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Vmn1r63 vomeronasal 1 receptor 63 [ Mus musculus (house mouse) ]

Gene ID: 81017, updated on 8-Feb-2024

Summary

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Official Symbol
Vmn1r63provided by MGI
Official Full Name
vomeronasal 1 receptor 63provided by MGI
Primary source
MGI:MGI:3033470
See related
Ensembl:ENSMUSG00000058631 AllianceGenome:MGI:3033470
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
V1R1; V3R1; V1rd1
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Genomic context

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Location:
7 A1; 7 3.36 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (5805344..5829228, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (5802345..5826229, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor, pseudogene 42 Neighboring gene vomeronasal 1 receptor, pseudogene 43 Neighboring gene vomeronasal 1 receptor, pseudogene 44 Neighboring gene STARR-seq mESC enhancer starr_17960 Neighboring gene vomeronasal 1 receptor 64 Neighboring gene STARR-seq mESC enhancer starr_17961 Neighboring gene STARR-seq mESC enhancer starr_17962 Neighboring gene vomeronasal 1 receptor, pseudogene 45

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A novel family of candidate pheromone receptors in mammals. Pantages E, et al. Neuron, 2000 Dec. PMID 11163270
  2. Multiple new and isolated families within the mouse superfamily of V1r vomeronasal receptors. Rodriguez I, et al. Nat Neurosci, 2002 Feb. PMID 11802169
  3. A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome. Mural RJ, et al. Science, 2002 May 31. PMID 12040188
  4. Manual annotation and analysis of the defensin gene cluster in the C57BL/6J mouse reference genome. Amid C, et al. BMC Genomics, 2009 Dec 15. PMID 20003482, Free PMC Article
  5. Extreme variability among mammalian V1R gene families. Young JM, et al. Genome Res, 2010 Jan. PMID 19952141, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
vomeronasal 1 receptor 63
Names
pheromone receptor V3R1
vomernasal 1 receptor Vmn1r63
vomeronasal 1 receptor, D1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_030742.1 → NP_109667.1  vomeronasal 1 receptor 63

    See identical proteins and their annotated locations for NP_109667.1

    Status: VALIDATED

    Source sequence(s)
    AF324866
    Consensus CDS
    CCDS20765.1
    UniProtKB/TrEMBL
    E9PV27, Q0VDQ1, Q9EPS8, Q9EPT0, Q9EPT1
    Related
    ENSMUSP00000074593.7, ENSMUST00000075085.7
    Conserved Domains (2) summary
    cd14964
    Location:7 → 30
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:7 → 282
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    5805344..5829228 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017312405.1 → XP_017167894.1  vomeronasal 1 receptor 63 isoform X1

    UniProtKB/TrEMBL
    E9PV27, Q0VDQ1, Q9EPS8, Q9EPT0, Q9EPT1
    Conserved Domains (2) summary
    cd14964
    Location:7 → 30
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:7 → 282
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein Strain
Heading Accession and Version

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