID:19954255
Psmd7Rat2,4-dibromophenyl 2,4,5-tribromophenyl ether decreases expressionEXP 64804642 more ...CTDPMID:19954255
Psmd7Rat2,4-dinitrotoluene affects expressionEXP 64804642 and 4-dinitrotoluene affects the expression of PSMD7 mRNACTDPMID:21346803
Psmd7Rat2,6-dimethoxyphenol multiple interactionsISOPSMD7 (Homo sapiens)6480464[Furaldehyde co-treated with pyrogallol 1 and 3-dimethyl ether] results in decreased expression of PSMD7 proteinCTDPMID:38598786
Psmd7Rat2,6-dinitrotoluene affects expressionEXP 64804642 and 6-dinitrotoluene affects the expression of PSMD7 mRNACTDPMID:21346803
Psmd7Rat3-isobutyl-1-methyl-7H-xanthine multiple interactionsISOPSMD7 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in increased expression of PSMD7 mRNACTDPMID:28628672
Psmd7Rat3H-1,2-dithiole-3-thione increases expressionISOPsmd7 (Mus musculus)64804641 and 2-dithiol-3-thione results in increased expression of PSMD7 mRNACTDPMID:15375163

1 to 20 of 107 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Psmd7Ratproteasome-mediated ubiquitin-dependent protein catabolic process involved_inIBAFB:FBgn0002787 and PANTHER:PTN0000570401600115GO_REF:0000033GO_CentralGO_REF:0000033

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Psmd7Ratproteasome complex part_ofISOPSMD7 (Homo sapiens)1624291 PMID:17323924RGDPMID:17323924
Psmd7Ratproteasome complex part_ofIEAUniProtKB-KW:KW-06471600115GO_REF:0000043UniProtGO_REF:0000043
Psmd7Ratproteasome complex part_ofIEAUniProtKB:P51665 and ensembl:ENSP000002193131600115GO_REF:0000107EnsemblGO_REF:0000107
Psmd7Ratproteasome complex part_ofIBAFB:FBgn0002787 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Psmd7Ratproteasome complex part_ofIEAARBA:ARBA000290171600115GO_REF:0000117UniProtGO_REF:0000117
Psmd7Ratproteasome regulatory particle part_ofIEAInterPro:IPR0338581600115GO_REF:0000002InterProGO_REF:0000002
Psmd7Ratproteasome regulatory particle part_ofISOPsmd7 (Mus musculus)1624291 PMID:20498273RGDPMID:20498273
Psmd7Ratproteasome regulatory particle part_ofIEAUniProtKB:P26516 and ensembl:ENSMUSP000000419681600115GO_REF:0000107EnsemblGO_REF:0000107

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Psmd7Ratmetallopeptidase activity enablesIEAInterPro:IPR0005551600115GO_REF:0000002InterProGO_REF:0000002
Psmd7Ratpeptidase activity enablesIEAInterPro:IPR0005551600115GO_REF:0000002InterProGO_REF:0000002
Psmd7Ratprotein binding enablesISOPSMD7 (Homo sapiens)1624291UniProtKB:O00487 more ...RGDPMID:19615732 more ...
Psmd7Ratprotein homodimerization activity enablesISOPSMD7 (Homo sapiens)1624291 PMID:17559875RGDPMID:17559875
Psmd7Ratprotein homodimerization activity enablesIEAUniProtKB:P51665 and ensembl:ENSP000002193131600115GO_REF:0000107EnsemblGO_REF:0000107

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Psmd7Ratubiquitin/proteasome degradation pathway  IEA 6907045 KEGGrno:03050

#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:9688553   PMID:10657252   PMID:17323924   PMID:17559875   PMID:19946888   PMID:20458337   PMID:20498273   PMID:21630459   PMID:21883213   PMID:22871113   PMID:23106098   PMID:23376485  
PMID:31904090  



