adipoqb adiponectin, C1Q and collagen domain containing, b [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: adipoqbprovided by ZNC
Official Full Name: adiponectin, C1Q and collagen domain containing, bprovided by ZNC
Primary source: ZFIN:ZDB-GENE-060825-220
See related: Ensembl:ENSDARG00000100086 AllianceGenome:ZFIN:ZDB-GENE-060825-220
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: acrpl; adipo-b; adipoql; zgc:153584
Summary: Predicted to enable hormone activity. Predicted to be located in extracellular region. Predicted to be part of collagen trimer. Is expressed in several structures, including adipose tissue; ball; liver; notochord; and pancreas. Human ortholog(s) of this gene implicated in several diseases, including carcinoma (multiple); cardiovascular system disease (multiple); non-alcoholic fatty liver disease; primary open angle glaucoma; and type 2 diabetes mellitus. Orthologous to human ADIPOQ (adiponectin, C1Q and collagen domain containing). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 2

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	2	NC_007113.7 (4490604..4496355, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	2	NC_007113.6 (4649979..4655730, complement)

Chromosome 2 - NC_007113.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Adiponectin and adiponectin receptor genes are coexpressed during zebrafish embryogenesis and regulated by food deprivation
Title: Adiponectin and adiponectin receptor genes are coexpressed during zebrafish embryogenesis and regulated by food deprivation.

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
part_of collagen trimer	IEA Inferred from Electronic Annotation more info
located_in extracellular region	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: adiponectin, C1Q and collagen domain containing, b

Names: acrp30; adiponectin b; adiponectin, C1Q and collagen domain containing, like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001045425.2 → NP_001038890.1 adiponectin, C1Q and collagen domain containing, b precursor

See identical proteins and their annotated locations for NP_001038890.1

Status: PROVISIONAL

Source sequence(s)

BC122338

UniProtKB/TrEMBL

Q0P415

Related

ENSDARP00000146965.1, ENSDART00000191702.1

Conserved Domains (2) summary

smart00110
Location:133 → 268

C1Q; Complement component C1q domain

pfam01391
Location:69 → 133

Collagen; Collagen triple helix repeat (20 copies)