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ATF3 activating transcription factor 3 [ Canis lupus familiaris (dog) ]

Gene ID: 612911, updated on 5-Mar-2024

Summary

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Official Symbol
ATF3provided by VGNC
Official Full Name
activating transcription factor 3provided by VGNC
Primary source
VGNC:VGNC:38209
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 7 NC_051811.1 (10490061..10500881)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 7 NC_006589.4 (10359482..10370301)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 7 NC_049228.1 (10637865..10648720)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 7 NC_049267.1 (10412838..10423650)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 7 NC_049748.1 (10514041..10524904)

Chromosome 7 - NC_051811.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102155131 Neighboring gene uncharacterized LOC102155202 Neighboring gene uncharacterized LOC106559018 Neighboring gene uncharacterized LOC119872499 Neighboring gene uncharacterized LOC102155437 Neighboring gene golgi associated RAB2 interactor family member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclic AMP-dependent transcription factor ATF-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051811.1 Reference ROS_Cfam_1.0

    Range
    10490061..10500881
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038670935.1 → XP_038526863.1  cyclic AMP-dependent transcription factor ATF-3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KM02, A0A8C0MEL6, A0A8C0PL55
    Conserved Domains (1) summary
    cd14722
    Location:96 → 149
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain

  2. XM_038670936.1 → XP_038526864.1  cyclic AMP-dependent transcription factor ATF-3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KM02, A0A8C0MEL6, A0A8C0PL55
    Conserved Domains (1) summary
    cd14722
    Location:96 → 149
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain

  3. XM_038670934.1 → XP_038526862.1  cyclic AMP-dependent transcription factor ATF-3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PL55
    Conserved Domains (1) summary
    cd14722
    Location:101 → 154
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049267.1 Alternate UMICH_Zoey_3.1

    Range
    10412838..10423650
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038480763.1 → XP_038336691.1  cyclic AMP-dependent transcription factor ATF-3 isoform X2

    Conserved Domains (1) summary
    cd14722
    Location:96 → 149
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain

  2. XM_038480764.1 → XP_038336692.1  cyclic AMP-dependent transcription factor ATF-3 isoform X2

    Conserved Domains (1) summary
    cd14722
    Location:96 → 149
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain

  3. XM_038480762.1 → XP_038336690.1  cyclic AMP-dependent transcription factor ATF-3 isoform X1

    Conserved Domains (1) summary
    cd14722
    Location:101 → 154
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049748.1 Alternate UNSW_CanFamBas_1.0

    Range
    10514041..10524904
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038606241.1 → XP_038462169.1  cyclic AMP-dependent transcription factor ATF-3 isoform X2

    Conserved Domains (1) summary
    cd14722
    Location:96 → 149
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain

  2. XM_038606242.1 → XP_038462170.1  cyclic AMP-dependent transcription factor ATF-3 isoform X2

    Conserved Domains (1) summary
    cd14722
    Location:96 → 149
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain

  3. XM_038606240.1 → XP_038462168.1  cyclic AMP-dependent transcription factor ATF-3 isoform X1

    Conserved Domains (1) summary
    cd14722
    Location:101 → 154
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049228.1 Alternate UU_Cfam_GSD_1.0

    Range
    10637865..10648720
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038542084.1 → XP_038398012.1  cyclic AMP-dependent transcription factor ATF-3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KM02, A0A8C0MEL6, A0A8C0PL55
    Conserved Domains (1) summary
    cd14722
    Location:96 → 149
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain

  2. XM_038542085.1 → XP_038398013.1  cyclic AMP-dependent transcription factor ATF-3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KM02, A0A8C0MEL6, A0A8C0PL55
    Conserved Domains (1) summary
    cd14722
    Location:96 → 149
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain

  3. XM_038542083.1 → XP_038398011.1  cyclic AMP-dependent transcription factor ATF-3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PL55
    Conserved Domains (1) summary
    cd14722
    Location:101 → 154
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006589.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    10359482..10370301
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_847382.6 → XP_852475.1  cyclic AMP-dependent transcription factor ATF-3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KM02, A0A8C0MEL6, A0A8C0PL55
    Conserved Domains (1) summary
    cd14722
    Location:96 → 149
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain

  2. XM_014115083.3 → XP_013970558.1  cyclic AMP-dependent transcription factor ATF-3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KM02, A0A8C0MEL6, A0A8C0PL55
    Conserved Domains (1) summary
    cd14722
    Location:96 → 149
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain

  3. XM_022420880.2 → XP_022276588.1  cyclic AMP-dependent transcription factor ATF-3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PL55
    Conserved Domains (1) summary
    cd14722
    Location:101 → 154
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein
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