Symbol:
Josd1
Name:
Josephin domain containing 1
RGD ID:
1305388
Description:
Predicted to enable cysteine-type deubiquitinase activity. Predicted to be involved in protein deubiquitination and proteolysis. Predicted to be located in cytoplasm and plasma membrane. Orthologous to human JOSD1 (Josephin domain containing 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; bisphenol A.
Type:
protein-coding
RefSeq Status:
PROVISIONAL
Previously known as:
josephin domain-containing protein 1; Josephin-1; LOC315134; MGC109161; RGD1305388; similar to RIKEN cDNA 1300006C06
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
JOSD1 (Josephin domain containing 1)
HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):
Josd1 (Josephin domain containing 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Josd1 (Josephin domain containing 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
JOSD1 (Josephin domain containing 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
JOSD1 (Josephin domain containing 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Josd1 (Josephin domain containing 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
JOSD1 (Josephin domain containing 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
JOSD1 (Josephin domain containing 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Josd1 (Josephin domain containing 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Mus musculus (house mouse):
Josd1 (Josephin domain containing 1)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Homo sapiens (human):
JOSD1 (Josephin domain containing 1)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
josd1 (Josephin domain containing 1)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Caenorhabditis elegans (roundworm):
josd-1
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Drosophila melanogaster (fruit fly):
CG3781
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
josd1
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 7 113,110,709 - 113,124,632 (-) NCBI GRCr8 mRatBN7.2 7 111,230,318 - 111,244,241 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 7 111,230,318 - 111,244,652 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 7 112,978,047 - 112,992,117 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 7 115,201,588 - 115,215,658 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 7 115,170,963 - 115,185,017 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 7 120,905,343 - 120,919,261 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 7 120,905,337 - 120,919,261 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 7 120,895,714 - 120,910,124 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 7 117,916,620 - 117,930,155 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 7 117,950,851 - 117,964,385 (-) NCBI Celera 7 107,560,792 - 107,574,577 (-) NCBI Celera Cytogenetic Map 7 q34 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Josd1 Rat (+)-catechin multiple interactions ISO JOSD1 (Homo sapiens) 6480464 [Catechin co-treated with Grape Seed Proanthocyanidins] results in decreased expression of JOSD1 mRNA CTD PMID:24763279 Josd1 Rat 1,2-dimethylhydrazine multiple interactions ISO Josd1 (Mus musculus) 6480464 [1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in increased expression of JOSD1 mRNA CTD PMID:22206623 Josd1 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO Josd1 (Mus musculus) 6480464 Tetrachlorodibenzodioxin affects the expression