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ESRRB estrogen related receptor beta [ Gallus gallus (chicken) ]

Gene ID: 771938, updated on 5-Mar-2024

Summary

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Symbol
ESRRBprovided by CGNC
Full Name
estrogen related receptor betaprovided by CGNC
Primary source
CGNC:7889
See related
Ensembl:ENSGALG00010005211
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ESRRB in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (38139044..38266739)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (38108632..38236291)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110899 Neighboring gene transforming growth factor beta 3 Neighboring gene intraflagellar transport 43 Neighboring gene G-patch domain containing 2 like Neighboring gene uncharacterized LOC107053519 Neighboring gene uncharacterized LOC121113273 Neighboring gene vasohibin 1 Neighboring gene angel homolog 1 Neighboring gene leucine rich repeat containing 74A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear steroid receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
steroid hormone receptor ERR2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    38139044..38266739
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015287714.4 → XP_015143200.1  steroid hormone receptor ERR2 isoform X3

    UniProtKB/TrEMBL
    A0A8V0XFI3, A0A8V0XJM5
    Related
    ENSGALP00010006899.1, ENSGALT00010012335.1
    Conserved Domains (2) summary
    cd06946
    Location:212 → 431
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:98 → 193
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  2. XM_015287711.4 → XP_015143197.1  steroid hormone receptor ERR2 isoform X2

    UniProtKB/TrEMBL
    A0A1D5PDM1, A0A8V0XFI3, A0A8V0XJM5
    Related
    ENSGALP00010006900.1, ENSGALT00010012336.1
    Conserved Domains (2) summary
    cd06946
    Location:217 → 436
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:103 → 198
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  3. XM_015287709.4 → XP_015143195.1  steroid hormone receptor ERR2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5NVI7, A0A8V0XFI3
    Related
    ENSGALP00010006895.1, ENSGALT00010012331.1
    Conserved Domains (2) summary
    cd06946
    Location:233 → 452
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:119 → 214
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    38108632..38236291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040672792.2 → XP_040528726.1  steroid hormone receptor ERR2 isoform X3

    UniProtKB/TrEMBL
    A0A8V0XFI3, A0A8V0XJM5
    Conserved Domains (2) summary
    cd06946
    Location:212 → 431
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:98 → 193
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  2. XM_040672791.2 → XP_040528725.1  steroid hormone receptor ERR2 isoform X2

    UniProtKB/TrEMBL
    A0A1D5PDM1, A0A8V0XFI3, A0A8V0XJM5
    Conserved Domains (2) summary
    cd06946
    Location:217 → 436
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:103 → 198
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  3. XM_040672789.2 → XP_040528723.1  steroid hormone receptor ERR2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5NVI7, A0A8V0XFI3
    Conserved Domains (2) summary
    cd06946
    Location:233 → 452
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:119 → 214
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers
Nucleotide Protein
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