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APOC1 apolipoprotein C1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 743864, updated on 3-Dec-2024

Summary

Official Symbol
APOC1provided by VGNC
Official Full Name
apolipoprotein C1provided by VGNC
Primary source
VGNC:VGNC:10193
Locus tag
CK820_G0049413
See related
Ensembl:ENSPTRG00000011128
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
APOC1B; Apo-CIB; ApoC-IB
Orthologs
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Genomic context

See APOC1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 20 NC_072418.2 (47871254..47875745)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 19 NC_072417.1 (47871278..47875769)

Chromosome 20 - NC_072418.2Genomic Context describing neighboring genes Neighboring gene translocase of outer mitochondrial membrane 40 Neighboring gene apolipoprotein E Neighboring gene Apolipoprotein C-I, acidic form Neighboring gene apolipoprotein C4

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular region PubMed 
part_of high-density lipoprotein particle PubMed 
part_of very-low-density lipoprotein particle PubMed 

General protein information

Preferred Names
apolipoprotein C-I, basic form
Names
Apolipoprotein C-I, basic form
Apolipoprotein C1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072418.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    47871254..47875745
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054673561.1XP_054529536.1  apolipoprotein C-I, basic form isoform X1

    UniProtKB/TrEMBL
    A0A2I3TRS5, A0A2J8PYD6, A0A6D2YBR1
  2. XM_003316444.4XP_003316492.2  apolipoprotein C-I, basic form isoform X2

    UniProtKB/TrEMBL
    A0A2J8PYC8
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