of JOSD1 mRNA CTD PMID:18343893 and PMID:21570461 Josd1 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of JOSD1 mRNA CTD PMID:33387578 Josd1 Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression ISO Josd1 (Mus musculus) 6480464 Tetrachlorodibenzodioxin results in increased expression of JOSD1 mRNA CTD PMID:15328365 more ... Josd1 Rat 2,3,7,8-tetrachlorodibenzodioxine multiple interactions ISO Josd1 (Mus musculus) 6480464 [Tetrachlorodibenzodioxin binds to AHR protein] which results in increased expression of JOSD1 mRNA and [TIPARP gene mutant form results in increased susceptibility to Tetrachlorodibenzodioxin] which results in increased expression of JOSD1 mRNA CTD PMID:16214954 and PMID:25975270 Josd1 Rat 2,3,7,8-Tetrachlorodibenzofuran affects expression ISO Josd1 (Mus musculus) 6480464 2 more ... CTD PMID:18343893 Josd1 Rat 2,4-dinitrotoluene affects expression EXP 6480464 2 and 4-dinitrotoluene affects the expression of JOSD1 mRNA CTD PMID:21346803 Josd1 Rat 2-butoxyethanol increases expression ISO Josd1 (Mus musculus) 6480464 n-butoxyethanol results in increased expression of JOSD1 mRNA CTD PMID:19812364 Josd1 Rat 3,3',4,4',5-pentachlorobiphenyl increases expression ISO Josd1 (Mus musculus) 6480464 3 more ... CTD PMID:23994337 Josd1 Rat acrylamide increases expression ISO JOSD1 (Homo sapiens) 6480464 Acrylamide results in increased expression of JOSD1 mRNA CTD PMID:32763439 Josd1 Rat all-trans-retinoic acid decreases expression ISO JOSD1 (Homo sapiens) 6480464 Tretinoin results in decreased expression of JOSD1 mRNA CTD PMID:33167477 Josd1 Rat aristolochic acid A increases expression ISO JOSD1 (Homo sapiens) 6480464 aristolochic acid I results in increased expression of JOSD1 mRNA CTD PMID:33212167 Josd1 Rat arsane affects methylation ISO JOSD1 (Homo sapiens) 6480464 Arsenic affects the methylation of JOSD1 gene CTD PMID:25304211 Josd1 Rat arsenic atom affects methylation ISO JOSD1 (Homo sapiens) 6480464 Arsenic affects the methylation of JOSD1 gene CTD PMID:25304211 Josd1 Rat benzene increases expression ISO JOSD1 (Homo sapiens) 6480464 Benzene results in increased expression of JOSD1 mRNA CTD PMID:19162166 Josd1 Rat benzo[a]pyrene decreases methylation ISO JOSD1 (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased methylation of JOSD1 promoter CTD PMID:27901495 Josd1 Rat beta-lapachone increases expression ISO JOSD1 (Homo sapiens) 6480464 beta-lapachone results in increased expression of JOSD1 mRNA CTD PMID:38218311 Josd1 Rat beta-naphthoflavone increases expression ISO Josd1 (Mus musculus) 6480464 beta-Naphthoflavone results in increased expression of JOSD1 mRNA CTD PMID:23994337 Josd1 Rat bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of JOSD1 mRNA CTD PMID:25181051 more ... Josd1 Rat bisphenol A affects expression ISO JOSD1 (Homo sapiens) 6480464 bisphenol A affects the expression of JOSD1 mRNA CTD PMID:30903817 Josd1 Rat caffeine increases phosphorylation ISO JOSD1 (Homo sapiens) 6480464 Caffeine results in increased phosphorylation of JOSD1 protein CTD PMID:35688186 Josd1 Rat CGP 52608 multiple interactions ISO JOSD1 (Homo sapiens) 6480464 CGP 52608 promotes the reaction [RORA protein binds to JOSD1 gene] CTD PMID:28238834 Josd1 Rat cisplatin increases expression ISO JOSD1 (Homo sapiens) 6480464 Cisplatin results in increased expression of JOSD1 mRNA CTD PMID:27594783 Josd1 Rat cyclosporin A increases expression ISO JOSD1 (Homo sapiens) 6480464 Cyclosporine results in increased