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RAC1 Rac family small GTPase 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 741907, updated on 29-Mar-2024

Summary

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Gene symbol
RAC1
Gene description
Rac family small GTPase 1
Locus tag
CK820_G0052727
See related
Ensembl:ENSPTRG00000018910 Ensembl:ENSPTRG00000052694
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
ANTXR1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 6 NC_072404.2 (12241044..12270634, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 7 NC_072405.1 (10051174..10080722)

Chromosome 6 - NC_072404.2Genomic Context describing neighboring genes Neighboring gene KDEL endoplasmic reticulum protein retention receptor 2 Neighboring gene diacylglycerol lipase beta Neighboring gene small integral membrane protein 10 like 3 Neighboring gene family with sequence similarity 220 member A Neighboring gene cytohesin 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cortical cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in engulfment of apoptotic cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment or maintenance of cell polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in motor neuron axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell shape IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendritic spine IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related C3 botulinum toxin substrate 1
Names
anthrax toxin receptor 1
ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
NP_001233310.1
XP_016801496.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001246381.1 → NP_001233310.1  ras-related C3 botulinum toxin substrate 1

    See identical proteins and their annotated locations for NP_001233310.1

    Status: PROVISIONAL

    Source sequence(s)
    AK306487
    UniProtKB/TrEMBL
    A0A2J8IW59, A0A6D2W3E5, G2HIC3, K7CWU4
    Related
    ENSPTRP00000032298.3, ENSPTRT00000034946.4
    Conserved Domains (1) summary
    cd01871
    Location:3 → 176
    Rac1_like; Ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)-like consists of Rac1, Rac2 and Rac3

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072404.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    12241044..12270634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016946007.3 → XP_016801496.1  ras-related C3 botulinum toxin substrate 1 isoform X1

    UniProtKB/TrEMBL
    A0A2I3RVA9, A0A2J8IW68, A0A6D2XL12, H2R207
    Related
    ENSPTRP00000068561.1
    Conserved Domains (1) summary
    cd01871
    Location:3 → 195
    Rac1_like; Ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)-like consists of Rac1, Rac2 and Rac3
Nucleotide Protein
Heading Accession and Version

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