Bach1 (BTB domain and CNC homolog 1) - Rat Genome Database

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Gene: Bach1 (BTB domain and CNC homolog 1) Rattus norvegicus
Analyze
Symbol: Bach1
Name: BTB domain and CNC homolog 1
RGD ID: 1306693
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and ligand-modulated transcription factor activity. Predicted to be involved in DNA repair; negative regulation of transcription by RNA polymerase II; and positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of DNA-templated transcription. Predicted to be located in nucleus. Predicted to be part of RNA polymerase II transcription regulator complex. Orthologous to human BACH1 (BTB domain and CNC homolog 1); INTERACTS WITH 17beta-estradiol; 4-amino-2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: BTB and CNC homology 1; BTB and CNC homology 1 transcription factor; BTB and CNC homology 1, basic leucine zipper transcription factor 1; LOC100911490; LOC103690154; LOC304127; transcription regulator protein BACH1; transcription regulator protein BACH1-like
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81140,425,721 - 40,461,118 (+)NCBIGRCr8
mRatBN7.21126,939,429 - 26,974,876 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1126,939,480 - 26,972,447 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1135,637,561 - 35,670,105 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01128,337,824 - 28,370,368 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01127,526,892 - 27,559,119 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01127,364,913 - 27,398,713 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1127,364,916 - 27,398,842 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1127,598,719 - 27,611,811 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01131,133,137 - 31,153,652 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01131,219,581 - 31,228,721 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41127,467,207 - 27,500,173 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1126,683,083 - 26,716,048 (+)NCBICelera
Cytogenetic Map11q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 184 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bach1Rat(-)-selegiline multiple interactionsISOBACH1 (Homo sapiens)6480464Selegiline inhibits the reaction [Smoke analog affects the localization of BACH1 protein]CTDPMID:28108387
Bach1Rat(E)-cinnamyl alcohol multiple interactionsISOBACH1 (Homo sapiens)6480464BACH1 mRNA promotes the reaction [cinnamyl alcohol results in increased expression of HMOX1 mRNA]CTDPMID:26244607
Bach1Rat1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane multiple interactionsISOBACH1 (Homo sapiens)64804642 and 2'-(hydroxynitrosohydrazono)bis-ethanamine inhibits the reaction [alpha-pyrrolidinononanophenone analog results in increased expression of BACH1 protein]CTDPMID:38040126
Bach1Rat1,2-dimethylhydrazine multiple interactionsISOBach1 (Mus musculus)6480464Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in decreased expression of BACH1 mRNA]CTDPMID:22206623
Bach1Rat1,2-dimethylhydrazine decreases expressionISOBach1 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of BACH1 mRNACTDPMID:22206623
Bach1Rat1,4-benzoquinone multiple interactionsISOBACH1 (Homo sapiens)6480464quinone promotes the reaction [benzyloxycarbonylleucyl-leucyl-leucine aldehyde results in increased ubiquitination of BACH1 protein]CTDPMID:28645578
Bach1Rat1,4-benzoquinone affects localizationISOBACH1 (Homo sapiens)6480464quinone affects the localization of BACH1 proteinCTDPMID:28645578
Bach1Rat1,4-phenylenediamine multiple interactionsISOBACH1 (Homo sapiens)6480464BACH1 mRNA promotes the reaction [4-phenylenediamine results in increased expression of HMOX1 mRNA]CTDPMID:26244607
Bach1Rat1-chloro-2,4-dinitrobenzene multiple interactionsISOBACH1 (Homo sapiens)6480464BACH1 mRNA promotes the reaction [Dinitrochlorobenzene results in increased expression of HMOX1 mRNA]CTDPMID:26244607
Bach1Rat17beta-estradiol decreases expressionISOBACH1 (Homo sapiens)6480464Estradiol results in decreased expression of BACH1 mRNACTDPMID:33047385
Bach1Rat17beta-estradiol decreases expressionISOBach1 (Mus musculus)6480464Estradiol results in decreased expression of BACH1 mRNACTDPMID:39298647
Bach1Rat17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of BACH1 mRNACTDPMID:32145629
Bach1Rat17beta-estradiol multiple interactionsISOBACH1 (Homo sapiens)6480464[Arsenic co-treated with Estradiol] results in decreased expression of BACH1 mRNACTDPMID:33047385
Bach1Rat2,3',4,4',5-Pentachlorobiphenyl increases expressionISOBach1 (Mus musculus)64804642 more ...CTDPMID:31388691
Bach1Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOBach1 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of BACH1 mRNACTDPMID:19465110 more ...
Bach1Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOBach1 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of BACH1 mRNACTDPMID:21570461 and PMID:26377647
Bach1Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOBACH1 (Homo sapiens)6480464Tetrachlorodibenzodioxin results in decreased expression of BACH1 mRNACTDPMID:17101203
Bach1Rat2-butoxyethanol increases expressionISOBach1 (Mus musculus)6480464n-butoxyethanol results in increased expression of BACH1 mRNACTDPMID:19812364
Bach1Rat2-tert-butylhydroquinone affects localizationISOBACH1 (Homo sapiens)64804642-tert-butylhydroquinone affects the localization of BACH1 proteinCTDPMID:28645578
Bach1Rat2-tert-butylhydroquinone multiple interactionsISOBACH1 (Homo sapiens)64804642-tert-butylhydroquinone promotes the reaction [benzyloxycarbonylleucyl-leucyl-leucine aldehyde results in increased ubiquitination of BACH1 protein] and [ferric chloride results in increased oxidation of 2-tert-butylhydroquinone] promotes the reaction [2-tert-butylhydroquinone analog binds to BACH1 protein]CTDPMID:28645578

