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CYCS cytochrome c, somatic [ Pan troglodytes (chimpanzee) ]

Gene ID: 744779, updated on 29-Mar-2024

Summary

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Official Symbol
CYCSprovided by VGNC
Official Full Name
cytochrome c, somaticprovided by VGNC
Primary source
VGNC:VGNC:14767
Locus tag
CK820_G0034669
See related
Ensembl:ENSPTRG00000018996
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 6 NC_072404.2 (30944591..30947591, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 7 NC_072405.1 (28714751..28721898, complement)

Chromosome 6 - NC_072404.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134810526 Neighboring gene gasdermin E Neighboring gene oxysterol binding protein like 3 Neighboring gene sperm microtubule inner protein 4 Neighboring gene uncharacterized LOC134810484

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary variability of cytochrome c primary structures. Margoliash E, et al. Ann N Y Acad Sci, 1968 Jun 14. PMID 4975694
  2. Implications of natural selection in shaping 99.4% nonsynonymous DNA identity between humans and chimpanzees: enlarging genus Homo. Wildman DE, et al. Proc Natl Acad Sci U S A, 2003 Jun 10. PMID 12766228, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial electron transport, cytochrome c to oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial electron transport, ubiquinol to cytochrome c IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cysteine-type endopeptidase activity involved in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial intermembrane space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome c
Names
somatic cytochrome c

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001071821.1 → NP_001065289.1  cytochrome c

    See identical proteins and their annotated locations for NP_001065289.1

    Status: PROVISIONAL

    Source sequence(s)
    AY268594
    UniProtKB/Swiss-Prot
    P99998
    UniProtKB/TrEMBL
    A0A2J8KZA8, A0A663D840, G4XXM1, K7CAI8
    Conserved Domains (1) summary
    COG3474
    Location:1 → 103
    Cyc7; Cytochrome c2 [Energy production and conversion]

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072404.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    30944591..30947591 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009452537.5 → XP_009450812.1  cytochrome c isoform X1

    See identical proteins and their annotated locations for XP_009450812.1

    UniProtKB/Swiss-Prot
    P99998
    UniProtKB/TrEMBL
    A0A2J8KZA8, A0A663D840, G4XXM1, K7CAI8
    Related
    ENSPTRP00000032465.3
    Conserved Domains (1) summary
    COG3474
    Location:1 → 103
    Cyc7; Cytochrome c2 [Energy production and conversion]

  2. XM_016956905.4 → XP_016812394.1  cytochrome c isoform X1

    UniProtKB/Swiss-Prot
    P99998
    UniProtKB/TrEMBL
    A0A2J8KZA8, A0A663D840, G4XXM1, K7CAI8
    Conserved Domains (1) summary
    COG3474
    Location:1 → 103
    Cyc7; Cytochrome c2 [Energy production and conversion]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P99998.2 GenPept UniProtKB/Swiss-Prot:P99998

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