The Protein Data Bank is the single worldwide archive of structural data of biological macromolecules. This collection references ligands.
pdb.ligand
Local identifiers in Protein Data Bank Ligand should match this
regular expression:
^[A-Za-z0-9]+$
Compact URIs (CURIEs) constructed from Protein Data Bank Ligand should match
this regular expression:
^pdb\.ligand:[A-Za-z0-9]+$
The metaregistry provides mappings between the Bioregistry and other registries. There are
4 mappings to external registries for pdb.ligand
.
Registry Name | Metaprefix | External Prefix |
---|---|---|
Identifiers.org
![]() |
miriam |
pdb.ligand
|
Name-to-Thing
![]() |
n2t |
pdb.ligand
|
Prefix Commons | prefixcommons |
PDB.LIGAND
|
Wikidata Property
|
wikidata |
P3636
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
pdb.ligand:TRQ
is used to demonstrate the provides available for
pdb.ligand
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
Protein Data Bank Ligand | pdb.ligand |
http://www.rcsb.org/pdb/ligand/ligandsummary.do?hetId=TRQ |
Bioregistry | bioregistry |
https://bioregistry.io/pdb.ligand:TRQ |
Identifiers.org | miriam |
https://identifiers.org/pdb.ligand:TRQ |
Name-to-Thing | n2t |
https://n2t.net/pdb.ligand:TRQ |
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
CURATOR_REVIEW | PDB Ligand at Protein Databank in Europe (PDBe) | https://www.ebi.ac.uk/pdbe-srv/pdbechem/chemicalCompound/show/TRQ |