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Gstz1 glutathione S-transferase zeta 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 681913, updated on 11-Apr-2024

Summary

Official Symbol
Gstz1provided by RGD
Official Full Name
glutathione S-transferase zeta 1provided by RGD
Primary source
RGD:1589363
See related
Ensembl:ENSRNOG00000047708 AllianceGenome:RGD:1589363
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable glutathione transferase activity; maleylacetoacetate isomerase activity; and protein homodimerization activity. Predicted to be involved in L-phenylalanine catabolic process and glutathione metabolic process. Predicted to be located in cytoplasm. Predicted to be active in mitochondrion. Orthologous to human GSTZ1 (glutathione S-transferase zeta 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Liver (RPKM 1483.3), Kidney (RPKM 463.6) and 3 other tissues See more
Orthologs
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Genomic context

See Gstz1 in Genome Data Viewer
Location:
6q31
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (112525576..112536228)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (106794594..106805284)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (111176798..111187246)

Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene neuroglobin Neighboring gene protein-O-mannosyltransferase 2 Neighboring gene uncharacterized LOC134479237 Neighboring gene transmembrane p24 trafficking protein family member 8 Neighboring gene sterile alpha motif domain containing 15

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables glutathione transferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables glutathione transferase activity ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables maleylacetoacetate isomerase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables maleylacetoacetate isomerase activity IEA
Inferred from Electronic Annotation
more info
 
enables maleylacetoacetate isomerase activity ISO
Inferred from Sequence Orthology
more info
 
enables protein homodimerization activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in L-phenylalanine catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in L-phenylalanine catabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in glutathione metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in glutathione metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in tyrosine catabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
maleylacetoacetate isomerase
Names
GSTZ1-1
MAAI
glutathione S-transferase alpha 3
glutathione transferase zeta 1
NP_001102915.1
XP_006240461.1
XP_038968853.1
XP_063118542.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109445.1NP_001102915.1  maleylacetoacetate isomerase

    See identical proteins and their annotated locations for NP_001102915.1

    Status: PROVISIONAL

    Source sequence(s)
    CH473982
    UniProtKB/Swiss-Prot
    B0BNI1, P57113
    Related
    ENSRNOP00000065390.2, ENSRNOT00000072215.3
    Conserved Domains (3) summary
    cd03191
    Location:93207
    GST_C_Zeta; C-terminal, alpha helical domain of Class Zeta Glutathione S-transferases
    cd03042
    Location:680
    GST_N_Zeta; GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, ...
    TIGR01262
    Location:7211
    maiA; maleylacetoacetate isomerase

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086024.1 Reference GRCr8

    Range
    112525576..112536228
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039112925.2XP_038968853.1  maleylacetoacetate isomerase isoform X2

    Conserved Domains (1) summary
    TIGR01262
    Location:58191
    maiA; maleylacetoacetate isomerase
  2. XM_006240399.5XP_006240461.1  maleylacetoacetate isomerase isoform X1

    See identical proteins and their annotated locations for XP_006240461.1

    UniProtKB/TrEMBL
    A0A0G2K6H2, A6JE83
    Related
    ENSRNOP00000073813.1
    Conserved Domains (1) summary
    TIGR01262
    Location:6210
    maiA; maleylacetoacetate isomerase
  3. XM_063262472.1XP_063118542.1  maleylacetoacetate isomerase isoform X3

    UniProtKB/TrEMBL
    A6JE85