expression of JOSD1 mRNA CTD PMID:20106945 more ... Josd1 Rat Dibutyl phosphate affects expression ISO JOSD1 (Homo sapiens) 6480464 di-n-butylphosphoric acid affects the expression of JOSD1 mRNA CTD PMID:37042841 Josd1 Rat dibutyl phthalate increases expression ISO Josd1 (Mus musculus) 6480464 Dibutyl Phthalate results in increased expression of JOSD1 mRNA CTD PMID:21266533 Josd1 Rat diuron increases expression EXP 6480464 Diuron results in increased expression of JOSD1 mRNA CTD PMID:21551480 Josd1 Rat finasteride increases expression EXP 6480464 Finasteride results in increased expression of JOSD1 mRNA CTD PMID:24136188 Josd1 Rat flutamide increases expression EXP 6480464 Flutamide results in increased expression of JOSD1 mRNA CTD PMID:24136188 Josd1 Rat folic acid multiple interactions ISO Josd1 (Mus musculus) 6480464 [1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in increased expression of JOSD1 mRNA CTD PMID:22206623 Josd1 Rat FR900359 increases phosphorylation ISO JOSD1 (Homo sapiens) 6480464 FR900359 results in increased phosphorylation of JOSD1 protein CTD PMID:37730182 Josd1 Rat leflunomide increases expression EXP 6480464 leflunomide results in increased expression of JOSD1 mRNA CTD PMID:24136188 Josd1 Rat methyl methanesulfonate increases expression ISO JOSD1 (Homo sapiens) 6480464 Methyl Methanesulfonate results in increased expression of JOSD1 mRNA CTD PMID:23649840 Josd1 Rat nefazodone increases expression EXP 6480464 nefazodone results in increased expression of JOSD1 mRNA CTD PMID:24136188 Josd1 Rat nickel atom increases expression ISO JOSD1 (Homo sapiens) 6480464 Nickel results in increased expression of JOSD1 mRNA CTD PMID:23195993 Josd1 Rat paracetamol increases expression ISO JOSD1 (Homo sapiens) 6480464 Acetaminophen results in increased expression of JOSD1 mRNA CTD PMID:29067470 Josd1 Rat pirinixic acid increases expression ISO Josd1 (Mus musculus) 6480464 pirinixic acid results in increased expression of JOSD1 mRNA CTD PMID:18301758 Josd1 Rat sodium arsenite increases expression ISO JOSD1 (Homo sapiens) 6480464 sodium arsenite results in increased expression of JOSD1 mRNA CTD PMID:38568856 Josd1 Rat sulindac decreases expression EXP 6480464 Sulindac results in decreased expression of JOSD1 mRNA CTD PMID:24136188 Josd1 Rat sunitinib increases expression ISO JOSD1 (Homo sapiens) 6480464 Sunitinib results in increased expression of JOSD1 mRNA CTD PMID:31533062 Josd1 Rat tetrachloroethene increases expression ISO Josd1 (Mus musculus) 6480464 Tetrachloroethylene results in increased expression of JOSD1 mRNA CTD PMID:28973375 Josd1 Rat thiram increases expression ISO JOSD1 (Homo sapiens) 6480464 Thiram results in increased expression of JOSD1 mRNA CTD PMID:38568856 Josd1 Rat titanium dioxide increases methylation ISO Josd1 (Mus musculus) 6480464 titanium dioxide results in increased methylation of JOSD1 gene CTD PMID:35295148 Josd1 Rat valproic acid increases expression ISO JOSD1 (Homo sapiens) 6480464 Valproic Acid results in increased expression of JOSD1 mRNA CTD PMID:29154799 Josd1 Rat valproic acid affects expression ISO JOSD1 (Homo sapiens) 6480464 Valproic Acid affects the expression of JOSD1 mRNA CTD PMID:25979313 Josd1 Rat zinc atom multiple interactions ISO JOSD1 (Homo sapiens) 6480464 [PCI 5002 co-treated with Zinc] results in increased expression of JOSD1 mRNA CTD PMID:18593933 Josd1 Rat zinc(0) multiple interactions ISO JOSD1 (Homo sapiens) 6480464 [PCI 5002 co-treated with Zinc] results in increased expression of JOSD1 mRNA CTD PMID:18593933 Josd1 Rat zoledronic acid increases expression ISO JOSD1 (Homo sapiens) 6480464 zoledronic acid results in increased expression of JOSD1 mRNA CTD PMID:20977926