1 to 20 of 184 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bach1Ratnucleus located_inISOBACH1 (Homo sapiens)1624291 PMID:12511571 and PMID:24035498RGDPMID:12511571 and PMID:24035498
Bach1Ratnucleus located_inIEAUniProtKB-KW:KW-05391600115GO_REF:0000043UniProtGO_REF:0000043
Bach1Ratnucleus located_inISOBach1 (Mus musculus)1624291 PMID:8887638RGDPMID:8887638
Bach1Ratnucleus located_inIEAUniProtKB-SubCell:SL-01911600115GO_REF:0000044UniProtGO_REF:0000044
Bach1RatRNA polymerase II transcription regulator complex part_ofISOBACH1 (Homo sapiens)1624291 PMID:20102225 and PMID:23661758RGDPMID:20102225 and PMID:23661758

Molecular Function
1 to 14 of 14 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bach1RatDNA binding enablesIEAUniProtKB-KW:KW-02381600115GO_REF:0000043UniProtGO_REF:0000043
Bach1RatDNA binding enablesIEAInterPro:IPR004826 and InterPro:IPR0089171600115GO_REF:0000002InterProGO_REF:0000002
Bach1RatDNA binding enablesISOBach1 (Mus musculus)1624291 PMID:8887638RGDPMID:8887638
Bach1RatDNA-binding transcription activator activity, RNA polymerase II-specific enablesISOBach1 (Mus musculus)1624291 PMID:8887638RGDPMID:8887638
Bach1RatDNA-binding transcription factor activity enablesISOBach1 (Mus musculus)1624291 PMID:19170764 and PMID:8887638RGDPMID:19170764 and PMID:8887638
Bach1RatDNA-binding transcription factor activity enablesIEAInterPro:IPR004827 and InterPro:IPR0463471600115GO_REF:0000002InterProGO_REF:0000002
Bach1RatDNA-binding transcription factor activity, RNA polymerase II-specific enablesIBAMGI:102755 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Bach1RatDNA-binding transcription repressor activity, RNA polymerase II-specific enablesISOBACH1 (Homo sapiens)1624291 PMID:12511571 and PMID:24035498RGDPMID:12511571 and PMID:24035498
Bach1RatDNA-binding transcription repressor activity, RNA polymerase II-specific enablesISOBach1 (Mus musculus)1624291 PMID:8887638RGDPMID:8887638
Bach1Ratligand-modulated transcription factor activity enablesISOBACH1 (Homo sapiens)1624291 PMID:21555518RGDPMID:21555518
Bach1Ratprotein binding enablesISOBACH1 (Homo sapiens)1624291UniProtKB:O15525 more ...RGDPMID:20102225 more ...
Bach1Ratprotein binding enablesISOBach1 (Mus musculus)1624291PR:Q61827 more ...RGDPMID:19011633 and PMID:8887638
Bach1RatRNA polymerase II cis-regulatory region sequence-specific DNA binding enablesISOBach1 (Mus musculus)1624291 PMID:8887638RGDPMID:8887638
Bach1RatRNA polymerase II cis-regulatory region sequence-specific DNA binding enablesIBAMGI:102755 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
1 to 14 of 14 rows


