SPIKE (Signaling Pathways Integrated Knowledge Engine) is a repository that can store, organise and allow retrieval of pathway information in a way that will be useful for the research community. The database currently focuses primarily on pathways describing DNA damage response, cell cycle, programmed cell death and hearing related pathways. Pathways are regularly updated, and additional pathways are gradually added. The complete database and the individual maps are freely exportable in several formats. This collection references pathway maps.

Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in SPIKE Map should match this regular expression:

Example Local Unique Identifier
spike00001   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from SPIKE Map should match this regular expression:

Example CURIE
Metaregistry SPIKE Map

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for spike.map.

Registry Name Metaprefix External Prefix
BioContext biocontext SPIKE.MAP
Identifiers.org Identifiers.org logo miriam spike.map
Name-to-Thing Name-to-Thing logo n2t spike.map

Providers are various services that resolve CURIEs to URLs. The example CURIE spike.map: is used to demonstrate the provides available for spike.map. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
SPIKE Map spike.map http://www.cs.tau.ac.il/~spike/maps/spike00001.html
Bioregistry bioregistry https://bioregistry.io/spike.map:spike00001
Identifiers.org miriam https://identifiers.org/spike.map:spike00001
Name-to-Thing n2t https://n2t.net/spike.map:spike00001