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GJA1 gap junction protein alpha 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 744245, updated on 3-Apr-2024

Summary

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Official Symbol
GJA1provided by VGNC
Official Full Name
gap junction protein alpha 1provided by VGNC
Primary source
VGNC:VGNC:2840
Locus tag
CK820_G0000397
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
CXNK2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (133311889..133326030)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (133310378..133324514)

Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 32 Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA U3 Neighboring gene U4 spliceosomal RNA Neighboring gene U4 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables gap junction channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell communication by electrical coupling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of connexin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gap junction alpha-1 protein
Names
connexin K2
gap junction protein, alpha 1, 43kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    133311889..133326030
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001164338.4 → XP_001164338.3  gap junction alpha-1 protein

    UniProtKB/TrEMBL
    A0A2J8PTS9, A0A663DIX0, H2QTN6, K7DNS0
    Conserved Domains (2) summary
    pfam00029
    Location:3 → 233
    Connexin
    pfam03508
    Location:293 → 312
    Connexin43; Gap junction alpha-1 protein (Cx43)
Nucleotide Protein
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