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:8887638   PMID:11301010   PMID:12511571   PMID:16780588   PMID:16791210   PMID:19170764   PMID:21555518   PMID:24035498   PMID:28704479   PMID:34464885   PMID:36752556   PMID:36813742  
PMID:38573338   PMID:38906228   PMID:39043832   PMID:39173402  



Bach1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81140,425,721 - 40,461,118 (+)NCBIGRCr8
mRatBN7.21126,939,429 - 26,974,876 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1126,939,480 - 26,972,447 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1135,637,561 - 35,670,105 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01128,337,824 - 28,370,368 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01127,526,892 - 27,559,119 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01127,364,913 - 27,398,713 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1127,364,916 - 27,398,842 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1127,598,719 - 27,611,811 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01131,133,137 - 31,153,652 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01131,219,581 - 31,228,721 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41127,467,207 - 27,500,173 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1126,683,083 - 26,716,048 (+)NCBICelera
Cytogenetic Map11q11NCBI
BACH1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382129,298,922 - 29,361,894 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2129,194,071 - 29,630,751 (+)EnsemblGRCh38hg38GRCh38
GRCh372130,671,243 - 30,734,215 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362129,593,091 - 29,656,088 (+)NCBINCBI36Build 36hg18NCBI36
Build 342129,593,607 - 29,640,340NCBI
Celera2115,854,335 - 15,917,330 (+)NCBICelera
Cytogenetic Map21q21.3NCBI
HuRef2116,079,359 - 16,142,364 (+)NCBIHuRef
CHM1_12130,232,876 - 30,295,865 (+)NCBICHM1_1
T2T-CHM13v2.02127,664,831 - 27,727,787 (+)NCBIT2T-CHM13v2.0
Bach1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391687,495,842 - 87,530,234 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1687,495,833 - 87,530,234 (+)EnsemblGRCm39 Ensembl
GRCm381687,698,954 - 87,733,346 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1687,698,945 - 87,733,346 (+)EnsemblGRCm38mm10GRCm38
MGSCv371687,699,199 - 87,733,591 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361687,588,150 - 87,622,542 (+)NCBIMGSCv36mm8
Celera1687,895,225 - 87,930,573 (+)NCBICelera
Cytogenetic Map16C3.3NCBI
cM Map1649.84NCBI
Bach1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540728,678,181 - 28,701,399 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540728,678,181 - 28,701,115 (+)NCBIChiLan1.0ChiLan1.0
BACH1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22225,488,712 - 25,945,192 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12120,347,222 - 20,460,967 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02115,738,343 - 16,036,760 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12129,126,108 - 29,173,835 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2129,126,107 - 29,173,835 (+)Ensemblpanpan1.1panPan2
BACH1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13124,269,310 - 24,310,369 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3124,269,280 - 24,381,454 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3124,262,076 - 24,305,091 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03124,382,476 - 24,425,729 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3124,382,527 - 24,494,433 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13124,332,784 - 24,375,935 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03124,334,594 - 24,377,719 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03124,807,496 - 24,849,474 (+)NCBIUU_Cfam_GSD_1.0
Bach1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440497124,726,917 - 24,750,160 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650012,717,516 - 12,740,656 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650012,720,027 - 12,740,717 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BACH1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13192,656,289 - 192,697,540 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113192,656,289 - 192,697,536 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213203,110,429 - 203,149,469 (+)NCBISscrofa10.2Sscrofa10.2susScr3
BACH1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1262,674,834 - 63,028,825 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl262,877,986 - 62,925,465 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660715,462,068 - 5,510,099 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bach1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474517,321,460 - 17,340,463 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474517,321,379 - 17,343,911 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

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Variants in Bach1
255 total Variants

