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GTF2A2 general transcription factor IIA subunit 2 [ Gallus gallus (chicken) ]

Gene ID: 770910, updated on 5-Mar-2024

Summary

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Symbol
GTF2A2provided by CGNC
Full Name
general transcription factor IIA subunit 2provided by CGNC
Primary source
CGNC:2774
See related
Ensembl:ENSGALG00010024716
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 10 NC_052541.1 (5412883..5417917)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 10 NC_052582.1 (5287094..5292128)

Chromosome 10 - NC_052541.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121111665 Neighboring gene uncharacterized LOC107052147 Neighboring gene uncharacterized LOC124417126 Neighboring gene BCL2 interacting protein 2 Neighboring gene OTU deubiquitinase 7A Neighboring gene glucosaminyl (N-acetyl) transferase 3, mucin type Neighboring gene Kruppel like factor 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chromosomal position, structure, expression, and requirement of genes for chicken transcription factor IIA. Mabuchi T, et al. Gene, 2007 Aug 1. PMID 17544229

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II general transcription initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables TBP-class protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA polymerase II preinitiation complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription initiation factor IIA subunit 2
Names
general transcription facter IIA subunit 2
general transcription factor IIA 2
general transcription factor IIA, 2, 12kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081708.1 → NP_001075177.1  transcription initiation factor IIA subunit 2

    See identical proteins and their annotated locations for NP_001075177.1

    Status: PROVISIONAL

    Source sequence(s)
    AB264606
    UniProtKB/TrEMBL
    A1IIE5, F1NE94
    Conserved Domains (1) summary
    COG5123
    Location:3 → 103
    TOA2; Transcription initiation factor IIA, gamma subunit [Transcription]

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052541.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5412883..5417917
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015278899.4 → XP_015134385.1  transcription initiation factor IIA subunit 2 isoform X1

    UniProtKB/TrEMBL
    A1IIE5, F1NE94
    Related
    ENSGALP00010037092.1, ENSGALT00010060333.1
    Conserved Domains (1) summary
    COG5123
    Location:3 → 103
    TOA2; Transcription initiation factor IIA, gamma subunit [Transcription]

  2. XM_025153876.3 → XP_025009644.1  transcription initiation factor IIA subunit 2 isoform X1

    UniProtKB/TrEMBL
    A1IIE5, F1NE94
    Conserved Domains (1) summary
    COG5123
    Location:3 → 103
    TOA2; Transcription initiation factor IIA, gamma subunit [Transcription]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052582.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5287094..5292128
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046925010.1 → XP_046780966.1  transcription initiation factor IIA subunit 2 isoform X1

    UniProtKB/TrEMBL
    A1IIE5, F1NE94

  2. XM_046925011.1 → XP_046780967.1  transcription initiation factor IIA subunit 2 isoform X1

    UniProtKB/TrEMBL
    A1IIE5, F1NE94
Nucleotide Protein
Heading Accession and Version

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