Psmd7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81952,404,032 - 52,411,316 (-)NCBIGRCr8
mRatBN7.21935,494,317 - 35,501,605 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1935,494,316 - 35,501,588 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1942,309,741 - 42,317,031 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01942,963,101 - 42,970,391 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01945,267,767 - 45,275,065 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01939,639,432 - 39,646,718 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1939,639,431 - 39,646,693 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01950,501,208 - 50,508,494 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41937,452,152 - 37,459,440 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11937,457,032 - 37,466,979 (-)NCBI
Celera1934,916,441 - 34,923,729 (-)NCBICelera
Cytogenetic Map19q12NCBI
PSMD7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381674,296,814 - 74,306,288 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1674,296,814 - 74,306,288 (+)EnsemblGRCh38hg38GRCh38
GRCh371674,330,712 - 74,340,186 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361672,888,182 - 72,897,687 (+)NCBINCBI36Build 36hg18NCBI36
Build 341672,888,181 - 72,897,685NCBI
Celera1658,643,945 - 58,653,450 (+)NCBICelera
Cytogenetic Map16q23.1NCBI
HuRef1660,097,897 - 60,107,410 (+)NCBIHuRef
CHM1_11675,742,481 - 75,751,994 (+)NCBICHM1_1
T2T-CHM13v2.01680,114,598 - 80,124,072 (+)NCBIT2T-CHM13v2.0
Psmd7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398108,307,012 - 108,315,114 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8108,307,013 - 108,315,096 (-)EnsemblGRCm39 Ensembl
GRCm388107,580,380 - 107,588,482 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8107,580,381 - 107,588,464 (-)EnsemblGRCm38mm10GRCm38
MGSCv378110,104,280 - 110,112,382 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368110,469,510 - 110,477,611 (-)NCBIMGSCv36mm8
Celera8111,811,707 - 111,820,086 (-)NCBICelera
Cytogenetic Map8D3NCBI
cM Map854.38NCBI
Psmd7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554846,824,467 - 6,834,493 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554846,824,467 - 6,832,251 (+)NCBIChiLan1.0ChiLan1.0
PSMD7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21879,838,951 - 79,848,483 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11685,764,637 - 85,774,142 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01650,690,418 - 50,699,924 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11674,140,338 - 74,149,833 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1674,140,338 - 74,149,833 (+)Ensemblpanpan1.1panPan2
PSMD7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1579,785,620 - 79,793,793 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl579,785,645 - 79,793,779 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha579,774,583 - 79,783,222 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0580,215,857 - 80,224,514 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl580,215,876 - 80,228,253 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1580,044,017 - 80,052,656 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0579,733,101 - 79,741,752 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0580,365,793 - 80,374,434 (+)NCBIUU_Cfam_GSD_1.0
Psmd7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934939,621,738 - 39,630,092 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647519,958,996 - 19,967,412 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647519,959,022 - 19,967,393 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PSMD7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl617,047,430 - 17,057,176 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1617,047,420 - 17,057,170 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
PSMD7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1557,433,469 - 57,443,013 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl557,433,472 - 57,443,337 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604720,163,279 - 20,172,820 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Psmd7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474616,470,221 - 16,482,047 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474616,470,999 - 16,481,791 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Psmd7
28 total Variants

Predicted Target Of
Summary Value
Count of predictions:276
Count of miRNA genes:176
Interacting mature miRNAs:203
Transcripts:ENSRNOT00000019104
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 25 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
9590298Uminl5Urine mineral level QTL 53.590.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)19136824771Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)192932249057337602Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
9590090Insglur8Insulin/glucose ratio QTL 810.810.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)19136824771Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)191560502346559041Rat
1549835Tcas7Tongue tumor susceptibility QTL 70.001tongue integrity trait (VT:0010553)squamous cell carcinoma of the head and neck tumor number (CMO:0001876)192481797839654489Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat

