ID4 inhibitor of DNA binding 4 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: ID4provided by VGNC
Official Full Name: inhibitor of DNA binding 4provided by VGNC
Primary source: VGNC:VGNC:13021
Locus tag: CK820_G0038698
See related: Ensembl:ENSPTRG00000052245
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	5	NC_072403.2 (25787645..25790985)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	6	NC_072404.1 (25787654..25790994)

Chromosome 5 - NC_072403.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Markers

AL020973 (e-PCR)
- UniSTS:41253

A007A41 (e-PCR)
- UniSTS:61993

D6S1228E (e-PCR)
- UniSTS:55652

WI-7424 (e-PCR)
- UniSTS:30329

RH91195 (e-PCR)
- UniSTS:86707

ID4_2076 (e-PCR)
- UniSTS:280772

RH46626 (e-PCR)
- UniSTS:44231

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein dimerization activity	IEA Inferred from Electronic Annotation more info	PubMed
enables transcription regulator activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in cell differentiation	IEA Inferred from Electronic Annotation more info	PubMed
involved_in circadian regulation of gene expression	IEA Inferred from Electronic Annotation more info	PubMed
involved_in negative regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: DNA-binding protein inhibitor ID-4

Names: inhibitor of DNA binding 4, HLH protein; inhibitor of DNA binding 4, dominant negative helix-loop-helix protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

25787645..25790985

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_001170946.7 → XP_001170946.3 DNA-binding protein inhibitor ID-4 isoform X2

UniProtKB/TrEMBL

A0A2I3RNN2

Related

ENSPTRP00000065947.1

Conserved Domains (1) summary

cd19694
Location:62 → 117

bHLH_dnHLH_ID4; basic helix-loop-helix (bHLH) domain found in DNA-binding protein inhibitor ID4 and similar proteins
XM_016954975.4 → XP_016810464.1 DNA-binding protein inhibitor ID-4 isoform X1

UniProtKB/TrEMBL

A0A2J8KI37, A0A6D2Y5I1, K7ASY9

Related

ENSPTRP00000071695.1

Conserved Domains (1) summary

cd19694
Location:62 → 117

bHLH_dnHLH_ID4; basic helix-loop-helix (bHLH) domain found in DNA-binding protein inhibitor ID4 and similar proteins