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DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 [ Homo sapiens (human) ]

Gene ID: 8445, updated on 7-Apr-2024

Summary

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Official Symbol
DYRK2provided by HGNC
Official Full Name
dual specificity tyrosine phosphorylation regulated kinase 2provided by HGNC
Primary source
HGNC:HGNC:3093
See related
Ensembl:ENSG00000127334 MIM:603496; AllianceGenome:HGNC:3093
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
DYRK2 belongs to a family of protein kinases whose members are presumed to be involved in cellular growth and/or development. The family is defined by structural similarity of their kinase domains and their capability to autophosphorylate on tyrosine residues. DYRK2 has demonstrated tyrosine autophosphorylation and catalyzed phosphorylation of histones H3 and H2B in vitro. Two isoforms of DYRK2 have been isolated. The predominant isoform, isoform 1, lacks a 5' terminal insert. [provided by RefSeq, Jul 2008]
Expression
Ubiquitous expression in colon (RPKM 11.8), small intestine (RPKM 10.4) and 25 other tissues See more
Orthologs
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Genomic context

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Location:
12q15
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (67648745..67665406)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (67628264..67644920)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (68042525..68059186)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:67913523-67914188 Neighboring gene long intergenic non-protein coding RNA 2408 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4640 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6628 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:67948831-67949332 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:67949333-67949832 Neighboring gene long intergenic non-protein coding RNA 2442 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:67983387-67983606 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6629 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4641 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4642 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4643 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4644 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6630 Neighboring gene uncharacterized LOC105369816 Neighboring gene uncharacterized LOC124902958

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Emerging roles of DYRK2 in cancer. Tandon V, et al. J Biol Chem, 2021 Jan-Jun. PMID 33376136, Free PMC Article
  2. Frequent DYRK2 gene amplification in micropapillary element of lung adenocarcinoma - an implication in progression in EGFR-mutated lung adenocarcinoma. Koike C, et al. Histol Histopathol, 2021 Mar. PMID 33368138
  3. Multiple functions of DYRK2 in cancer and tissue development. Yoshida S, et al. FEBS Lett, 2019 Nov. PMID 31505048
  4. Forced expression of DYRK2 exerts anti-tumor effects via apoptotic induction in liver cancer. Yokoyama-Mashima S, et al. Cancer Lett, 2019 Jun 1. PMID 30851422
  5. Regulation of Glioma Cells Migration by DYRK2. Shen Y, et al. Neurochem Res, 2017 Nov. PMID 28677030

See all (66) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. FBXW7 tumor suppressor regulation by dualspecificity tyrosine-regulated kinase 2.
    Title: FBXW7 tumor suppressor regulation by dualspecificity tyrosine-regulated kinase 2.
  2. Dual inhibition of HSF1 and DYRK2 impedes cancer progression.
    Title: Dual inhibition of HSF1 and DYRK2 impedes cancer progression.
  3. Selective inhibition reveals the regulatory function of DYRK2 in protein synthesis and calcium entry.
    Title: Selective inhibition reveals the regulatory function of DYRK2 in protein synthesis and calcium entry.
  4. Combination of DYRK2 and TERT Expression Is a Powerful Predictive Marker for Early-stage Breast Cancer Recurrence.
    Title: Combination of DYRK2 and TERT Expression Is a Powerful Predictive Marker for Early-stage Breast Cancer Recurrence.
  5. Frequent DYRK2 gene amplification in micropapillary element of lung adenocarcinoma - an implication in progression in EGFR-mutated lung adenocarcinoma.
    Title: Frequent DYRK2 gene amplification in micropapillary element of lung adenocarcinoma - an implication in progression in EGFR-mutated lung adenocarcinoma.
  6. Emerging roles of DYRK2 in cancer.
    Title: Emerging roles of DYRK2 in cancer.
  7. Impairment of DYRK2 by DNMT1mediated transcription augments carcinogenesis in human colorectal cancer.
    Title: Impairment of DYRK2 by DNMT1‑mediated transcription augments carcinogenesis in human colorectal cancer.
  8. DYRK2 is strongly activated in normal or early-stage tumor cells, where they effectively degrade Snail through betaTrCP-mediated ubiquitination, thus suppressing epithelial-mesenchymal transition.
    Title: p38 Stabilizes Snail by Suppressing DYRK2-Mediated Phosphorylation That Is Required for GSK3β-βTrCP-Induced Snail Degradation.
  9. Especially in tumor cells, accumulating studies have revealed the molecular mechanisms of DYRK2 from the aspect of apoptosis, proliferation, EMT, and stem- ness. Considering in vitro and xenograft studies as well as down-regulation of DYRK2 in tumor specimens, DYRK2 is an important candidate for tumor suppressor. [review]
    Title: Multiple functions of DYRK2 in cancer and tissue development.
  10. DYRK2 phosphorylates NDEL1 S336 to prime the phosphorylation of NDEL1 S332 by GSK3beta. The data suggest the NDEL1 phosphorylation at S336/S332 by the TARA-DYRK2-GSK3beta complex as a novel regulatory mechanism underlying neuronal morphogenesis.
    Title: Sequential phosphorylation of NDEL1 by the DYRK2-GSK3β complex is critical for neuronal morphogenesis.
Submit: New GeneRIF Correction See all GeneRIFs (32)

