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Rps4l ribosomal protein S4-like [ Mus musculus (house mouse) ]

Gene ID: 66184, updated on 2-Apr-2024

Summary

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Official Symbol
Rps4lprovided by MGI
Official Full Name
ribosomal protein S4-likeprovided by MGI
Primary source
MGI:MGI:1913434
See related
AllianceGenome:MGI:1913434
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Rps4y2; 1110033J19Rik
Summary
Is expressed in embryo. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
6 G3; 6 78.49 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (148256154..148257094)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (148354656..148355596)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4732416N19 gene Neighboring gene ERGIC and golgi 2 Neighboring gene STARR-positive B cell enhancer ABC_E3694 Neighboring gene transmembrane and tetratricopeptide repeat containing 1 Neighboring gene predicted gene, 52483 Neighboring gene STARR-seq mESC enhancer starr_17834 Neighboring gene predicted gene, 44020 Neighboring gene STARR-seq mESC enhancer starr_17837 Neighboring gene STARR-seq mESC enhancer starr_17838 Neighboring gene predicted gene, 36613

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Ectopic expression of DNA methyltransferases DNMT3A2 and DNMT3L leads to aberrant hypermethylation and postnatal lethality in mice. Sasaki K, et al. Mol Reprod Dev, 2019 Jun. PMID 30834655, Free PMC Article
  2. Identification and expression of an autosomal paralogue of ribosomal protein S4, X-linked, in mice: potential involvement of testis-specific ribosomal proteins in translation and spermatogenesis. Sugihara Y, et al. Gene, 2013 May 25. PMID 23500592
  3. Functional Proteomic Analysis of Repressive Histone Methyltransferase Complexes Reveals ZNF518B as a G9A Regulator. Maier VK, et al. Mol Cell Proteomics, 2015 Jun. PMID 25680957, Free PMC Article
  4. RAD21 cooperates with pluripotency transcription factors in the maintenance of embryonic stem cell identity. Nitzsche A, et al. PLoS One, 2011 May 12. PMID 21589869, Free PMC Article
  5. Isolation of novel tissue-specific genes from cDNA libraries representing the individual tissue constituents of the gastrulating mouse embryo. Harrison SM, et al. Development, 1995 Aug. PMID 7671812

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. in the present study, a new paralogue of X-linked ribosomal protein S4 has been identified in the testis; the gene encoding this paralogue was autosomal, intronless and expressed predominantly in the testis
    Title: Identification and expression of an autosomal paralogue of ribosomal protein S4, X-linked, in mice: potential involvement of testis-specific ribosomal proteins in translation and spermatogenesis.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Other Names

  • ribosomal protein S4, X-linked pseudogene
  • ribosomal protein S4, Y-linked 2

Clone Names

  • MGC59460

Gene Ontology Provided by MGI

Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleolus IDA
Inferred from Direct Assay
more info
 PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003634.2 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AK132160

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    148256154..148257094
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_025405.2: Suppressed sequence

    Description
    NM_025405.2: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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