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ELK4 ETS transcription factor ELK4 [ Pan troglodytes (chimpanzee) ]

Gene ID: 742304, updated on 3-Apr-2024

Summary

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Official Symbol
ELK4provided by VGNC
Official Full Name
ETS transcription factor ELK4provided by VGNC
Primary source
VGNC:VGNC:8319
Locus tag
CK820_G0012839
See related
Ensembl:ENSPTRG00000001902
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (43448753..43478031)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (187845311..187876357, complement)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene nuclear casein kinase and cyclin dependent kinase substrate 1 Neighboring gene small nucleolar RNA SNORA72 Neighboring gene solute carrier family 45 member 3 Neighboring gene gamma-aminobutyric acid receptor-associated protein-like Neighboring gene U6 spliceosomal RNA Neighboring gene major facilitator superfamily domain containing 4A Neighboring gene uncharacterized LOC104004690

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ETS domain-containing protein Elk-4
Names
ELK4, ETS transcription factor
ELK4, ETS-domain protein (SRF accessory protein 1)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    43448753..43478031
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054674103.2 → XP_054530078.1  ETS domain-containing protein Elk-4

    UniProtKB/TrEMBL
    A0A2J8QW16, A0A6D2XSS4, H2Q0Z5, K7BXE8

  2. XM_063810189.1 → XP_063666259.1  ETS domain-containing protein Elk-4

    UniProtKB/TrEMBL
    A0A2J8QW16, A0A6D2XSS4, H2Q0Z5, K7BXE8

RNA

  1. XR_008541153.2 RNA Sequence

  2. XR_008541152.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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