GTF2H1 general transcription factor IIH subunit 1 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: GTF2H1provided by VGNC
Official Full Name: general transcription factor IIH subunit 1provided by VGNC
Primary source: VGNC:VGNC:3118
Locus tag: CK820_G0005641
See related: Ensembl:ENSPTRG00000003420
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 11

Exon count:: 18

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	9	NC_072407.2 (22366623..22411410)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	11	NC_072409.1 (22230822..22275524)

Chromosome 9 - NC_072407.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Markers

RH79042 (e-PCR)
- UniSTS:11294

RH65846 (e-PCR)
- UniSTS:46627

G54112 (e-PCR)
- UniSTS:109349

GTF2H1 (e-PCR)
- UniSTS:16235

GTF2H1_3373 (e-PCR)
- UniSTS:462228

RH118763 (e-PCR)
- UniSTS:138175

SHGC-30910 (e-PCR)
- UniSTS:65237

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Process	Evidence Code	Pubs
involved_in nucleotide-excision repair	IEA Inferred from Electronic Annotation more info	PubMed
involved_in transcription by RNA polymerase I	IEA Inferred from Electronic Annotation more info	PubMed
involved_in transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of transcription factor TFIIH core complex	IEA Inferred from Electronic Annotation more info	PubMed
part_of transcription factor TFIIH holo complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: general transcription factor IIH subunit 1

Names: general transcription factor IIH, polypeptide 1, 62kDa

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

22366623..22411410

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_001173120.7 → XP_001173120.1 general transcription factor IIH subunit 1 isoform X2

See identical proteins and their annotated locations for XP_001173120.1

UniProtKB/TrEMBL

A0A2I3SS53, A0A2J8P4W6, A0A6D2XTT6, H2Q394

Related

ENSPTRP00000005956.2

Conserved Domains (2) summary

smart00751
Location:182 → 232

BSD; domain in transcription factors and synapse-associated proteins

cd13229
Location:9 → 102

PH_TFIIH; Transcription Factor II H (TFIIH) Pleckstrin homology (PH) domain
XM_063782828.1 → XP_063638898.1 general transcription factor IIH subunit 1 isoform X2

UniProtKB/TrEMBL

A0A2J8P4W6, A0A6D2XTT6, H2Q394
XM_054662140.2 → XP_054518115.1 general transcription factor IIH subunit 1 isoform X1
XM_016920540.4 → XP_016776029.1 general transcription factor IIH subunit 1 isoform X1

UniProtKB/TrEMBL

A0A2I3SS53
XM_054662141.2 → XP_054518116.1 general transcription factor IIH subunit 1 isoform X1
XM_054662142.2 → XP_054518117.1 general transcription factor IIH subunit 1 isoform X1
XM_054662143.2 → XP_054518118.1 general transcription factor IIH subunit 1 isoform X1