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NR1H4 nuclear receptor subfamily 1 group H member 4 [ Canis lupus familiaris (dog) ]

Gene ID: 612928, updated on 23-Mar-2024

Summary

Official Symbol
NR1H4provided by VGNC
Official Full Name
nuclear receptor subfamily 1 group H member 4provided by VGNC
Primary source
VGNC:VGNC:43944
See related
Ensembl:ENSCAFG00845006398
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

Location:
chromosome: 15
Exon count:
16
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 15 NC_051819.1 (40161103..40272109)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 15 NC_006597.4 (39876387..39987365)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 15 NC_049236.1 (39799183..39910169)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 15 NC_049275.1 (39418531..39529420)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 15 NC_049756.1 (39525061..39636033)

Chromosome 15 - NC_051819.1Genomic Context describing neighboring genes Neighboring gene SCY1 like pseudokinase 2 Neighboring gene solute carrier family 17 member 8 Neighboring gene uncharacterized LOC119868497 Neighboring gene uncharacterized LOC119881749 Neighboring gene protein lin-28 homolog A-like Neighboring gene growth arrest specific 2 like 3 Neighboring gene anoctamin 4

Genomic regions, transcripts, and products

Pathways from PubChem

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051819.1 Reference ROS_Cfam_1.0

    Range
    40161103..40272109
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038688387.1XP_038544315.1  bile acid receptor isoform X4

    UniProtKB/TrEMBL
    A0A8I3RTA2
    Related
    ENSCAFP00845008869.1, ENSCAFT00845011357.1
    Conserved Domains (2) summary
    cd06936
    Location:247467
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124207
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  2. XM_038688386.1XP_038544314.1  bile acid receptor isoform X3

    UniProtKB/TrEMBL
    A0A8C0LJE0, A0A8C0S616, A0A8P0STP9
    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  3. XM_038688382.1XP_038544310.1  bile acid receptor isoform X3

    UniProtKB/TrEMBL
    A0A8C0LJE0, A0A8C0S616, A0A8P0STP9
    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  4. XM_038688384.1XP_038544312.1  bile acid receptor isoform X3

    UniProtKB/TrEMBL
    A0A8C0LJE0, A0A8C0S616, A0A8P0STP9
    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  5. XM_038688385.1XP_038544313.1  bile acid receptor isoform X3

    UniProtKB/TrEMBL
    A0A8C0LJE0, A0A8C0S616, A0A8P0STP9
    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  6. XM_038688383.1XP_038544311.1  bile acid receptor isoform X3

    UniProtKB/TrEMBL
    A0A8C0LJE0, A0A8C0S616, A0A8P0STP9
    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  7. XM_038688380.1XP_038544308.1  bile acid receptor isoform X1

    UniProtKB/TrEMBL
    A0A8C0R707, A0A8C0S6D2
    Conserved Domains (2) summary
    cd06936
    Location:260480
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cl02596
    Location:133220
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
  8. XM_038688381.1XP_038544309.1  bile acid receptor isoform X2

    UniProtKB/TrEMBL
    A0A8I3N2S7, A0A8P0N9A5
    Related
    ENSCAFP00845008917.1, ENSCAFT00845011416.1
    Conserved Domains (2) summary
    cd06936
    Location:256476
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:133216
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049275.1 Alternate UMICH_Zoey_3.1

    Range
    39418531..39529420
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038496396.1XP_038352324.1  bile acid receptor isoform X4

    Conserved Domains (2) summary
    cd06936
    Location:247467
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124207
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  2. XM_038496395.1XP_038352323.1  bile acid receptor isoform X3

    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  3. XM_038496391.1XP_038352319.1  bile acid receptor isoform X3

    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  4. XM_038496393.1XP_038352321.1  bile acid receptor isoform X3

    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  5. XM_038496394.1XP_038352322.1  bile acid receptor isoform X3

    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  6. XM_038496392.1XP_038352320.1  bile acid receptor isoform X3

    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  7. XM_038496389.1XP_038352317.1  bile acid receptor isoform X1

    Conserved Domains (2) summary
    cd06936
    Location:260480
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cl02596
    Location:133220
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
  8. XM_038496390.1XP_038352318.1  bile acid receptor isoform X2

    Conserved Domains (2) summary
    cd06936
    Location:256476
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:133216
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

    Range
    39525061..39636033
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038622718.1XP_038478646.1  bile acid receptor isoform X3

    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  2. XM_038622714.1XP_038478642.1  bile acid receptor isoform X3

    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  3. XM_038622719.1XP_038478647.1  bile acid receptor isoform X4