Predicted Target Of
Summary Value
Count of predictions:347
Count of miRNA genes:196
Interacting mature miRNAs:226
Transcripts:ENSRNOT00000002151
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 12 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)11169446234Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)111897620886241447Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)112295940367959403Rat
1598842Glom10Glomerulus QTL 103.4kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)11135331169Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)11104193166113562Rat
9589032Epfw10Epididymal fat weight QTL 109.290.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)112328045668280456Rat
9590313Scort20Serum corticosterone level QTL 206.510.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)112328045668280456Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)112328045668280456Rat
8694424Bw162Body weight QTL 1623.80.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)112328045668280456Rat
10755497Bp388Blood pressure QTL 3882.76arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)111945620576331918Rat

1 to 10 of 12 rows
RH143670  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81140,426,102 - 40,426,301 (+)Marker Load Pipeline
mRatBN7.21126,939,861 - 26,940,060 (+)MAPPERmRatBN7.2
Rnor_6.01127,513,399 - 27,513,597NCBIRnor6.0
Rnor_6.01127,365,577 - 27,365,775NCBIRnor6.0
Rnor_5.01130,990,078 - 30,990,276UniSTSRnor5.0
Rnor_5.01131,133,519 - 31,133,717UniSTSRnor5.0
RGSC_v3.41127,467,589 - 27,467,787UniSTSRGSC3.4
Celera1126,683,465 - 26,683,663UniSTS
RH 3.4 Map11136.3UniSTS
Cytogenetic Map11q11UniSTS
RH134801  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21126,957,085 - 26,957,265 (+)MAPPERmRatBN7.2
Rnor_6.01127,530,622 - 27,530,801NCBIRnor6.0
Rnor_6.01127,382,802 - 27,382,981NCBIRnor6.0
Rnor_5.01131,150,742 - 31,150,921UniSTSRnor5.0
Rnor_5.01131,007,303 - 31,007,482UniSTSRnor5.0
RGSC_v3.41127,484,813 - 27,484,992UniSTSRGSC3.4
Celera1126,700,688 - 26,700,867UniSTS
RH 3.4 Map11130.2UniSTS
Cytogenetic Map11q11UniSTS
Bach1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21126,960,896 - 26,961,146 (+)MAPPERmRatBN7.2
Rnor_6.01127,386,613 - 27,386,862NCBIRnor6.0
Rnor_5.01131,011,114 - 31,011,363UniSTSRnor5.0
RGSC_v3.41127,488,624 - 27,488,873UniSTSRGSC3.4
Celera1126,704,499 - 26,704,748UniSTS
Cytogenetic Map11q11UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000002151   ⟹   ENSRNOP00000002151
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1126,939,480 - 26,972,447 (+)Ensembl
Rnor_6.0 Ensembl1127,364,916 - 27,398,527 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000083275   ⟹   ENSRNOP00000071976
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1127,382,049 - 27,398,842 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000087021
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1127,598,719 - 27,611,811 (+)Ensembl
RefSeq Acc Id: NM_001107113   ⟹   NP_001100583
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81140,425,721 - 40,458,689 (+)NCBI
mRatBN7.21126,939,480 - 26,972,447 (+)NCBI
Rnor_6.01127,365,195 - 27,398,527 (+)NCBI
Rnor_5.01131,133,137 - 31,153,652 (+)NCBI
Rnor_5.01131,219,581 - 31,228,721 (+)NCBI
RGSC_v3.41127,467,207 - 27,500,173 (+)RGD
Celera1126,683,083 - 26,716,048 (+)RGD
Sequence:
RefSeq Acc Id: XM_017598018   ⟹   XP_017453507
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81140,426,820 - 40,461,118 (+)NCBI
mRatBN7.21126,940,738 - 26,974,876 (+)NCBI
Rnor_6.01127,366,453 - 27,398,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039088437   ⟹   XP_038944365
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81140,426,820 - 40,461,118 (+)NCBI
mRatBN7.21126,940,518 - 26,974,876 (+)NCBI
RefSeq Acc Id: XM_063270599   ⟹   XP_063126669
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81140,426,820 - 40,456,132 (+)NCBI
1 to 9 of 9 rows
Protein RefSeqs NP_001100583 (Get FASTA)   NCBI Sequence Viewer  
  XP_017453507 (Get FASTA)   NCBI Sequence Viewer  
  XP_038944365 (Get FASTA)   NCBI Sequence Viewer  
  XP_063126669 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM10645 (Get FASTA)   NCBI Sequence Viewer  
  EDM10646 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000002151
  ENSRNOP00000002151.4
  ENSRNOP00000111087
1 to 9 of 9 rows
RefSeq Acc Id: NP_001100583   ⟸   NM_001107113
- UniProtKB: D4ACD2 (UniProtKB/TrEMBL),   A6JL80 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017453507   ⟸   XM_017598018
- Peptide Label: isoform X1
- UniProtKB: D4ACD2 (UniProtKB/TrEMBL),   A6JL80 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000002151   ⟸   ENSRNOT00000002151
Ensembl Acc Id: ENSRNOP00000071976   ⟸   ENSRNOT00000083275
RefSeq Acc Id: XP_038944365   ⟸   XM_039088437
- Peptide Label: isoform X1
- UniProtKB: D4ACD2 (UniProtKB/TrEMBL),   A6JL80 (UniProtKB/TrEMBL)
BTB   bZIP

