Phytozome is a project to facilitate comparative genomic studies amongst green plants. Famlies of orthologous and paralogous genes that represent the modern descendents of ancestral gene sets are constructed at key phylogenetic nodes. These families allow easy access to clade specific orthology/paralogy relationships as well as clade specific genes and gene expansions. This collection references locus information.
phytozome.locus
Local identifiers in Plant Genome Network should match this
regular expression:
^[A-Za-z0-9]+$
Compact URIs (CURIEs) constructed from Plant Genome Network should match
this regular expression:
^phytozome\.locus:[A-Za-z0-9]+$
The metaregistry provides mappings between the Bioregistry and other registries. There are
4 mappings to external registries for phytozome.locus
with
2 unique external prefixes.
Registry Name | Metaprefix | External Prefix |
---|---|---|
BioContext | biocontext |
PHYTOZOME.LOCUS
|
Identifiers.org
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miriam |
phytozome.locus
|
Name-to-Thing
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n2t |
phytozome.locus
|
National Center for Biotechnology Information Registry | ncbi |
Phytozome
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
phytozome.locus:
is used to demonstrate the provides available for
phytozome.locus
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.