(+)-catechin (ISO) 1,2-dimethylhydrazine (ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2,3,7,8-Tetrachlorodibenzofuran (ISO) 2,4-dinitrotoluene (EXP) 2-butoxyethanol (ISO) 3,3',4,4',5-pentachlorobiphenyl (ISO) acrylamide (ISO) all-trans-retinoic acid (ISO) aristolochic acid A (ISO) arsane (ISO) arsenic atom (ISO) benzene (ISO) benzo[a]pyrene (ISO) beta-lapachone (ISO) beta-naphthoflavone (ISO) bisphenol A (EXP,ISO) caffeine (ISO) CGP 52608 (ISO) cisplatin (ISO) cyclosporin A (ISO) Dibutyl phosphate (ISO) dibutyl phthalate (ISO) diuron (EXP) finasteride (EXP) flutamide (EXP) folic acid (ISO) FR900359 (ISO) leflunomide (EXP) methyl methanesulfonate (ISO) nefazodone (EXP) nickel atom (ISO) paracetamol (ISO) pirinixic acid (ISO) sodium arsenite (ISO) sulindac (EXP) sunitinib (ISO) tetrachloroethene (ISO) thiram (ISO) titanium dioxide (ISO) valproic acid (ISO) zinc atom (ISO) zinc(0) (ISO) zoledronic acid (ISO)
Josd1 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 7 113,110,709 - 113,124,632 (-) NCBI GRCr8 mRatBN7.2 7 111,230,318 - 111,244,241 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 7 111,230,318 - 111,244,652 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 7 112,978,047 - 112,992,117 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 7 115,201,588 - 115,215,658 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 7 115,170,963 - 115,185,017 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 7 120,905,343 - 120,919,261 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 7 120,905,337 - 120,919,261 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 7 120,895,714 - 120,910,124 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 7 117,916,620 - 117,930,155 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 7 117,950,851 - 117,964,385 (-) NCBI Celera 7 107,560,792 - 107,574,577 (-) NCBI Celera Cytogenetic Map 7 q34 NCBI
JOSD1 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 22 38,685,543 - 38,701,403 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 22 38,685,543 - 38,701,556 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 22 39,081,548 - 39,097,408 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 22 37,411,572 - 37,426,215 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 22 22,888,225 - 22,903,135 (-) NCBI Celera Cytogenetic Map 22 q13.1 NCBI HuRef 22 22,047,762 - 22,062,462 (-) NCBI HuRef CHM1_1 22 39,040,444 - 39,055,356 (-) NCBI CHM1_1 T2T-CHM13v2.0 22 39,155,750 - 39,171,614 (-) NCBI T2T-CHM13v2.0
Josd1 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 15 79,558,451 - 79,572,073 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 15 79,558,452 - 79,572,120 (-) Ensembl GRCm39 Ensembl GRCm38 15 79,674,250 - 79,687,872 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 15 79,674,251 - 79,687,919 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 15 79,504,680 - 79,518,302 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 15 79,501,508 - 79,515,074 (-) NCBI MGSCv36 mm8 Celera 15 81,799,453 - 81,813,105 (-) NCBI Celera Cytogenetic Map 15 E1 NCBI cM Map 15 37.85 NCBI
Josd1 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955413 24,803,189 - 24,817,174 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955413 24,803,189 - 24,817,150 (-) NCBI ChiLan1.0 ChiLan1.0
