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GOLGA6L17P golgin A6 family like 17, pseudogene [ Homo sapiens (human) ]

Gene ID: 642402, updated on 10-Oct-2023

Summary

Official Symbol
GOLGA6L17Pprovided by HGNC
Official Full Name
golgin A6 family like 17, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:49414
See related
AllianceGenome:HGNC:49414
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GOLGA6L21P
Expression
Broad expression in testis (RPKM 11.9), ovary (RPKM 4.9) and 23 other tissues See more
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Genomic context

Location:
15q25.2
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (82519590..82526484)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (80383739..80390696)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene chondroitin sulfate proteoglycan 4 pseudogene 10 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:83137289-83137789 Neighboring gene GOLGA2 pseudogene 10 Neighboring gene uncharacterized LOC105370926 Neighboring gene dynamin 1 pseudogene 38 Neighboring gene ribosomal protein S17

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • golgi autoantigen, golgin subfamily a, 6 pseudogene
  • golgin A6 family, member A pseudogene
  • golgin A6 family-like 21, pseudogene

Clone Names

  • FLJ61650

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_111962.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC245033

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    82519590..82526484
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187606.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    308934..315627
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    80383739..80390696
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_006148.3: Suppressed sequence

    Description
    NG_006148.3: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.