1 to 10 of 25 rows
RH133091  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21935,494,383 - 35,494,598 (+)MAPPERmRatBN7.2
Rnor_6.01939,639,499 - 39,639,713NCBIRnor6.0
Rnor_5.01950,501,275 - 50,501,489UniSTSRnor5.0
RGSC_v3.41937,452,219 - 37,452,433UniSTSRGSC3.4
Celera1934,916,508 - 34,916,722UniSTS
RH 3.4 Map19316.1UniSTS
Cytogenetic Map19q12UniSTS
RH143405  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21935,494,947 - 35,495,119 (+)MAPPERmRatBN7.2
Rnor_6.01939,640,063 - 39,640,234NCBIRnor6.0
Rnor_5.01950,501,839 - 50,502,010UniSTSRnor5.0
RGSC_v3.41937,452,783 - 37,452,954UniSTSRGSC3.4
Celera1934,917,072 - 34,917,243UniSTS
RH 3.4 Map19294.5UniSTS
Cytogenetic Map19q12UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000019104   ⟹   ENSRNOP00000019104
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1935,494,318 - 35,501,543 (-)Ensembl
Rnor_6.0 Ensembl1939,639,431 - 39,646,693 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000108420   ⟹   ENSRNOP00000090210
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1935,494,512 - 35,501,546 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000110242   ⟹   ENSRNOP00000078910
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1935,494,316 - 35,501,588 (-)Ensembl
RefSeq Acc Id: NM_001107426   ⟹   NP_001100896
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81952,404,032 - 52,411,316 (-)NCBI
mRatBN7.21935,494,317 - 35,501,605 (-)NCBI
Rnor_6.01939,639,432 - 39,646,718 (-)NCBI
Rnor_5.01950,501,208 - 50,508,494 (-)NCBI
RGSC_v3.41937,452,152 - 37,459,440 (-)RGD
Celera1934,916,441 - 34,923,729 (-)RGD
Sequence:
Protein RefSeqs NP_001100896 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL92484 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000019104
  ENSRNOP00000019104.5
  ENSRNOP00000078910.1
  ENSRNOP00000090210.1
RefSeq Acc Id: NP_001100896   ⟸   NM_001107426
- UniProtKB: A6IZ06 (UniProtKB/TrEMBL),   A0A8I5ZM79 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000019104   ⟸   ENSRNOT00000019104
Ensembl Acc Id: ENSRNOP00000078910   ⟸   ENSRNOT00000110242
Ensembl Acc Id: ENSRNOP00000090210   ⟸   ENSRNOT00000108420
MPN

Name Modeler Protein Id AA Range Protein Structure
AF-D4AEH3-F1-model_v2 AlphaFold D4AEH3 1-320 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13701124
Promoter ID:EPDNEW_R11648
Type:initiation region
Name:Psmd7_1
Description:proteasome 26S subunit, non-ATPase 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01939,646,665 - 39,646,725EPDNEW


1 to 25 of 25 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-5751 BioCyc
Ensembl Genes ENSRNOG00000014097 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000019104 ENTREZGENE
  ENSRNOT00000019104.7 UniProtKB/TrEMBL
  ENSRNOT00000108420.1 UniProtKB/TrEMBL
  ENSRNOT00000110242.1 UniProtKB/TrEMBL
Gene3D-CATH Cytidine Deaminase, domain 2 UniProtKB/TrEMBL
InterPro Mov34_MPN_PAD1 UniProtKB/TrEMBL
  MPN UniProtKB/TrEMBL
  MPN_RPN7_8 UniProtKB/TrEMBL
  Rpn11/EIF3F_C UniProtKB/TrEMBL
KEGG Report rno:307821 UniProtKB/TrEMBL
NCBI Gene 307821 ENTREZGENE
PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7 UniProtKB/TrEMBL
  EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED UniProtKB/TrEMBL
Pfam MitMem_reg UniProtKB/TrEMBL
  Mov34 UniProtKB/TrEMBL
PhenoGen Psmd7 PhenoGen
PROSITE MPN UniProtKB/TrEMBL
RatGTEx ENSRNOG00000014097 RatGTEx
SMART JAB_MPN UniProtKB/TrEMBL
UniProt A0A8I5ZM79 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GIQ0_RAT UniProtKB/TrEMBL
  A6IZ06 ENTREZGENE, UniProtKB/TrEMBL
  D4AEH3_RAT UniProtKB/TrEMBL
1 to 25 of 25 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-08-19 Psmd7  proteasome 26S subunit, non-ATPase 7  Psmd7  proteasome (prosome, macropain) 26S subunit, non-ATPase, 7  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Psmd7  proteasome (prosome, macropain) 26S subunit, non-ATPase, 7   Psmd7_predicted  proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Psmd7_predicted  proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (predicted)      Symbol and Name status set to approved 70820 APPROVED