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PSMC3IP PSMC3 interacting protein [ Pan troglodytes (chimpanzee) ]

Gene ID: 742143, updated on 29-Mar-2024

Summary

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Official Symbol
PSMC3IPprovided by VGNC
Official Full Name
PSMC3 interacting proteinprovided by VGNC
Primary source
VGNC:VGNC:9541
Locus tag
CK820_G0038974
See related
Ensembl:ENSPTRG00000009209
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 19 NC_072417.2 (25566362..25571973)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 17 NC_072415.1 (23749327..23756435)

Chromosome 19 - NC_072417.2Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit g, mitochondrial-like Neighboring gene tubulin gamma 1 Neighboring gene reticulophagy regulator family member 3 Neighboring gene MAX dimerization protein MLX Neighboring gene Coenzyme A synthase Neighboring gene hydroxysteroid 17-beta dehydrogenase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables recombinase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homologous chromosome pairing at meiosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in meiotic joint molecule formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in meiotic strand invasion involved in reciprocal meiotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of DNA recombinase auxiliary factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in condensed nuclear chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homologous-pairing protein 2 homolog
Names
TBP-1 interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    25566362..25571973
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001164255.8 → XP_001164255.3  homologous-pairing protein 2 homolog isoform X1

    UniProtKB/TrEMBL
    A0A2J8KFR6, K6ZGT3
    Conserved Domains (1) summary
    pfam07106
    Location:65 → 230
    TBPIP; Tat binding protein 1(TBP-1)-interacting protein (TBPIP)

  2. XM_003953014.5 → XP_003953063.1  homologous-pairing protein 2 homolog isoform X2

    UniProtKB/TrEMBL
    A0A2J8KFQ8
    Conserved Domains (1) summary
    pfam07106
    Location:1 → 102
    TBPIP; Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
Nucleotide Protein
Heading Accession and Version

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