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WNT16 Wnt family member 16 [ Pan troglodytes (chimpanzee) ]

Gene ID: 737375, updated on 29-Mar-2024

Summary

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Official Symbol
WNT16provided by VGNC
Official Full Name
Wnt family member 16provided by VGNC
Primary source
VGNC:VGNC:4564
Locus tag
CK820_G0011764
See related
Ensembl:ENSPTRG00000019627
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 6 NC_072404.2 (136749591..136771792)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 7 NC_072405.1 (130804690..130820367)

Chromosome 6 - NC_072404.2Genomic Context describing neighboring genes Neighboring gene cadherin like and PC-esterase domain containing 1 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC134810565 Neighboring gene uncharacterized LOC134810567 Neighboring gene FAM3 metabolism regulating signaling molecule C Neighboring gene cytochrome c-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables frizzled binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell fate commitment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein Wnt-16
Names
wingless-type MMTV integration site family, member 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072404.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    136749591..136771792
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001143900.6 → XP_001143900.1  protein Wnt-16 isoform X2

    See identical proteins and their annotated locations for XP_001143900.1

    UniProtKB/TrEMBL
    A0A2I3RTN0, A0A2J8QX82, A0A6D2XBQ6
    Related
    ENSPTRP00000068065.1
    Conserved Domains (1) summary
    pfam00110
    Location:42 → 355
    wnt; wnt family

  2. XM_001143972.4 → XP_001143972.1  protein Wnt-16 isoform X1

    See identical proteins and their annotated locations for XP_001143972.1

    UniProtKB/TrEMBL
    A0A2J8QXA1, A0A6D2Y550, H2QVA4
    Related
    ENSPTRP00000033610.1
    Conserved Domains (1) summary
    pfam00110
    Location:52 → 365
    wnt; wnt family

RNA

  1. XR_010158960.1 RNA Sequence

  2. XR_010158963.1 RNA Sequence

  3. XR_010158964.1 RNA Sequence

  4. XR_010158961.1 RNA Sequence

  5. XR_010158962.1 RNA Sequence

Nucleotide Protein
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Gene LinkOut

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Research Materials
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