WNT16 Wnt family member 16 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: WNT16provided by VGNC
Official Full Name: Wnt family member 16provided by VGNC
Primary source: VGNC:VGNC:49699
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 14

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	14	NC_051818.1 (59417524..59431676)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	14	NC_006596.4 (58802351..58811862)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	14	NC_049235.1 (59513424..59528123)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	14	NC_049274.1 (59515494..59524990)

Chromosome 14 - NC_051818.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables cytokine activity	IEA Inferred from Electronic Annotation more info	PubMed
enables frizzled binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in canonical Wnt signaling pathway	IEA Inferred from Electronic Annotation more info	PubMed
involved_in cell fate commitment	IEA Inferred from Electronic Annotation more info	PubMed
involved_in multicellular organism development	IEA Inferred from Electronic Annotation more info	PubMed
involved_in neuron differentiation	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in extracellular region	IEA Inferred from Electronic Annotation more info	PubMed
located_in extracellular space	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: LOW QUALITY PROTEIN: protein Wnt-16; protein Wnt-16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051818.1 Reference ROS_Cfam_1.0

Range

59417524..59431676

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038685959.1 → XP_038541887.1 protein Wnt-16 isoform X1

Conserved Domains (2) summary

PHA03247
Location:6 → 172

PHA03247; large tegument protein UL36; Provisional

cd19344
Location:263 → 580

Wnt_Wnt16; Wnt domain found in protein Wnt-16 and similar proteins

Alternate UMICH_Zoey_3.1

Genomic

NC_049274.1 Alternate UMICH_Zoey_3.1

Range

59515494..59524990

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038494100.1 → XP_038350028.1 LOW QUALITY PROTEIN: protein Wnt-16 isoform X2

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049235.1 Alternate UU_Cfam_GSD_1.0

Range

59513424..59528123

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038556355.1 → XP_038412283.1 protein Wnt-16 isoform X1

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006596.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

58802351..58811862

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038434744.1 → XP_038290672.1 protein Wnt-16 isoform X3

UniProtKB/TrEMBL

A0A8I3RW54, A0A8P0N6D4

Conserved Domains (1) summary

cd19344
Location:52 → 369

Wnt_Wnt16; Wnt domain found in protein Wnt-16 and similar proteins