Phytozome is a project to facilitate comparative genomic studies amongst green plants. Famlies of orthologous and paralogous genes that represent the modern descendents of ancestral gene sets are constructed at key phylogenetic nodes. These families allow easy access to clade specific orthology/paralogy relationships as well as clade specific genes and gene expansions. This collection references locus information.

Alternative Prefixes
JGI Phytozome
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Plant Genome Network should match this regular expression:

Example Local Unique Identifier
Glyma0021s00410   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Plant Genome Network should match this regular expression:

Example CURIE
Metaregistry Plant Genome Network

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext PHYTOZOME.LOCUS logo miriam
Name-to-Thing Name-to-Thing logo n2t
National Center for Biotechnology Information Registry ncbi Phytozome

Providers are various services that resolve CURIEs to URLs. The example CURIE is used to demonstrate the provides available for Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Plant Genome Network
Bioregistry bioregistry miriam
Name-to-Thing n2t