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KOB1 elongation defective 1 protein / ELD1 protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820002, updated on 7-Sep-2023

Summary

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Gene symbol
KOB1
Gene description
elongation defective 1 protein / ELD1 protein
Primary source
Araport:AT3G08550
Locus tag
AT3G08550
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ABA INSENSITIVE 8; ABI8; ELD1; ELONGATION DEFECTIVE 1; KOBITO
Summary
mutant is Dwarfed and shows defects in cell elongation; Cellulose deficient; Plasma Membrane Protein
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Genomic context

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Location:
chromosome: 3
Exon count:
11
Sequence:
Chromosome: 3; NC_003074.8 (2596023..2599898)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L41 family Neighboring gene Clathrin, heavy chain Neighboring gene vacuolar H+-ATPase subunit E isoform 2 Neighboring gene Phototropic-responsive NPH3 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Glycosyltransferase-like protein ABI8/ELD1/KOB1 promotes Arabidopsis hypocotyl elongation through regulating cellulose biosynthesis. Wang X, et al. Plant Cell Environ, 2015 Mar. PMID 24995569
  2. Regulation of plasmodesmatal permeability and stomatal patterning by the glycosyltransferase-like protein KOBITO1. Kong D, et al. Plant Physiol, 2012 May. PMID 22457425, Free PMC Article
  3. The elongation defective1 mutant of Arabidopsis is impaired in the gene encoding a serine-rich secreted protein. Lertpiriyapong K, et al. Plant Mol Biol, 2003 Nov. PMID 15010620
  4. The Arabidopsis thaliana ABSCISIC ACID-INSENSITIVE8 encodes a novel protein mediating abscisic acid and sugar responses essential for growth. Brocard-Gifford I, et al. Plant Cell, 2004 Feb. PMID 14742875, Free PMC Article
  5. KOBITO1 encodes a novel plasma membrane protein necessary for normal synthesis of cellulose during cell expansion in Arabidopsis. Pagant S, et al. Plant Cell, 2002 Sep. PMID 12215501, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. ABI8 functions as a negative factor in light inhibition of hypocotyl elongation through modulating cellulose biosynthesis.
    Title: Glycosyltransferase-like protein ABI8/ELD1/KOB1 promotes Arabidopsis hypocotyl elongation through regulating cellulose biosynthesis.
  2. The KOBITO1 gene is necessary for the regulation of plasmodesma permeability.
    Title: Regulation of plasmodesmatal permeability and stomatal patterning by the glycosyltransferase-like protein KOBITO1.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Homology

NM_111689.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables glycosyltransferase activity ISM
Inferred from Sequence Model
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in cellular response to light stimulus IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within cellulose biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in cellulose microfibril organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in developmental growth involved in morphogenesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in maintenance of root meristem identity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within plant-type cell wall modification involved in multidimensional cell growth IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within plasmodesma organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of plant-type cell wall cellulose biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to abscisic acid IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to glucose IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in response to light stimulus IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within unidimensional cell growth IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 
located_in Golgi trans cisterna HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in endosome HDA PubMed 
located_in plant-type cell wall IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in trans-Golgi network HDA PubMed 

General protein information

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Preferred Names
elongation defective 1 protein / ELD1 protein
NP_187467.1
  • KOBITO (KOB1); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57200.1); Has 94 Blast hits to 94 proteins in 32 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    2596023..2599898
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111689.5 → NP_187467.1  elongation defective 1 protein / ELD1 protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187467.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C9Z9
    UniProtKB/TrEMBL
    A0A178V9W7, A0A5S9XA97, A0A654F571
    Conserved Domains (1) summary
    cl11394
    Location:238 → 382
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9C9Z9.1

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