JOSD1 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 23 48,541,257 - 48,556,977 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 22 51,232,622 - 51,248,317 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 22 19,600,557 - 19,616,314 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 22 37,418,282 - 37,433,250 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 22 37,418,283 - 37,433,250 (-) Ensembl panpan1.1 panPan2
JOSD1 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 10 26,103,874 - 26,115,728 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 10 26,104,898 - 26,113,733 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 10 26,059,477 - 26,071,249 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 10 26,894,867 - 26,906,845 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 10 26,894,729 - 26,906,826 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 10 26,616,551 - 26,628,511 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 10 26,927,729 - 26,939,629 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 10 27,104,538 - 27,116,518 (+) NCBI UU_Cfam_GSD_1.0
Josd1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404945 9,645,816 - 9,659,118 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936492 2,656,235 - 2,669,540 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936492 2,656,222 - 2,669,538 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
JOSD1 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 5 9,321,640 - 9,335,041 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 5 9,321,932 - 9,336,675 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 5 6,566,580 - 6,580,197 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
JOSD1 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 19 21,348,764 - 21,366,491 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 19 21,351,131 - 21,366,353 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666045 104,392,322 - 104,411,731 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Josd1 (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 325 Count of miRNA genes: 201 Interacting mature miRNAs: 252 Transcripts: ENSRNOT00000019612 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
1300179 Kidm5 Kidney mass QTL 5 3.51 kidney mass (VT:0002707) left kidney wet weight (CMO:0000083) 7 43747012 135012528 Rat 1300112 Bp183 Blood pressure QTL 183 3.51 arterial blood pressure trait (VT:2000000) blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) 7 111182207 135012528 Rat 1331728 Bp214 Blood pressure QTL 214 2.825 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 7 80221299 124373579 Rat 1331731 Bp216 Blood pressure QTL 216 2.851 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 7 102297359 133492884 Rat 2298475 Eau6 Experimental allergic uveoretinitis QTL 6 0.0029 uvea integrity trait (VT:0010551) experimental autoimmune uveitis score (CMO:0001504) 7 84257275 129257275 Rat 71114 Niddm14 Non-insulin dependent diabetes mellitus QTL 14 4.5 blood glucose amount (VT:0000188) plasma glucose level (CMO:0000042) 7 84257275 129257275 Rat 1357336 Gluco6 Glucose level QTL 6 3.4 blood glucose amount (VT:0000188) serum glucose level (CMO:0000543) 7 94811326 116294265 Rat 70159 Bp61 Blood pressure QTL 61 0.0001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 7 103146217 116738842 Rat 631687 Hcas1 Hepatocarcinoma susceptibility QTL 1 3.9 0.001 liver integrity