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AT2G42490 Copper amine oxidase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818849, updated on 15-Feb-2024

Summary

Gene symbol
AT2G42490
Gene description
Copper amine oxidase family protein
Primary source
Araport:AT2G42490
Locus tag
AT2G42490
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MHK10.21; MHK10_21
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Genomic context

Location:
chromosome: 2
Exon count:
12
Sequence:
Chromosome: 2; NC_003071.7 (17691407..17696023, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene MATH domain/coiled-coil protein Neighboring gene ncRNA Neighboring gene protein phosphatase 2A-3 Neighboring gene survival motor neuron interacting protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene cold regulated 15b

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_129810.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables aliphatic amine oxidase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 
enables primary amine oxidase activity IEA
Inferred from Electronic Annotation
more info
 
enables quinone binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within lateral root formation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in putrescine catabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in response to abscisic acid IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to jasmonic acid IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to molecule of bacterial origin IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to salicylic acid IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to wounding IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
 
located_in cytosol HDA PubMed 
colocalizes_with peroxisome IDA
Inferred from Direct Assay
more info
PubMed 
located_in peroxisome IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
Copper amine oxidase family protein
NP_181777.2
  • Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT3G43670.1); Has 1554 Blast hits to 1550 proteins in 277 species: Archae - 14; Bacteria - 379; Metazoa - 243; Fungi - 461; Plants - 232; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    17691407..17696023 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129810.5NP_181777.2  Copper amine oxidase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181777.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q56W61, Q8L866, Q9SLB1
    UniProtKB/TrEMBL
    A0A178VYJ2, A0A7G2EJF8
    Conserved Domains (1) summary
    PRK11504
    Location:78749
    tynA; primary-amine oxidase