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HMBS hydroxymethylbilane synthase [ Pan troglodytes (chimpanzee) ]

Gene ID: 744366, updated on 3-Apr-2024

Summary

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Official Symbol
HMBSprovided by VGNC
Official Full Name
hydroxymethylbilane synthaseprovided by VGNC
Primary source
VGNC:VGNC:11809
Locus tag
CK820_G0015685
See related
Ensembl:ENSPTRG00000004368
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 9 NC_072407.2 (121028580..121037270)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (120247878..120256485)

Chromosome 9 - NC_072407.2Genomic Context describing neighboring genes Neighboring gene hypoxia up-regulated 1 Neighboring gene VPS11 core subunit of CORVET and HOPS complexes Neighboring gene H2A.X variant histone Neighboring gene dolichyl-phosphate N-acetylglucosaminephosphotransferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydroxymethylbilane synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heme biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-pyrromethane cofactor linkage IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
porphobilinogen deaminase
XP_016777609.3
XP_016777610.3
XP_016777611.3
XP_016777612.3
XP_016777615.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    121028580..121037270
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016922120.4 → XP_016777609.3  porphobilinogen deaminase isoform X1

    UniProtKB/TrEMBL
    H2Q4X6, K7BA13

  2. XM_016922123.4 → XP_016777612.3  porphobilinogen deaminase isoform X3

    UniProtKB/TrEMBL
    A0A2I3SA04

  3. XM_016922121.4 → XP_016777610.3  porphobilinogen deaminase isoform X2

  4. XM_016922126.4 → XP_016777615.3  porphobilinogen deaminase isoform X4

  5. XM_016922122.4 → XP_016777611.3  porphobilinogen deaminase isoform X3

    UniProtKB/TrEMBL
    A0A2I3SA04
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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