E2F5 E2F transcription factor 5 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: E2F5provided by VGNC
Official Full Name: E2F transcription factor 5provided by VGNC
Primary source: VGNC:VGNC:6666
Locus tag: CK820_G0027334
See related: Ensembl:ENSPTRG00000020384
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 8

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	7	NC_072405.2 (93839296..93876884)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	8	NC_072406.1 (98862253..98898694)

Chromosome 7 - NC_072405.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Markers

SGC35072 (e-PCR)
- UniSTS:13605

E2F5_2517 (e-PCR)
- UniSTS:280650

G31115 (e-PCR)
- UniSTS:51319

SHGC-35383 (e-PCR)
- UniSTS:30840

RH16329 (e-PCR)
- UniSTS:66433

NoName (e-PCR)
- UniSTS:494543

NoName (e-PCR)
- UniSTS:483830

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific	IEA Inferred from Electronic Annotation more info	PubMed
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables protein dimerization activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of RNA polymerase II transcription regulator complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: transcription factor E2F5

Names: E2F transcription factor 5, p130-binding

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072405.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

93839296..93876884

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_001169141.8 → XP_001169141.1 transcription factor E2F5 isoform X1

See identical proteins and their annotated locations for XP_001169141.1

UniProtKB/TrEMBL

A0A2I3TX97, A0A2J8LPB1

Related

ENSPTRP00000093803.1

Conserved Domains (2) summary

cd14660
Location:128 → 232

E2F_DD; Dimerization domain of E2F transcription factors

pfam02319
Location:52 → 116

E2F_TDP; E2F/DP family winged-helix DNA-binding domain
XM_009455577.4 → XP_009453852.1 transcription factor E2F5 isoform X2

See identical proteins and their annotated locations for XP_009453852.1

UniProtKB/TrEMBL

A0A2I3TX97, A0A2J8LPB8, A0A6D2W1S5, H2QWD1

Related

ENSPTRP00000034872.5

Conserved Domains (2) summary

cd14660
Location:128 → 232

E2F_DD; Dimerization domain of E2F transcription factors

pfam02319
Location:52 → 116

E2F_TDP; E2F/DP family winged-helix DNA-binding domain
XM_063817235.1 → XP_063673305.1 transcription factor E2F5 isoform X3

UniProtKB/TrEMBL

A0A2J8LPA3