Name Modeler Protein Id AA Range Protein Structure
AF-D4ACD2-F1-model_v2 AlphaFold D4ACD2 1-739 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 35 of 35 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-22038 BioCyc
Ensembl Genes ENSRNOG00000001582 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00000059467 Ensembl
Ensembl Transcript ENSRNOT00000002151 ENTREZGENE
  ENSRNOT00000002151.7 UniProtKB/TrEMBL
  ENSRNOT00000145700 ENTREZGENE
Gene3D-CATH Potassium Channel Kv1.1, Chain A UniProtKB/TrEMBL
  Transcription factor, Skn-1-like, DNA-binding domain UniProtKB/TrEMBL
InterPro BTB/POZ-like UniProtKB/TrEMBL
  BTB/POZ_fold UniProtKB/TrEMBL
  bZIP_BACH UniProtKB/TrEMBL
  bZIP_Maf UniProtKB/TrEMBL
  bZIP_sf UniProtKB/TrEMBL
  Euk_TF_DNA-bd UniProtKB/TrEMBL
  TF_bZIP UniProtKB/TrEMBL
  ZnFinger_BTB_dom_contain UniProtKB/TrEMBL
KEGG Report rno:304127 UniProtKB/TrEMBL
NCBI Gene 304127 ENTREZGENE
PANTHER AGAP004733-PA UniProtKB/TrEMBL
  TRANSCRIPTION REGULATOR PROTEIN BACH1 UniProtKB/TrEMBL
Pfam BTB UniProtKB/TrEMBL
  bZIP_Maf UniProtKB/TrEMBL
PhenoGen Bach1 PhenoGen
PROSITE BTB UniProtKB/TrEMBL
  BZIP UniProtKB/TrEMBL
  BZIP_BASIC UniProtKB/TrEMBL
RatGTEx ENSRNOG00000001582 RatGTEx
  ENSRNOG00000059467 RatGTEx
SMART BRLZ UniProtKB/TrEMBL
  BTB UniProtKB/TrEMBL
Superfamily-SCOP BTB/POZ_fold UniProtKB/TrEMBL
  Euk_transcr_DNA UniProtKB/TrEMBL
  SSF57959 UniProtKB/TrEMBL
UniProt A6JL80 ENTREZGENE, UniProtKB/TrEMBL
  D4ACD2 ENTREZGENE, UniProtKB/TrEMBL
1 to 35 of 35 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Bach1  BTB domain and CNC homolog 1  LOC103690154  transcription regulator protein BACH1-like  Data merged from RGD:9077397 737654 PROVISIONAL
2016-05-11 Bach1  BTB domain and CNC homolog 1  Bach1  BTB and CNC homology 1, basic leucine zipper transcription factor 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2015-06-22 Bach1  BTB and CNC homology 1, basic leucine zipper transcription factor 1  LOC100911490  transcription regulator protein BACH1-like  Data merged from RGD:6492873 737654 APPROVED
2014-08-25 LOC103690154  transcription regulator protein BACH1-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2012-07-05 LOC100911490  transcription regulator protein BACH1-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-09-25 Bach1  BTB and CNC homology 1, basic leucine zipper transcription factor 1  Bach1  BTB and CNC homology 1   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Bach1  BTB and CNC homology 1   Bach1_predicted  BTB and CNC homology 1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Bach1_predicted  BTB and CNC homology 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED