F13B coagulation factor XIII B chain [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: F13Bprovided by VGNC
Official Full Name: coagulation factor XIII B chainprovided by VGNC
Primary source: VGNC:VGNC:7403
Locus tag: CK820_G0038784
See related: Ensembl:ENSPTRG00000001806
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	1	NC_072398.2 (52046732..52074829)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	1	NC_072398.1 (179274896..179302991, complement)

Chromosome 1 - NC_072398.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Markers

AL009648 (e-PCR)
- UniSTS:44569

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Process	Evidence Code	Pubs
involved_in blood coagulation	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: coagulation factor XIII B chain

Names: coagulation factor XIII B subunit; coagulation factor XIII, B polypeptide

XP_001137074.1

EC 2.3.2.13

XP_009438547.1

EC 2.3.2.13

XP_009438553.1

EC 2.3.2.13

XP_063650091.1

EC 2.3.2.13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

52046732..52074829

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_001137074.6 → XP_001137074.1 coagulation factor XIII B chain isoform X1

UniProtKB/TrEMBL

A0A2J8KI35, A0A6D2XHE2, H2Q0U3

Related

ENSPTRP00000003013.3

Conserved Domains (1) summary

cl27761
Location:230 → 451

CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
XM_009440272.5 → XP_009438547.1 coagulation factor XIII B chain isoform X2

Conserved Domains (3) summary

cd00033
Location:274 → 328

CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

smart00032
Location:213 → 267

CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)

PHA02927
Location:274 → 516

PHA02927; secreted complement-binding protein; Provisional
XM_063794021.1 → XP_063650091.1 coagulation factor XIII B chain isoform X3
XM_009440278.5 → XP_009438553.1 coagulation factor XIII B chain isoform X4

Conserved Domains (3) summary

cd00033
Location:226 → 280

CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

smart00032
Location:165 → 219

CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)

PHA02927
Location:226 → 469

PHA02927; secreted complement-binding protein; Provisional