LOC744064 alcohol dehydrogenase 1A [Pan troglodytes (chimpanzee)] - Gene

Summary

Gene symbol: LOC744064
Gene description: alcohol dehydrogenase 1A
Locus tag: CK820_G0022200
See related: Ensembl:ENSPTRG00000041356
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as: ADH1A
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Genomic context

Location:: chromosome: 3

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	3	NC_072401.2 (100731619..100746288, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	4	NC_072402.1 (100731591..100746268, complement)

Chromosome 3 - NC_072401.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Markers

SHGC-51373 (e-PCR)
- UniSTS:41059

NoName (e-PCR)
- UniSTS:481905

GDB:187387 (e-PCR)
- UniSTS:155548

NoName (e-PCR)
- UniSTS:491183

Homology

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables alcohol dehydrogenase (NAD+) activity, zinc-dependent	IEA Inferred from Electronic Annotation more info	PubMed
enables all-trans-retinol dehydrogenase (NAD+) activity	IEA Inferred from Electronic Annotation more info	PubMed
enables zinc ion binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in retinoic acid metabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in retinol metabolic process	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytosol	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: alcohol dehydrogenase 1A

Names: alcohol dehydrogenase 1A (class I), alpha polypeptide; class I alcohol dehydrogenase, alpha subunit

XP_001166683.1

EC 1.1.1.1

XP_009446334.1

EC 1.1.1.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072401.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

100731619..100746288 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_001166683.4 → XP_001166683.1 alcohol dehydrogenase 1A isoform X1

UniProtKB/TrEMBL

A0A2J8MAQ2, A0A2J8MAS1, A0A6D2WDT9, H2QPX7

Related

ENSPTRP00000028008.2

Conserved Domains (1) summary

cd08299
Location:3 → 375

alcohol_DH_class_I_II_IV; class I, II, IV alcohol dehydrogenases
XM_009448059.4 → XP_009446334.1 alcohol dehydrogenase 1A isoform X2

UniProtKB/TrEMBL

A0A2J8MAS1

Conserved Domains (2) summary

cd08299
Location:3 → 321

alcohol_DH_class_I_II_IV; class I, II, IV alcohol dehydrogenases

COG1062
Location:8 → 325

FrmA; Zn-dependent alcohol dehydrogenase [General function prediction only]