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CIR1 corepressor interacting with RBPJ, CIR1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 738618, updated on 3-Apr-2024

Summary

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Official Symbol
CIR1provided by VGNC
Official Full Name
corepressor interacting with RBPJ, CIR1provided by VGNC
Primary source
VGNC:VGNC:139
Locus tag
CK820_G0001523
See related
Ensembl:ENSPTRG00000012652
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2B
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 13 NC_072411.2 (76388235..76436439, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2B NC_072400.1 (76387981..76436391, complement)

Chromosome 13 - NC_072411.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100609402 Neighboring gene Sp9 transcription factor Neighboring gene secernin 3 Neighboring gene G protein-coupled receptor 155

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
corepressor interacting with RBPJ 1
Names
corepressor interacting with RBPJ, 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072411.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    76388235..76436439 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063791309.1 → XP_063647379.1  corepressor interacting with RBPJ 1 isoform X2

  2. XM_001148591.7 → XP_001148591.3  corepressor interacting with RBPJ 1 isoform X1

    UniProtKB/TrEMBL
    H2QJ01, K7AK75
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials
Miscellaneous