trait (VT:0010547) liver tumorous lesion volume to total liver volume ratio (CMO:0001082) 7 91412594 129807172 Rat 1357338 Stl17 Serum triglyceride level QTL 17 3.23 blood triglyceride amount (VT:0002644) serum triglyceride level (CMO:0000360) 7 69736356 112729554 Rat 634331 Pia17 Pristane induced arthritis QTL 17 4.7 joint integrity trait (VT:0010548) arthritic paw count (CMO:0001460) 7 73829340 130221005 Rat 1358914 Bp266 Blood pressure QTL 266 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 7 83591953 134666232 Rat 631504 Cm27 Cardiac mass QTL 27 3.45 heart left ventricle mass (VT:0007031) heart left ventricle wet weight (CMO:0000071) 7 44421311 118198041 Rat 634322 Bw12 Body weight QTL 12 0 body mass (VT:0001259) body weight (CMO:0000012) 7 83153392 128153392 Rat 70173 Niddm19 Non-insulin dependent diabetes mellitus QTL 19 4.33 0.00005 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) 7 64002457 135012528 Rat 1549899 Stresp8 Stress response QTL 8 4.37 0.0008 stress-related behavior trait (VT:0010451) defensive burying duration (CMO:0001961) 7 90482196 135012528 Rat 2317052 Aia17 Adjuvant induced arthritis QTL 17 2.13 joint integrity trait (VT:0010548) left rear ankle joint diameter (CMO:0002149) 7 81737938 126737938 Rat 731176 Glom5 Glomerulus QTL 5 2.5 0.0035 kidney glomerulus morphology trait (VT:0005325) count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002) 7 96670164 135012528 Rat 631663 Bw6 Body weight QTL 6 3.4 body mass (VT:0001259) body weight (CMO:0000012) 7 111075573 134976056 Rat 2306821 Bp335 Blood pressure QTL 335 0.001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 7 106571501 135012528 Rat 7411607 Foco15 Food consumption QTL 15 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 7 75918751 120918751 Rat 1558655 Swd4 Spike wave discharge measurement QTL 4 3.68 0.0002 brain electrophysiology trait (VT:0010557) brain spike-and-wave discharge severity grade (CMO:0001988) 7 86983365 131983365 Rat 634336 Anxrr17 Anxiety related response QTL 17 3.66 locomotor behavior trait (VT:0001392) number of entries into a discrete space in an experimental apparatus (CMO:0000960) 7 924703 115097879 Rat 1331768 Kidm10 Kidney mass QTL 10 4.62096 kidney mass (VT:0002707) left kidney wet weight (CMO:0000083) 7 80221299 125221299 Rat 731174 Uae23 Urinary albumin excretion QTL 23 2.4 0.0042 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) 7 104603555 135012528 Rat 2313102 Bmd79 Bone mineral density QTL 79 2.3 0.0001 tibia mineral mass (VT:1000283) total volumetric bone mineral density (CMO:0001728) 7 94811085 116738842 Rat 61357 Bp38 Blood pressure QTL 38 1.6 0.052 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 7 41333674 119109060 Rat 2316947 Rf58 Renal function QTL 58 7.8 kidney glomerulus morphology trait (VT:0005325) index of glomerular damage (CMO:0001135) 7 68938720 113886318 Rat 1331746 Kidm9 Kidney mass QTL 9 3.934 kidney mass (VT:0002707) right kidney wet weight (CMO:0000082) 7 80221299 112308525 Rat 7411654 Foco25 Food consumption QTL 25 9.3 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 7 75918751 120918751 Rat 2299163 Iddm34 Insulin dependent diabetes mellitus QTL 34 2.71 blood glucose amount (VT:0000188) age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140) 7 91281130 135012528 Rat 2316955 Stl24 Serum triglyceride level QTL 24 7.1 blood triglyceride amount (VT:0002644) plasma triglyceride level (CMO:0000548) 7 68938720 113886318 Rat 2316952 Pur22 Proteinuria QTL 22 5.2 urine protein amount (VT:0005160) urine protein level (CMO:0000591) 7 68938720 113886318 Rat 631540 Bw9 Body weight QTL 9 4.5 body mass (VT:0001259) body weight (CMO:0000012) 7 69736226 117455174 Rat 1358891 Bp265 Blood pressure QTL 265 2.21 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 7 83591953 134666232 Rat