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

HIV-1 interactions

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Protein interactions

Protein Gene Interaction Pubs
Envelope surface glycoprotein gp120 env HIV-1 gp120 upregulates the expression of dual-specificity tyrosine (Y)-phosphorylation regulated kinase 2 (DYRK2) in human B cells PubMed

Go to the HIV-1, Human Interaction Database

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • FLJ21217, FLJ21365

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables ATP binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables magnesium ion binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables manganese ion binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein serine kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein serine/threonine kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein serine/threonine kinase activity TAS
Traceable Author Statement
more info
  
enables protein serine/threonine/tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein tyrosine kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in negative regulation of calcineurin-NFAT signaling cascade IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in peptidyl-serine phosphorylation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in peptidyl-threonine phosphorylation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in positive regulation of glycogen biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in protein phosphorylation IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in regulation of signal transduction by p53 class mediator TAS
Traceable Author Statement
more info
  
involved_in smoothened signaling pathway IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
  
located_in nucleoplasm IDA
Inferred from Direct Assay
more info
  
located_in nucleoplasm TAS
Traceable Author Statement
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
part_of ubiquitin ligase complex IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
dual specificity tyrosine-phosphorylation-regulated kinase 2
Names
dual specificity tyrosine-(Y)-phosphorylation regulated kinase 2
NP_003574.1
NP_006473.2
XP_016875521.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_003583.4 → NP_003574.1  dual specificity tyrosine-phosphorylation-regulated kinase 2 isoform 1

    See identical proteins and their annotated locations for NP_003574.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) does not include the 149 bp insert in the 5' end of the transcript and thus results in a shorter amino-terminal protein.
    Source sequence(s)
    AC078777, AK025018, BC005809, BC006375, CN303286, DA768075, DB461362
    Consensus CDS
    CCDS8979.1
    UniProtKB/Swiss-Prot
    Q92630
    Related
    ENSP00000377186.3, ENST00000393555.3
    Conserved Domains (1) summary
    cd14224
    Location:83 → 462
    PKc_DYRK2_3; Catalytic domain of the protein kinases, Dual-specificity tYrosine-phosphorylated and -Regulated Kinases 2 and 3

  2. NM_006482.3 → NP_006473.2  dual specificity tyrosine-phosphorylation-regulated kinase 2 isoform 2

    See identical proteins and their annotated locations for NP_006473.2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) includes the 149 bp insert in the 5' end of the transcript and thus results in a longer amino-terminal protein.
    Source sequence(s)
    AC078777, AK025018, BC005809, BC006375, CN303286, DA768075, DB461362
    Consensus CDS
    CCDS8978.1
    UniProtKB/Swiss-Prot
    B2R9V9, Q92630, Q9BRB5
    Related
    ENSP00000342105.4, ENST00000344096.4
    Conserved Domains (1) summary
    cd14224
    Location:156 → 535
    PKc_DYRK2_3; Catalytic domain of the protein kinases, Dual-specificity tYrosine-phosphorylated and -Regulated Kinases 2 and 3

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    67648745..67665406
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017020032.2 → XP_016875521.1  dual specificity tyrosine-phosphorylation-regulated kinase 2 isoform X1

    UniProtKB/Swiss-Prot
    Q92630
    Conserved Domains (1) summary
    cd14224
    Location:83 → 462
    PKc_DYRK2_3; Catalytic domain of the protein kinases, Dual-specificity tYrosine-phosphorylated and -Regulated Kinases 2 and 3

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    67628264..67644920
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q92630.3 GenPept UniProtKB/Swiss-Prot:Q92630

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
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