    Conserved Domains (2) summary
    cd06936
    Location:247467
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124207
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  4. XM_038622716.1XP_038478644.1  bile acid receptor isoform X3

    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  5. XM_038622717.1XP_038478645.1  bile acid receptor isoform X3

    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  6. XM_038622715.1XP_038478643.1  bile acid receptor isoform X3

    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  7. XM_038622712.1XP_038478640.1  bile acid receptor isoform X1

    Conserved Domains (2) summary
    cd06936
    Location:260480
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cl02596
    Location:133220
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
  8. XM_038622713.1XP_038478641.1  bile acid receptor isoform X2

    Conserved Domains (2) summary
    cd06936
    Location:256476
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:133216
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

    Range
    39799183..39910169
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038558798.1XP_038414726.1  bile acid receptor isoform X4

    UniProtKB/TrEMBL
    A0A8I3RTA2
    Conserved Domains (2) summary
    cd06936
    Location:247467
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124207
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  2. XM_038558797.1XP_038414725.1  bile acid receptor isoform X3

    UniProtKB/TrEMBL
    A0A8C0LJE0, A0A8C0S616, A0A8P0STP9
    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  3. XM_038558793.1XP_038414721.1  bile acid receptor isoform X3

    UniProtKB/TrEMBL
    A0A8C0LJE0, A0A8C0S616, A0A8P0STP9
    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  4. XM_038558795.1XP_038414723.1  bile acid receptor isoform X3

    UniProtKB/TrEMBL
    A0A8C0LJE0, A0A8C0S616, A0A8P0STP9
    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  5. XM_038558796.1XP_038414724.1  bile acid receptor isoform X3

    UniProtKB/TrEMBL
    A0A8C0LJE0, A0A8C0S616, A0A8P0STP9
    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  6. XM_038558794.1XP_038414722.1  bile acid receptor isoform X3

    UniProtKB/TrEMBL
    A0A8C0LJE0, A0A8C0S616, A0A8P0STP9
    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  7. XM_038558791.1XP_038414719.1  bile acid receptor isoform X1

    UniProtKB/TrEMBL
    A0A8C0R707, A0A8C0S6D2
    Conserved Domains (2) summary
    cd06936
    Location:260480
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cl02596
    Location:133220
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
  8. XM_038558792.1XP_038414720.1  bile acid receptor isoform X2

    UniProtKB/TrEMBL
    A0A8I3N2S7, A0A8P0N9A5
    Conserved Domains (2) summary
    cd06936
    Location:256476
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:133216
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    39876387..39987365
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038450621.1XP_038306549.1  bile acid receptor isoform X4

    UniProtKB/TrEMBL
    A0A8I3RTA2
    Conserved Domains (2) summary
    cd06936
    Location:247467
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124207
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  2. XM_038450614.1XP_038306542.1  bile acid receptor isoform X3

    UniProtKB/TrEMBL
    A0A8C0LJE0, A0A8C0S616, A0A8P0STP9
    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  3. XM_038450578.1XP_038306506.1  bile acid receptor isoform X3

    UniProtKB/TrEMBL
    A0A8C0LJE0, A0A8C0S616, A0A8P0STP9
    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  4. XM_022403402.2XP_022259110.1  bile acid receptor isoform X3

    UniProtKB/TrEMBL
    A0A8C0LJE0, A0A8C0S616, A0A8P0STP9
    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  5. XM_038450605.1XP_038306533.1  bile acid receptor isoform X3

    UniProtKB/TrEMBL
    A0A8C0LJE0, A0A8C0S616, A0A8P0STP9
    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  6. XM_847866.6XP_852959.2  bile acid receptor isoform X3

    UniProtKB/TrEMBL
    A0A8C0LJE0, A0A8C0S616, A0A8P0STP9
    Conserved Domains (2) summary
    cd06936
    Location:251471
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:124211
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers
  7. XM_861529.5XP_866622.2  bile acid receptor isoform X1

    UniProtKB/TrEMBL
    A0A8C0R707, A0A8C0S6D2
    Conserved Domains (2) summary
    cd06936
    Location:260480
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cl02596
    Location:133220
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
  8. XM_005629274.3XP_005629331.1  bile acid receptor isoform X2

    UniProtKB/TrEMBL
    A0A8I3N2S7, A0A8P0N9A5
    Conserved Domains (2) summary
    cd06936
    Location:256476
    NR_LBD_Fxr; The ligand binding domain of Farnesoid X receptor:a member of the nuclear receptor superfamily of ligand-activated transcription factors
    cd06962
    Location:133216
    NR_DBD_FXR; DNA-binding domain of Farnesoid X receptor (FXR) family is composed of two C4-type zinc fingers