RH127912
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 7 111,230,535 - 111,230,731 (+) MAPPER mRatBN7.2 mRatBN7.2 X 88,876,083 - 88,876,279 (+) MAPPER mRatBN7.2 Rnor_6.0 X 95,708,276 - 95,708,471 NCBI Rnor6.0 Rnor_6.0 7 120,905,555 - 120,905,750 NCBI Rnor6.0 Rnor_5.0 7 120,895,926 - 120,896,121 UniSTS Rnor5.0 Rnor_5.0 X 95,584,229 - 95,584,424 UniSTS Rnor5.0 RGSC_v3.4 7 117,916,832 - 117,917,027 UniSTS RGSC3.4 RGSC_v3.4 X 112,777,567 - 112,777,762 UniSTS RGSC3.4 Celera X 90,030,168 - 90,030,363 UniSTS Celera 7 107,561,004 - 107,561,199 UniSTS RH 3.4 Map 7 843.91 UniSTS Cytogenetic Map 7 q34 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000019612 ⟹ ENSRNOP00000019612
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 7 111,230,318 - 111,244,652 (-) Ensembl Rnor_6.0 Ensembl 7 120,905,337 - 120,919,261 (-) Ensembl
RefSeq Acc Id:
NM_001025009 ⟹ NP_001020180
RefSeq Status:
PROVISIONAL
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 7 113,110,715 - 113,124,632 (-) NCBI mRatBN7.2 7 111,230,324 - 111,244,241 (-) NCBI Rnor_6.0 7 120,905,343 - 120,919,261 (-) NCBI Rnor_5.0 7 120,895,714 - 120,910,124 (-) NCBI RGSC_v3.4 7 117,916,620 - 117,930,155 (-) RGD Celera 7 107,560,792 - 107,574,577 (-) RGD
Sequence:
CGAGAAGACAGAAAAGGTAGACTGGTGGGTTGGGTTTTTTTGTCCCTTTTGGTTCCAACCTTTCCTCCCAGTGACAAAGCATAAATCATGGACACCAGAGAGTAGGTGAACCTCAGGAATCTGAAGAC AGAAACTTAGACTTTCCTCAGGAGGAAAGGAGCGGGGTGTTTATCGGCTCTGCCTGGAACCTAAATTGAAAAACATGAGTTGCATGCCATGGAAAGGAGACAAGGCCAAATCTGAATCCTTGGAGCTT CCCCAGGCAGCACCCCCACAAATCTACCATGAGAAGCAGCGCAGGGAGCTCTGTGCCCTTCATGCTCTCAACAACGTCTTCCAGGACAGCAACGCCTTCACGCGGGAAACGCTGCAGGAGATTTTCCA GAGGCTGTCTCCGAACACTGTGGTGACGCCCCACAAGAAGAGCATGCTGGGAAATGGGAATTATGATGTGAATGTCATCATGGCGGCCCTTCAAACAAAAGGATATGAAGCTGTTTGGTGGGACAAGC GCAGGGACGTGGGTGTTATTGCTCTTGCTAACGTCATGGGCTTCATCATGAACCTGCCCTCCAGCCTGTGCTGGGGTCCACTCAAGTTGCCTCTCAAAAGGCAGCACTGGATCTGTGTTCGTGAGGTG GGAGGGGCCTACTACAACCTTGACTCCAAACTCAAGATGCCAGAGTGGATTGGAGGCGAGAGTGAGCTCAGGAAATTTCTAAAATACCATTTGCGAGGTAAAAACTGTGAACTCCTACTGGTGGTACC AGAAGAAGTGGAAGCCCATCAGAGCTGGAGGGCCGACGTGTGACAGACAGTTCTGCCTGACCCTCTTTGCCTCAACCCTCCAGACCTCTTTGATGTGCTGTGGCCTCTACAGTTCACTTCCCCAAACA TCTCATTGGGTTTTCCCTTCAGATTGGCCAGTGCAATAGGACAGATATGTGGACTGTCAGAGCCACCCAGCAGTCTGTGCCTGGGGGAAGAAGGTAGGAGTTCTGAACACTTAGGGCAAGACATTGAA CACCCTTTGCTGTTTGAAAGAGGGAGCTGAAAAGGGAGTCATTTGAGGGGGCTTGGTTATTTTCTCCTTTCTATGAGGTCTTGACACAGGTTCTGCTGGTAGTGTTACTGATGCTTCAGGCTCACAGA GAGGCTGCCCCCTTTTTTCTCCTGTGGCACCATGGGGTCTGAGGACAAAGTACATGCAGAGCCCAGTGACCGGCTCAAAGGACCCAGAGCCAGGAAACTGTGTCTCAGGAAACTGTCACGAGTCCAGC AATGGCACTGCATGCCATCTGCAATCCATTATGCCACCTCTTAGCCCTTTTTAAATCCCAGCCAGCCTTGGAGTTTTATAACGAAAAGTTCTGATATTCCAAAGTAGGTAAATTGCACAGTATTCTAG CAAGACAATGGTGTAACGTATACCTAATACAATGTGGGTAAAACCACAGTAGGGCAGTCAATGGTGGCTCTTCACTCTAATTATGTCCCTACCATTTCACTACATTGACTAGGGAGGCTCTGGGGCAA AAGACAATGAGCAGGGATAGCACTTATAGTTGACCCATTTTAGCAAAATCAGAAACACATCTACCACTGACATCAAATTCCATAGTTTGGGACACAGCTGGGTGAGGAAACTGCCATGAAGGTAAGCT TCAGGGTTTGAGACTGGTAGGCACATCCTGAGCTCCAGGGCTGTGGCAGCAATCTCAGGTTGGTTGTATGCATCGAGCTGGAGCCTCTGGTTTTGGCGTCTGCTATAGTTTCTTTTACAAACAGGGTT GGCTCGCTCCACCTCAAGTAGTTCTAGACCATTTTTTTCTCCTATAATTTTGGAAAATGAGGAGAAATAAGTACCATACCCCCATACCAATGTGTTTGTGGTGGCCTTCAAGGCAGGTGACCTGGCCA