Phytozome is a project to facilitate comparative genomic studies amongst green plants. Famlies of orthologous and paralogous genes that represent the modern descendents of ancestral gene sets are constructed at key phylogenetic nodes. These families allow easy access to clade specific orthology/paralogy relationships as well as clade specific genes and gene expansions. This collection references locus information.

Prefix
phytozome.locus
Alternative Prefixes
JGI Phytozome
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Plant Genome Network should match this regular expression:
^[A-Za-z0-9]+$

Example Local Unique Identifier
Glyma0021s00410   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Plant Genome Network should match this regular expression:
^phytozome.locus:[A-Za-z0-9]+$

Example CURIE
phytozome.locus:Glyma0021s00410
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for phytozome.locus.

Registry Name Metaprefix External Prefix
Identifiers.org miriam phytozome.locus
Name-to-Thing n2t phytozome.locus
National Center for Biotechnology Information Registry ncbi Phytozome
Prefix Commons prefixcommons PHYTOZOME.LOCUS
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE phytozome.locus:Glyma0021s00410 is used to demonstrate the provides available for phytozome.locus. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Plant Genome Network phytozome.locus http://www.phytozome.net/genePage.php?crown&method=0&search=1&detail=1&searchText=locusname:Glyma0021s00410
Bioregistry bioregistry https://bioregistry.io/phytozome.locus:Glyma0021s00410
Identifiers.org miriam https://identifiers.org/phytozome.locus:Glyma0021s00410
Name-to-Thing n2t https://n2t.net/phytozome.locus:Glyma0021s00410