The PANTHER (Protein ANalysis THrough Evolutionary Relationships) Classification System is a resource that classifies genes by their functions, using published scientific experimental evidence and evolutionary relationships to predict function even in the absence of direct experimental evidence. This collection references groups of genes that have been organised as families.

Prefix

panther.family

Keywords

classification gene ontology pathway protein

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in PANTHER Family should match this regular expression:
^PTHR\d{5}(\:SF\d{1,3})?$

Example Local Unique Identifier

PTHR12345   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from PANTHER Family should match this regular expression:
^panther\.family:PTHR\d{5}(\:SF\d{1,3})?$

Example CURIE

panther.family:PTHR12345

Publications

• 2019 PANTHER version 14: more genomes, a new PANTHER GO-slim and improvements in enrichment analysis tools.
• 2003 PANTHER: a library of protein families and subfamilies indexed by function.

Part Of (bfo:0000050 )

panther (not directly registered)

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for panther.family with 3 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE panther.family:PTHR12345 is used to demonstrate the provides available for panther.family. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.