A database providing information on the structure of assembled genomes, assembly names and other meta-data, statistical reports, and links to genomic sequence data.

Prefix
assembly
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Assembly should match this regular expression:
^[a-zA-Z0-9_\.]+$

Example Local Unique Identifier
GCF_000005845.2   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Assembly should match this regular expression:
^assembly:[a-zA-Z0-9_\.]+$

Example CURIE
assembly:GCF_000005845.2
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 1 mappings to external registries for assembly.

Registry Name Metaprefix External Prefix
Identifiers.org miriam assembly
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE assembly:GCF_000005845.2 is used to demonstrate the provides available for assembly. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Assembly assembly https://www.ncbi.nlm.nih.gov/assembly/GCF_000005845.2
Bioregistry bioregistry https://bioregistry.io/assembly:GCF_000005845.2
Identifiers.org miriam https://identifiers.org/assembly:GCF_000005845.2