The secondary metabolism collaboratory is a database for secondary metabolite biosynthetic gene clusters. This prefix represents identifiers for bacteria and archaea sources linked to their associated set of biosynthetic gene clusters (BGCs).

Prefix
smc.source
Links
Homepage Request Discussion
Contact
Daniel W Udwary   0000-0002-3491-0198
Pattern for Local Unique Identifiers

Local identifiers in Secondary Metabolism Collaboratory should match this regular expression:
^\d+$

Example Local Unique Identifier
1   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Secondary Metabolism Collaboratory should match this regular expression:
^smc\.source:\d+$

Example CURIE
smc.source:1
Publications
2024 The secondary metabolism collaboratory: a database and web discussion portal for secondary metabolite biosynthetic gene clusters
Contributors
Reviewer
Benjamin M. Gyori   0000-0001-9439-5346   bgyori
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 1 is used to demonstrate the providers available for Secondary Metabolism Collaboratory. A guide for curating additional providers can be found here.

Name Metaprefix URI
Secondary Metabolism Collaboratory smc.source https://smc.jgi.doe.gov/sources/1
Bioregistry bioregistry https://bioregistry.io/smc.source:1