Registry Protein ANalysis THrough Evolutionary Relationships Classification System

The PANTHER (Protein ANalysis THrough Evolutionary Relationships) Classification System is a resource that classifies genes by their functions, using published scientific experimental evidence and evolutionary relationships to predict function even in the absence of direct experimental evidence. This collection references groups of genes that have been organised as families.

Prefix
panther.family
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Protein ANalysis THrough Evolutionary Relationships Classification System should match this regular expression:
^PTHR\d{5}(\:SF\d{1,3})?$

Example Local Unique Identifier
PTHR12345   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Protein ANalysis THrough Evolutionary Relationships Classification System should match this regular expression:
^panther.family:PTHR\d{5}(\:SF\d{1,3})?$

Example CURIE
panther.family:PTHR12345
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for panther.family.

Registry Name Metaprefix External Prefix
Biolink Model Registry biolink PANTHER.FAMILY
Gene Ontology Registry go PANTHER
Identifiers.org miriam panther.family
Name-to-Thing n2t panther.family
Prefix Commons prefixcommons PANTHER.FAMILY
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE panther.family:PTHR12345 is used to demonstrate the provides available for panther.family. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Protein ANalysis THrough Evolutionary Relationships Classification System panther.family http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12345
Bioregistry bioregistry https://bioregistry.io/panther.family:PTHR12345
Identifiers.org miriam https://identifiers.org/panther.family:PTHR12345
Name-to-Thing n2t https://n2t.net/panther.family:PTHR12345