Registry SPIKE Map
SPIKE (Signaling Pathways Integrated Knowledge Engine) is a repository that can store, organise and allow retrieval of pathway information in a way that will be useful for the research community. The database currently focuses primarily on pathways describing DNA damage response, cell cycle, programmed cell death and hearing related pathways. Pathways are regularly updated, and additional pathways are gradually added. The complete database and the individual maps are freely exportable in several formats. This collection references pathway maps.
- Prefix
spike.map- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in SPIKE Map should match this regular expression:
^spike\d{5}$ - Example Local Unique Identifier
- spike00001 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from SPIKE Map should match this regular expression:
^spike\.map:spike\d{5}$ - Example CURIE
- spike.map:spike00001
Metaregistry SPIKE Map
The metaregistry provides mappings between the Bioregistry and other registries. There are
3 mappings to external registries for spike.map.
| Registry Name | Metaprefix | External Prefix |
|---|---|---|
| BioContext | biocontext |
SPIKE.MAP
|
Identifiers.org
|
miriam |
spike.map
|
Name-to-Thing
|
n2t |
spike.map
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
spike.map:
is used to demonstrate the provides available for
spike.map. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
| Name | Metaprefix | URI |
|---|---|---|
| SPIKE Map | spike.map |
http://www.cs.tau.ac.il/~spike/maps/spike00001.html |
| Bioregistry | bioregistry |
https://bioregistry.io/spike.map:spike00001 |
| Identifiers.org | miriam |
https://identifiers.org/spike.map:spike00001 |
| Name-to-Thing | n2t |
https://n2t.net/spike.map:spike00001 |