Phytozome is a project to facilitate comparative genomic studies amongst green plants. Famlies of orthologous and paralogous genes that represent the modern descendents of ancestral gene sets are constructed at key phylogenetic nodes. These families allow easy access to clade specific orthology/paralogy relationships as well as clade specific genes and gene expansions. This collection references locus information.

Alternative Prefixes
JGI Phytozome
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Plant Genome Network should match this regular expression:

Example Local Unique Identifier
Glyma0021s00410   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Plant Genome Network should match this regular expression:

Example CURIE

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for

Registry Name Metaprefix External Prefix miriam
Name-to-Thing n2t
National Center for Biotechnology Information Registry ncbi Phytozome
Prefix Commons prefixcommons PHYTOZOME.LOCUS

Providers are various services that resolve CURIEs to URLs. The example CURIE is used to demonstrate the provides available for Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Plant Genome Network
Bioregistry bioregistry miriam
Name-to-Thing n2t