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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001270838.1 → NP_001257767.1 nuclear receptor subfamily 1 group I member 3 isoform 3
See identical proteins and their annotated locations for NP_001257767.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses an alternate splice junction at the 3' end of an exon that extends the exon to an in-frame stop codon compared to variant 1. The resulting isoform (3) is shorter at the C-terminus compared to isoform 1.
- Source sequence(s)
-
BC089763, JACYVU010000245
- UniProtKB/TrEMBL
- A0A8I6AVD8, A6JFV0, Q402C1
- Related
- ENSRNOP00000072813.1, ENSRNOT00000079355.2
- Conserved Domains (2) summary
-
- cd07156
Location:21 → 92
- NR_DBD_VDR_like; The DNA-binding domain of vitamin D receptors (VDR) like nuclear receptor family is composed of two C4-type zinc fingers
- cl11397
Location:116 → 316
- NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
-
NM_001270839.1 → NP_001257768.1 nuclear receptor subfamily 1 group I member 3 isoform 4
See identical proteins and their annotated locations for NP_001257768.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses an alternate splice site at the 5' end of an exon compared to variant 1, that causes a frameshift. The resulting isoform (4) has a shorter and distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
BC089763, JACYVU010000245
- UniProtKB/TrEMBL
- A0A8I6AVD8, A6JFV0, Q402C0
- Related
- ENSRNOP00000096651.1, ENSRNOT00000104224.1
- Conserved Domains (2) summary
-
- cd07156
Location:21 → 92
- NR_DBD_VDR_like; The DNA-binding domain of vitamin D receptors (VDR) like nuclear receptor family is composed of two C4-type zinc fingers
- cl11397
Location:116 → 281
- NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
-
NM_001270840.1 → NP_001257769.1 nuclear receptor subfamily 1 group I member 3 isoform 2
See identical proteins and their annotated locations for NP_001257769.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site at the 5' end of an exon and uses an alternate splice junction at the 3' end of an exon that extends the exon to an in-frame stop codon compared to variant 1. The resulting isoform (2) is shorter at the C-terminus and lacks a single internal aa compared to isoform 1.
- Source sequence(s)
-
BC089763
- UniProtKB/TrEMBL
- A0A8I6AVD8, A6JFV0, Q5FVU7
- Conserved Domains (2) summary
-
- cd07156
Location:21 → 92
- NR_DBD_VDR_like; The DNA-binding domain of vitamin D receptors (VDR) like nuclear receptor family is composed of two C4-type zinc fingers
- cl11397
Location:116 → 315
- NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
-
NM_022941.4 → NP_075230.1 nuclear receptor subfamily 1 group I member 3 isoform 1
See identical proteins and their annotated locations for NP_075230.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
BC089763, JACYVU010000245
- UniProtKB/Swiss-Prot
-
Q9QUS1
- UniProtKB/TrEMBL
-
A6JFU9
- Related
- ENSRNOP00000048836.3, ENSRNOT00000049873.3
- Conserved Domains (2) summary
-
- cd07156
Location:21 → 92
- NR_DBD_VDR_like; The DNA-binding domain of vitamin D receptors (VDR) like nuclear receptor family is composed of two C4-type zinc fingers
- cl11397
Location:116 → 356
- NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086031.1 Reference GRCr8
- Range
-
86165327..86170362
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_063272586.1 → XP_063128656.1 nuclear receptor subfamily 1 group I member 3 isoform X5
-
XM_063272587.1 → XP_063128657.1 nuclear receptor subfamily 1 group I member 3 isoform X6
-
XM_063272588.1 → XP_063128658.1 nuclear receptor subfamily 1 group I member 3 isoform X8
-
XM_063272589.1 → XP_063128659.1 nuclear receptor subfamily 1 group I member 3 isoform X9
-
XM_063272583.1 → XP_063128653.1 nuclear receptor subfamily 1 group I member 3 isoform X1
-
XM_063272591.1 → XP_063128661.1 nuclear receptor subfamily 1 group I member 3 isoform X10
-
XM_063272584.1 → XP_063128654.1 nuclear receptor subfamily 1 group I member 3 isoform X2
-
XM_063272585.1 → XP_063128655.1 nuclear receptor subfamily 1 group I member 3 isoform X3
-
XM_039091080.2 → XP_038947008.1 nuclear receptor subfamily 1 group I member 3 isoform X4
- UniProtKB/TrEMBL
-
A0A8I6A462
- Conserved Domains (2) summary
-
- cd07156
Location:21 → 92
- NR_DBD_VDR_like; The DNA-binding domain of vitamin D receptors (VDR) like nuclear receptor family is composed of two C4-type zinc fingers
- cl11397
Location:116 → 385
- NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
-
XM_039091081.2 → XP_038947009.1 nuclear receptor subfamily 1 group I member 3 isoform X7
- Conserved Domains (2) summary
-
- cd07156
Location:21 → 92
- NR_DBD_VDR_like; The DNA-binding domain of vitamin D receptors (VDR) like nuclear receptor family is composed of two C4-type zinc fingers
- cl11397
Location:116 → 355
- NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
RNA
-
XR_010056933.1 RNA Sequence
-
XR_010056934.1 RNA Sequence
-
XR_010056935.1 RNA Sequence
-
XR_010056936.1 RNA Sequence