GCCCTTATCAATCCATGGTCTCTGTAGGTCTGAGAGCTGCCCCACTGGCCTGCTTCTCCCTGGCAGCAGAGCTACCTGGGGCTTGCATGTTAATCCTGAGCAAGCTTGTTGGGGTGAAGCAGGGGCTG TCTCCCCACTGTGACTGGAGTGCATGTTTACACCAGCACTTTTTCTGCACATGTATCTTCAATCCAACAAGGCCGTTTTTTATTCAAGTAGCAGAGGCCTCAAGTGGCTACTGCATTGCGCTCAGCCA TGGTCATCTGCACCATTTTCTACACCAGATCTGCTTGGCACCACGGGGAGCTAACTCTGCCCCTGCACAATGACATTCCAATCACTACCAGCCAGAAGTTACAGCCGACCTTGCTGATTGTCACAAGC AGGACCTTGGTCCATTGGCACTGTCGGTGAGAGTAAGCCATTTCTTGGGAAGAGGAGACTCCTCCCTACAGATCTGCTTGGGCCTTTGCAAATGGCACTGCAAACAGTCCCACGCACGTGGAGCCCAT GAGCTGGTGGGATGTATAAAGATGCCTAAGCATTTCAGGGCTGGTTCTGTTCATATCCAATTCTGGTGCTTAGGAACAGGGACCCATGTTGATGCCCAAGGGCAAAAAGCCCCATTCCTATTAAGGGG CATCCTGACCCTGATGCCCAGCAAGGGCAACCCTAGGCTTTGTTTTTCTTGCTTTATTCCCTTTCTTTGTTGGCCTTGTGCTGGGTTTGTTTACAAAGATGTATTTTGTTTAACCAAATATTAAAAAT GAGAAGCTGAAAAAAAAAAAAAAAAAAAAAAAAAAA
hide sequence
RefSeq Acc Id:
XM_039079268 ⟹ XP_038935196
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 7 113,110,709 - 113,124,430 (-) NCBI mRatBN7.2 7 111,230,318 - 111,244,071 (-) NCBI
RefSeq Acc Id:
NP_001020180 ⟸ NM_001025009
- UniProtKB:
Q5BJY4 (UniProtKB/Swiss-Prot), A6HST3 (UniProtKB/TrEMBL)
- Sequence:
MSCMPWKGDKAKSESLELPQAAPPQIYHEKQRRELCALHALNNVFQDSNAFTRETLQEIFQRLSPNTVVTPHKKSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGVIALANVMGFIMNLPSSLCW GPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKYHLRGKNCELLLVVPEEVEAHQSWRADV
hide sequence
Ensembl Acc Id:
ENSRNOP00000019612 ⟸ ENSRNOT00000019612
RefSeq Acc Id:
XP_038935196 ⟸ XM_039079268
- Peptide Label:
isoform X1
BioCyc Gene
G2FUF-32752
BioCyc
Ensembl Genes
ENSRNOG00000014440
Ensembl, UniProtKB/Swiss-Prot
ENSRNOG00055032500
UniProtKB/Swiss-Prot
ENSRNOG00060029613
UniProtKB/Swiss-Prot
ENSRNOG00065032945
UniProtKB/Swiss-Prot
Ensembl Transcript
ENSRNOT00000019612.7
UniProtKB/Swiss-Prot
ENSRNOT00055056146
UniProtKB/Swiss-Prot
ENSRNOT00060051431
UniProtKB/Swiss-Prot
ENSRNOT00065056676
UniProtKB/Swiss-Prot
Gene3D-CATH
3.90.70.40
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE
IMAGE:7384518
IMAGE-MGC_LOAD
InterPro
JOSD1/2
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Josephin
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report
rno:315134
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE
MGC:109161
IMAGE-MGC_LOAD
NCBI Gene
315134
ENTREZGENE
PANTHER
JOSEPHIN 1, 2
UniProtKB/TrEMBL
JOSEPHIN-1
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PTHR13291
UniProtKB/Swiss-Prot
Pfam
Josephin
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen
Josd1
PhenoGen
PROSITE
JOSEPHIN
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx
ENSRNOG00000014440
RatGTEx
ENSRNOG00055032500
RatGTEx
ENSRNOG00060029613
RatGTEx
ENSRNOG00065032945
RatGTEx
SMART
Josephin
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt
A6HST3
ENTREZGENE, UniProtKB/TrEMBL
JOS1_RAT
UniProtKB/Swiss-Prot, ENTREZGENE
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2006-03-30
Josd1
Josephin domain containing 1
RGD1305388
similar to RIKEN cDNA 1300006C06
Symbol and Name updated
1299863
APPROVED
2005-12-06
RGD1305388
similar to RIKEN cDNA 1300006C06
RGD1305388_predicted
similar to RIKEN cDNA 1300006C06 (predicted)
Symbol and Name updated
1559027
APPROVED
2005-01-20
RGD1305388_predicted
similar to RIKEN cDNA 1300006C06 (predicted)
LOC315134_predicted
Symbol and Name status set to approved
1331353
APPROVED
2005-01-12
LOC315134_predicted
similar to RIKEN cDNA 1300006C06 (predicted)
Symbol and Name status set to provisional
70820
PROVISIONAL