U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MMP23 matrix metallopeptidase 23 [ Pan troglodytes (chimpanzee) ]

Gene ID: 746857, updated on 29-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
MMP23provided by VGNC
Official Full Name
matrix metallopeptidase 23provided by VGNC
Primary source
VGNC:VGNC:11539
Locus tag
CK820_G0053736
See related
Ensembl:ENSPTRG00000000035
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
MMP23B
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (230320507..230323162, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (975908..978942)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member E2 Neighboring gene uncharacterized LOC101058091 Neighboring gene cyclin dependent kinase 11 Neighboring gene MIB E3 ubiquitin protein ligase 2 Neighboring gene fibronectin type III domain containing 10

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
matrix metalloproteinase-23
Names
matrix metallopeptidase 23B

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    230320507..230323162 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016952309.4 → XP_016807798.1  matrix metalloproteinase-23

    UniProtKB/TrEMBL
    A0A2J8IRZ0, A0A5S6R720, H2PXU2, K7ATC8
    Related
    ENSPTRP00000000055.5
    Conserved Domains (3) summary
    smart00408
    Location:313 → 373
    IGc2; Immunoglobulin C-2 Type
    smart00254
    Location:255 → 289
    ShKT; ShK toxin domain
    cd04278
    Location:87 → 254
    ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.