The secondary metabolism collaboratory is a database for secondary metabolite biosynthetic gene clusters. This prefix represents identifiers for individual biosynthetic gene clusters (BGCs) linked to their corresponding bacterial or archaeal source.

Prefix
smc.bgc
Links
Homepage Request Discussion
Contact
Daniel W Udwary   0000-0002-3491-0198
Pattern for Local Unique Identifiers

Local identifiers in Secondary Metabolism Collaboratory should match this regular expression:
^\d+$

Example Local Unique Identifier
12039302   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Secondary Metabolism Collaboratory should match this regular expression:
^smc\.bgc:\d+$

Example CURIE
smc.bgc:12039302
Publications
2024 The secondary metabolism collaboratory: a database and web discussion portal for secondary metabolite biosynthetic gene clusters
Contributors
Reviewer
Benjamin M. Gyori   0000-0001-9439-5346   bgyori
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 12039302 is used to demonstrate the providers available for Secondary Metabolism Collaboratory. A guide for curating additional providers can be found here.

Name Metaprefix URI
Secondary Metabolism Collaboratory smc.bgc https://smc.jgi.doe.gov/bgc/12039302
Bioregistry bioregistry https://bioregistry.io/smc.bgc:12039302