RARB retinoic acid receptor beta [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: RARBprovided by VGNC
Official Full Name: retinoic acid receptor betaprovided by VGNC
Primary source: VGNC:VGNC:7111
Locus tag: CK820_G0008918
See related: Ensembl:ENSPTRG00000014698
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	2	NC_086015.1 (28814174..29583715)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	3	NC_072401.1 (28813838..29583383)

Chromosome 2 - NC_086015.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Markers

PMC17571P1 (e-PCR)
- UniSTS:271637

Rarb (e-PCR), detects polymorphism
- UniSTS:470565

PMC139866P1 (e-PCR)
- UniSTS:270900

SHGC-142206 (e-PCR)
- UniSTS:171319

G63645 (e-PCR)
- UniSTS:140607

RARB-707F (e-PCR)
- UniSTS:20814

RH121389 (e-PCR)
- UniSTS:134235

RH123921 (e-PCR)
- UniSTS:136296

GDB:316005 (e-PCR)
- UniSTS:156561

RARB (e-PCR)
- UniSTS:505233

RARB_245.2 (e-PCR)
- UniSTS:277660

PMC113761P1 (e-PCR)
- UniSTS:270252

RH119518 (e-PCR)
- UniSTS:133560

D3S1583 (e-PCR), detects polymorphism
- UniSTS:14289

D3S3335 (e-PCR)
- UniSTS:36064

SHGC-3675 (e-PCR)
- UniSTS:85224

SHGC-84664 (e-PCR)
- UniSTS:103151

RARB (e-PCR)
- UniSTS:266481

SHGC-76778 (e-PCR)
- UniSTS:38897

SGC31578 (e-PCR)
- UniSTS:48625

D3S4231 (e-PCR)
- UniSTS:38898

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables nuclear glucocorticoid receptor binding	IEA Inferred from Electronic Annotation more info	PubMed
enables nuclear receptor activity	IEA Inferred from Electronic Annotation more info	PubMed
enables zinc ion binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in cellular response to corticotropin-releasing hormone stimulus	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed
involved_in retinoic acid receptor signaling pathway	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed
part_of transcription regulator complex	IEA Inferred from Electronic Annotation more info	PubMed