NONCODE is a database of expression and functional lncRNA (long noncoding RNA) data obtained from microarray studies. LncRNAs have been shown to play key roles in various biological processes such as imprinting control, circuitry controlling pluripotency and differentiation, immune responses and chromosome dynamics. The collection references NONCODE version 4 and relates to gene regions.
- Prefix
noncodev4.gene- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in NONCODE v4 Gene should match this regular expression:
^NONHSAG\d{5}$ - Example Local Unique Identifier
- NONHSAG00001 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from NONCODE v4 Gene should match this regular expression:
^noncodev4\.gene:NONHSAG\d{5}$ - Example CURIE
- noncodev4.gene:NONHSAG00001
Metaregistry NONCODE v4 Gene
The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
NONCODEV4.GENE
|
|
Identifiers.org
|
miriam |
noncodev4.gene
|
|
N2T
|
n2t |
noncodev4.gene
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier NONHSAG00001 is used to demonstrate the providers
available for NONCODE v4 Gene. A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| NONCODE v4 Gene | noncodev4.gene |
http://www.bioinfo.org/NONCODEv4/show_gene.php?id=NONHSAG00001 |
| Bioregistry | bioregistry |
https://bioregistry.io/noncodev4.gene:NONHSAG00001 |
| Identifiers.org | miriam |
https://identifiers.org/noncodev4.gene:NONHSAG00001 |
| Name-to-Thing | n2t |
https://n2t.net/noncodev4.gene:NONHSAG00001 |