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ccnb3 cyclin B3 [ Danio rerio (zebrafish) ]

Gene ID: 767751, updated on 27-Mar-2024

Summary

Official Symbol
ccnb3provided by ZNC
Official Full Name
cyclin B3provided by ZNC
Primary source
ZFIN:ZDB-GENE-060929-684
See related
Ensembl:ENSDARG00000034855 AllianceGenome:ZFIN:ZDB-GENE-060929-684
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:153369
Summary
Predicted to enable cyclin-dependent protein serine/threonine kinase regulator activity. Predicted to be involved in mitotic cell cycle phase transition and regulation of cyclin-dependent protein serine/threonine kinase activity. Predicted to act upstream of or within regulation of G2/M transition of mitotic cell cycle. Predicted to be part of cyclin-dependent protein kinase holoenzyme complex. Predicted to be active in centrosome; cytoplasm; and nucleus. Is expressed in spermatocyte; spermatogonium; and testis. Orthologous to human CCNB3 (cyclin B3). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 7
Exon count:
12
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (22981962..23004700)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (22710805..22733543)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene TNF superfamily member 10, like Neighboring gene si:dkey-171c9.3 Neighboring gene uncharacterized LOC101882780 Neighboring gene uncharacterized LOC101882837

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

General gene information

Clone Names

  • MGC153369, MGC174595

Gene Ontology Provided by ZFIN

Process Evidence Code Pubs
acts_upstream_of_or_within cell cycle IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cell division IEA
Inferred from Electronic Annotation
more info
 
involved_in mitotic cell cycle phase transition IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within mitotic cell cycle phase transition IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of cyclin-dependent protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in centrosome IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of cyclin-dependent protein kinase holoenzyme complex IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
G2/mitotic-specific cyclin-B3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076719.1NP_001070187.1  G2/mitotic-specific cyclin-B3

    See identical proteins and their annotated locations for NP_001070187.1

    Status: PROVISIONAL

    Source sequence(s)
    BC124332
    UniProtKB/TrEMBL
    Q08C91
    Related
    ENSDARP00000105003.2, ENSDART00000122449.4
    Conserved Domains (2) summary
    pfam00134
    Location:145270
    Cyclin_N; Cyclin, N-terminal domain
    pfam02984
    Location:272386
    Cyclin_C; Cyclin, C-terminal domain

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    22981962..23004700
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394688.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    108108..131167
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)